KEGG PATHWAY: fcd04140

KEGG

PATHWAY: fcd04140

Entry

fcd04140                    Pathway

Name

Autophagy - animal - Folsomia candida

Description

Autophagy (or macroautophagy) is a cellular catabolic pathway involving in protein degradation, organelle turnover, and non-selective breakdown of cytoplasmic components, which is evolutionarily conserved among eukaryotes and exquisitely regulated. This progress initiates with production of the autophagosome, a double-membrane intracellular structure of reticular origin that engulfs cytoplasmic contents and ultimately fuses with lysosomes for cargo degradation. Autophagy is regulated in response to extra- or intracellular stress and signals such as starvation, growth factor deprivation and ER stress. Constitutive level of autophagy plays an important role in cellular homeostasis and maintains quality control of essential cellular components.

Class

Cellular Processes; Transport and catabolism

Pathway map

Autophagy - animal

Other DBs

GO:

Organism

Folsomia candida [GN:fcd]

Gene

insulin-like [KO:K04526]

insulin receptor substrate 1-like isoform X1 [KO:K16172]

phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like [KO:K00922] [EC:2.7.1.153]

phosphatidylinositol 3-kinase regulatory subunit alpha-like [KO:K02649]

3-phosphoinositide-dependent protein kinase 1-like [KO:K06276] [EC:2.7.11.1]

RAC-beta serine/threonine-protein kinase-like [KO:K04456] [EC:2.7.11.1]

phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN-like [KO:K01110] [EC:3.1.3.16 3.1.3.48 3.1.3.67]

GTPase HRas [KO:K07827]

ras-related protein M-Ras-like [KO:K07831]

ras-like protein 2 [KO:K07830]

dual specificity mitogen-activated protein kinase kinase dSOR1-like isoform X1 [KO:K04368] [EC:2.7.12.2]

mitogen-activated protein kinase 1-like [KO:K04371] [EC:2.7.11.24]

mitogen-activated protein kinase 5-like [KO:K04371] [EC:2.7.11.24]

mitogen-activated protein kinase 5-like [KO:K04371] [EC:2.7.11.24]

mitogen-activated protein kinase 5-like [KO:K04371] [EC:2.7.11.24]

hypoxia-inducible factor 1-alpha-like isoform X1 [KO:K08268]

hypoxia-inducible factor 1-alpha-like [KO:K08268]

tuberin-like [KO:K07207]

hamartin-like isoform X1 [KO:K07206]

uncharacterized protein LOC110857005 [KO:K15464]

GTP-binding protein Rheb-like [KO:K07208]

GTP-binding protein Rheb-like [KO:K07208]

regulatory-associated protein of mTOR-like isoform X1 [KO:K07204]

serine/threonine-protein kinase mTOR-like [KO:K07203] [EC:2.7.11.1]

target of rapamycin complex subunit lst8-like [KO:K08266]

ribosomal protein S6 kinase beta-1-like isoform X1 [KO:K04688] [EC:2.7.11.1]

ribosomal protein S6 kinase beta-1-like [KO:K04688] [EC:2.7.11.1]

immunoglobulin-binding protein 1-like [KO:K17606]

immunoglobulin-binding protein 1-like [KO:K17606]

serine/threonine-protein phosphatase 2A catalytic subunit beta isoform [KO:K04382] [EC:3.1.3.16]

serine/threonine-protein kinase unc-51-like [KO:K08269] [EC:2.7.11.1]

autophagy-related protein 13 homolog [KO:K08331]

autophagy-related protein 101-like [KO:K19730]

autophagy-related protein 2 homolog A-like [KO:K17906]

WD repeat domain phosphoinositide-interacting protein 2-like [KO:K17908]

WD repeat domain phosphoinositide-interacting protein 2-like isoform X1 [KO:K17908]

WD repeat domain phosphoinositide-interacting protein 3-like [KO:K22991]

WD repeat domain phosphoinositide-interacting protein 4-like [KO:K22991]

autophagy-related protein 9A-like [KO:K17907]

uncharacterized protein LOC110852861 isoform X1 [KO:K21245]

ras-related protein Rab-8A-like [KO:K07901]

ras-related protein Rab-39B-like [KO:K07925]

protein ref(2)P-like [KO:K14381]

serine/threonine-protein kinase TBK1-like [KO:K05410] [EC:2.7.11.10]

ras-related protein Rab-1A-like [KO:K07874]

ras-related protein ORAB-1-like [KO:K07874]

ras-related protein RIC1-like [KO:K07874]

ras-related GTP-binding protein A-like [KO:K16185]

ras-related GTP-binding protein C-like [KO:K16186]

serine/threonine-protein kinase stk11-like [KO:K07298] [EC:2.7.11.1]

5'-AMP-activated protein kinase catalytic subunit alpha-2-like [KO:K07198] [EC:2.7.11.31]

5'-AMP-activated protein kinase catalytic subunit alpha-2-like isoform X1 [KO:K07198] [EC:2.7.11.31]

cAMP-dependent protein kinase catalytic subunit-like [KO:K04345] [EC:2.7.11.11]

cAMP-dependent protein kinase catalytic subunit isoform X1 [KO:K04345] [EC:2.7.11.11]

cAMP-dependent protein kinase catalytic subunit-like [KO:K04345] [EC:2.7.11.11]

cAMP-dependent protein kinase catalytic subunit-like [KO:K04345] [EC:2.7.11.11]

cAMP-dependent protein kinase catalytic subunit alpha-like [KO:K04345] [EC:2.7.11.11]

stress-activated protein kinase JNK-like [KO:K04440] [EC:2.7.11.24]

beclin-1-like protein [KO:K08334]

nuclear receptor-binding factor 2-like [KO:K21246]

phosphoinositide 3-kinase regulatory subunit 4-like [KO:K08333] [EC:2.7.11.1]

phosphatidylinositol 3-kinase catalytic subunit type 3-like [KO:K00914] [EC:2.7.1.137]

beclin 1-associated autophagy-related key regulator-like isoform X1 [KO:K17889]

TNF receptor-associated factor 6-like [KO:K03175] [EC:2.3.2.27]

uncharacterized protein LOC110849466 [KO:K21247]

vacuole membrane protein 1-like isoform X1 [KO:K21248]

vacuole membrane protein 1-like [KO:K21248]

uncharacterized protein LOC110861528 [KO:K21249]

endophilin-B1-like [KO:K11248]

run domain Beclin-1-interacting and cysteine-rich domain-containing protein-like [KO:K19330]

calcium/calmodulin-dependent protein kinase kinase 1-like [KO:K07359] [EC:2.7.11.17]

mitogen-activated protein kinase kinase kinase 7-like [KO:K04427] [EC:2.7.11.25]

interleukin-1 receptor-associated kinase 4-like [KO:K08852] [EC:2.7.11.1 3.1.26.-]

serine/threonine-protein kinase/endoribonuclease IRE1-like [KO:K08852] [EC:2.7.11.1 3.1.26.-]

probable serine/threonine-protein kinase irlA [KO:K08852] [EC:2.7.11.1 3.1.26.-]

serine/threonine-protein kinase ppk4-like [KO:K08852] [EC:2.7.11.1 3.1.26.-]

high mobility group protein DSP1-like [KO:K10802]

eIF-2-alpha kinase GCN2-like [KO:K16196] [EC:2.7.11.1]

eukaryotic translation initiation factor 2 subunit 1-like [KO:K03237]

myotubularin-related protein 3-like [KO:K18082] [EC:3.1.3.48 3.1.3.64 3.1.3.95]

uncharacterized protein LOC110850796 [KO:K18086] [EC:3.1.3.64 3.1.3.95]

autophagy protein 12-like [KO:K08336]

autophagy protein 5-like [KO:K08339]

autophagy-related protein 16-1-like isoform X1 [KO:K17890]

ubiquitin-like modifier-activating enzyme ATG7 [KO:K08337]

ubiquitin-like-conjugating enzyme ATG3 [KO:K08343]

ras-related protein Rab-33B-like [KO:K07920]

gamma-aminobutyric acid receptor-associated protein [KO:K08341]

microtubule-associated proteins 1A/1B light chain 3A-like [KO:K10435]

microtubule-associated proteins 1A/1B light chain 3C-like [KO:K10435]

cysteine protease ATG4B-like [KO:K08342] [EC:3.4.22.-]

WD repeat and FYVE domain-containing protein 3-like [KO:K22262]

ubiquitin-60S ribosomal protein L40 [KO:K02927]

ubiquitin-like [KO:K02977]

polyubiquitin-C isoform X1 [KO:K08770]

synaptosomal-associated protein 29-like [KO:K08509]

synaptobrevin homolog YKT6-like [KO:K08516]

syntaxin-7-like isoform X1 [KO:K08488]

ectopic P granules protein 5 homolog [KO:K23883]

ectopic P granules protein 5 homolog [KO:K23883]

uncharacterized protein LOC110851223 [KO:K23282]

vacuolar protein sorting-associated protein 11 homolog [KO:K20179]

vacuolar protein sorting-associated protein 16 homolog [KO:K20180]

vacuolar protein sorting-associated protein 18 homolog [KO:K20181]

vacuolar protein sorting-associated protein 33A-like [KO:K20182]

vam6/Vps39-like protein [KO:K20183]

vacuolar protein sorting-associated protein 41 homolog [KO:K20184]

Golgi reassembly-stacking protein 2-like [KO:K26797]

ras-related protein Rab-7a-like [KO:K07897]

ras-related protein Rab-7a-like [KO:K07897]

lysosome-associated membrane glycoprotein 1-like [KO:K06528]

lysosome-associated membrane glycoprotein 1-like [KO:K06528]

lysosomal aspartic protease-like [KO:K01379] [EC:3.4.23.5]

cathepsin L1-like [KO:K01365] [EC:3.4.22.15]

digestive cysteine proteinase 3-like [KO:K01365] [EC:3.4.22.15]

ervatamin-B-like [KO:K01365] [EC:3.4.22.15]

cathepsin L1-like [KO:K01365] [EC:3.4.22.15]

cathepsin L1-like [KO:K01365] [EC:3.4.22.15]

cathepsin S-like [KO:K01365] [EC:3.4.22.15]

cathepsin L1-like [KO:K01365] [EC:3.4.22.15]

ervatamin-B-like [KO:K01365] [EC:3.4.22.15]

cathepsin L-like [KO:K01365] [EC:3.4.22.15]

cathepsin L1-like [KO:K01365] [EC:3.4.22.15]

ervatamin-B-like [KO:K01365] [EC:3.4.22.15]

cathepsin B-like [KO:K01363] [EC:3.4.22.1]

cathepsin B-like [KO:K01363] [EC:3.4.22.1]

cathepsin B-like [KO:K01363] [EC:3.4.22.1]

gut-specific cysteine proteinase-like [KO:K01363] [EC:3.4.22.1]

cathepsin B-like [KO:K01363] [EC:3.4.22.1]

Compound

GDP

GTP

Phosphatidylethanolamine

1-Phosphatidyl-D-myo-inositol

1-Phosphatidyl-1D-myo-inositol 3-phosphate

Phosphatidylinositol-3,4,5-trisphosphate

Reference

Authors

Meijer AJ, Codogno P.

Title

Regulation and role of autophagy in mammalian cells.

Journal

Int J Biochem Cell Biol 36:2445-62 (2004)
DOI:10.1016/j.biocel.2004.02.002

Reference

Authors

Deretic V.

Title

Autophagy in innate and adaptive immunity.

Journal

Trends Immunol 26:523-8 (2005)
DOI:10.1016/j.it.2005.08.003

Reference

Authors

Levine B, Yuan J.

Title

Autophagy in cell death: an innocent convict?

Journal

J Clin Invest 115:2679-88 (2005)
DOI:10.1172/JCI26390

Reference

Authors

Tanida I, Ueno T, Kominami E.

Title

LC3 conjugation system in mammalian autophagy.

Journal

Int J Biochem Cell Biol 36:2503-18 (2004)
DOI:10.1016/j.biocel.2004.05.009

Reference

Authors

Lum JJ, DeBerardinis RJ, Thompson CB.

Title

Autophagy in metazoans: cell survival in the land of plenty.

Journal

Nat Rev Mol Cell Biol 6:439-48 (2005)
DOI:10.1038/nrm1660

Reference

Authors

Reggiori F, Klionsky DJ.

Title

Autophagosomes: biogenesis from scratch?

Journal

Curr Opin Cell Biol 17:415-22 (2005)
DOI:10.1016/j.ceb.2005.06.007

Reference

Authors

Klionsky DJ, Emr SD.

Title

Autophagy as a regulated pathway of cellular degradation.

Journal

Science 290:1717-21 (2000)
DOI:10.1126/science.290.5497.1717

Reference

Authors

Bechet D, Tassa A, Taillandier D, Combaret L, Attaix D.

Title

Lysosomal proteolysis in skeletal muscle.

Journal

Int J Biochem Cell Biol 37:2098-114 (2005)
DOI:10.1016/j.biocel.2005.02.029

Reference

Authors

He C, Klionsky DJ

Title

Regulation mechanisms and signaling pathways of autophagy.

Journal

Annu Rev Genet 43:67-93 (2009)
DOI:10.1146/annurev-genet-102808-114910

Reference

Authors

Yang Z, Klionsky DJ

Title

An overview of the molecular mechanism of autophagy.

Journal

Curr Top Microbiol Immunol 335:1-32 (2009)
DOI:10.1007/978-3-642-00302-8_1

Reference

Authors

Yang Z, Klionsky DJ

Title

Mammalian autophagy: core molecular machinery and signaling regulation.

Journal

Curr Opin Cell Biol 22:124-31 (2010)
DOI:10.1016/j.ceb.2009.11.014

Reference

Authors

Chen Y, Klionsky DJ

Title

The regulation of autophagy - unanswered questions.

Journal

J Cell Sci 124:161-70 (2011)
DOI:10.1242/jcs.064576

Reference

Authors

Mizushima N, Yoshimori T, Ohsumi Y

Title

The role of Atg proteins in autophagosome formation.

Journal

Annu Rev Cell Dev Biol 27:107-32 (2011)
DOI:10.1146/annurev-cellbio-092910-154005

Reference

Authors

Russell RC, Yuan HX, Guan KL

Title

Autophagy regulation by nutrient signaling.

Journal

Cell Res 24:42-57 (2014)
DOI:10.1038/cr.2013.166

Reference

Authors

Noda NN, Fujioka Y

Title

Atg1 family kinases in autophagy initiation.

Journal

Cell Mol Life Sci 72:3083-96 (2015)
DOI:10.1007/s00018-015-1917-z

Related
pathway

Protein processing in endoplasmic reticulum

Lysosome

mTOR signaling pathway

KO pathway

LinkDB

DBGET integrated database retrieval system