KEGG   PATHWAY: ggo04146
Entry
ggo04146                    Pathway                                
Name
Peroxisome - Gorilla gorilla gorilla (western lowland gorilla)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
ggo04146  Peroxisome
ggo04146

Other DBs
GO: 0005777
Organism
Gorilla gorilla gorilla (western lowland gorilla) [GN:ggo]
Gene
101140433  PEX16; peroxisomal biogenesis factor 16 isoform X1 [KO:K13335]
101138098  PEX3; peroxisomal biogenesis factor 3 [KO:K13336]
101137886  PEX19; peroxisomal biogenesis factor 19 isoform X1 [KO:K13337]
101141800  ABCD3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
101141766  PEX1; peroxisomal ATPase PEX1 isoform X1 [KO:K13338]
101145685  PEX6; peroxisome biogenesis factor 6 isoform X1 [KO:K13339]
101145706  PEX26; peroxisome assembly protein 26 isoform X1 [KO:K13340]
101144472  PEX7; peroxisomal biogenesis factor 7 isoform X1 [KO:K13341]
101148969  PEX5; peroxisomal biogenesis factor 5 isoform X2 [KO:K13342]
101150789  PEX5L; PEX5-related protein isoform X4 [KO:K13342]
101153752  PEX14; peroxisomal membrane protein PEX14 isoform X1 [KO:K13343]
101153064  PEX13; peroxisome biogenesis factor 13 isoform X1 [KO:K13344]
101145196  PEX12; peroxisome assembly protein 12 [KO:K13345]
101129701  PEX10; peroxisome biogenesis factor 10 isoform X2 [KO:K13346]
101134494  PEX2; peroxisome biogenesis factor 2 [KO:K06664]
101123945  PXMP2; peroxisomal membrane protein 2 isoform X2 [KO:K13347]
101141082  MPV17; protein Mpv17 isoform X1 [KO:K13348]
101135641  MPV17L2; mpv17-like protein 2 [KO:K13348]
129527622  MPV17L; mpv17-like protein isoform X3 [KO:K13349]
101142400  PXMP4; peroxisomal membrane protein 4 isoform X1 [KO:K13350]
101145909  PEX11A; peroxisomal membrane protein 11A isoform X1 [KO:K13351]
101135235  PEX11B; peroxisomal membrane protein 11B isoform X1 [KO:K13352]
101145075  PEX11G; peroxisomal membrane protein 11C isoform X1 [KO:K13353]
101148460  SLC25A17; peroxisomal membrane protein PMP34 isoform X1 [KO:K13354]
101130205  HACL1; 2-hydroxyacyl-CoA lyase 1 isoform X2 [KO:K12261] [EC:4.1.2.63]
101150575  AMACR; alpha-methylacyl-CoA racemase isoform X1 [KO:K01796] [EC:5.1.99.4]
109025269  PHYH; phytanoyl-CoA dioxygenase, peroxisomal [KO:K00477] [EC:1.14.11.18]
101152360  ACOX3; peroxisomal acyl-coenzyme A oxidase 3 [KO:K00232] [EC:1.3.3.6]
101145668  ACOX1; peroxisomal acyl-coenzyme A oxidase 1 isoform X2 [KO:K00232] [EC:1.3.3.6]
101135855  ACOX2; peroxisomal acyl-coenzyme A oxidase 2 isoform X2 [KO:K10214] [EC:1.17.99.3]
101129538  HSD17B4; peroxisomal multifunctional enzyme type 2 isoform X1 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
101143883  SCP2; sterol carrier protein 2 isoform X1 [KO:K08764] [EC:2.3.1.176]
101140183  BAAT; bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
101130472  EHHADH; peroxisomal bifunctional enzyme isoform X1 [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
101141231  ACAA1; 3-ketoacyl-CoA thiolase, peroxisomal [KO:K07513] [EC:2.3.1.16]
101152371  DECR2; peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] isoform X3 [KO:K13237] [EC:1.3.1.124]
101147000  ECH1; delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X1 [KO:K12663] [EC:5.3.3.21]
101125363  ABCD1; ATP-binding cassette sub-family D member 1 [KO:K05675] [EC:7.6.2.4]
101126830  ABCD2; ATP-binding cassette sub-family D member 2 isoform X1 [KO:K05676] [EC:7.6.2.4]
101145397  ABCD4; lysosomal cobalamin transporter ABCD4 isoform X2 [KO:K05678] [EC:7.6.2.8]
101132890  SLC27A2; long-chain fatty acid transport protein 2 isoform X1 [KO:K08746] [EC:6.2.1.- 6.2.1.3]
101128326  ACSL1; long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
101140072  ACSL5; long-chain-fatty-acid--CoA ligase 5 isoform X1 [KO:K01897] [EC:6.2.1.3]
101124906  ACSL3; fatty acid CoA ligase Acsl3 [KO:K01897] [EC:6.2.1.3]
101136532  ACSL4; long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
101130747  ACSL6; long-chain-fatty-acid--CoA ligase 6 isoform X1 [KO:K01897] [EC:6.2.1.3]
101141591  PECR; peroxisomal trans-2-enoyl-CoA reductase [KO:K07753] [EC:1.3.1.38]
101129887  ECI2; enoyl-CoA delta isomerase 2 isoform X1 [KO:K13239] [EC:5.3.3.8]
101146379  NUDT7; peroxisomal coenzyme A diphosphatase NUDT7 isoform X2 [KO:K17879] [EC:3.6.1.77]
101152753  NUDT12; NAD-capped RNA hydrolase NUDT12 [KO:K03426] [EC:3.6.1.22]
109024911  NUDT13; NAD(P)H pyrophosphatase NUDT13, mitochondrial isoform X1 [KO:K03426] [EC:3.6.1.22]
101144217  NUDT19; acyl-coenzyme A diphosphatase NUDT19 [KO:K13355] [EC:3.6.1.77]
101153013  ACOT8; acyl-coenzyme A thioesterase 8 isoform X1 [KO:K11992] [EC:3.1.2.27]
101151473  CRAT; carnitine O-acetyltransferase isoform X6 [KO:K00624] [EC:2.3.1.7]
101140286  CROT; peroxisomal carnitine O-octanoyltransferase isoform X1 [KO:K05940] [EC:2.3.1.137]
101136977  MLYCD; malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
101145496  GNPAT; dihydroxyacetone phosphate acyltransferase [KO:K00649] [EC:2.3.1.42]
101149685  AGPS; alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X1 [KO:K00803] [EC:2.5.1.26]
101145992  FAR1; fatty acyl-CoA reductase 1 isoform X1 [KO:K13356] [EC:1.2.1.84]
101130936  FAR2; fatty acyl-CoA reductase 2 isoform X1 [KO:K13356] [EC:1.2.1.84]
101134885  MVK; mevalonate kinase isoform X1 [KO:K00869] [EC:2.7.1.36]
101137635  PMVK; phosphomevalonate kinase isoform X1 [KO:K13273] [EC:2.7.4.2]
101152477  AGXT; alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
101127462  DAO; D-amino-acid oxidase isoform X1 [KO:K00273] [EC:1.4.3.3]
101134349  DDO; D-aspartate oxidase isoform X1 [KO:K00272] [EC:1.4.3.1]
101151172  IDH2; isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
101150530  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
101144152  PAOX; peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 [KO:K00308] [EC:1.5.3.13]
101145672  PIPOX; peroxisomal sarcosine oxidase isoform X2 [KO:K00306] [EC:1.5.3.1 1.5.3.7]
101153646  HMGCL; hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [KO:K01640] [EC:4.1.3.4]
101150462  HAO1; 2-Hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
101140070  HAO2; 2-Hydroxyacid oxidase 2 isoform X2 [KO:K11517] [EC:1.1.3.15]
101134627  CAT; catalase [KO:K03781] [EC:1.11.1.6]
101152455  PRDX5; peroxiredoxin-5, mitochondrial isoform X1 [KO:K11187] [EC:1.11.1.24]
101127142  SOD1; superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
101146178  SOD2; superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
101134923  NOS2; nitric oxide synthase, inducible isoform X1 [KO:K13241] [EC:1.14.13.39]
101153165  PRDX1; peroxiredoxin-1 [KO:K13279] [EC:1.11.1.24]
101136750  EPHX2; bifunctional epoxide hydrolase 2 isoform X1 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
101151695  GSTK1; glutathione S-transferase kappa 1 isoform X1 [KO:K13299] [EC:2.5.1.18]
101138402  XDH; xanthine dehydrogenase/oxidase isoform X3 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
101144919  dehydrogenase/reductase SDR family member 4 isoform X1 [KO:K11147] [EC:1.1.-.-]
115930536  dehydrogenase/reductase SDR family member 4-like isoform X1 [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
ggo00071  Fatty acid degradation
ggo00120  Primary bile acid biosynthesis
ggo00230  Purine metabolism
ggo00564  Glycerophospholipid metabolism
ggo00565  Ether lipid metabolism
ggo00830  Retinol metabolism
ggo00900  Terpenoid backbone biosynthesis
ggo03320  PPAR signaling pathway
KO pathway
ko04146   
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