KEGG   PATHWAY: oeu00900
Entry
oeu00900                    Pathway                                
Name
Terpenoid backbone biosynthesis - Olea europaea var. sylvestris (wild olive)
Description
Terpenoids, also known as isoprenoids, are a large class of natural products consisting of isoprene (C5) units. There are two biosynthetic pathways, the mevalonate pathway [MD:M00095] and the non-mevalonate pathway or the MEP/DOXP pathway [MD:M00096], for the terpenoid building blocks: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). The action of prenyltransferases then generates higher-order building blocks: geranyl diphosphate (GPP), farsenyl diphosphate (FPP), and geranylgeranyl diphosphate (GGPP), which are the precursors of monoterpenoids (C10), sesquiterpenoids (C15), and diterpenoids (C20), respectively. Condensation of these building blocks gives rise to the precursors of sterols (C30) and carotenoids (C40). The MEP/DOXP pathway is absent in higher animals and fungi, but in green plants the MEP/DOXP and mevalonate pathways co-exist in separate cellular compartments. The MEP/DOXP pathway, operating in the plastids, is responsible for the formation of essential oil monoterpenes and linalyl acetate, some sesquiterpenes, diterpenes, and carotenoids and phytol. The mevalonate pathway, operating in the cytosol, gives rise to triterpenes, sterols, and most sesquiterpenes.
Class
Metabolism; Metabolism of terpenoids and polyketides
Pathway map
oeu00900  Terpenoid backbone biosynthesis
oeu00900

Module
oeu_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:oeu00900]
oeu_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:oeu00900]
oeu_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:oeu00900]
Other DBs
GO: 0009240 0016091
Organism
Olea europaea var. sylvestris (wild olive) [GN:oeu]
Gene
111373463  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
111369533  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic isoform X1 [KO:K01662] [EC:2.2.1.7]
111375809  probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1 [KO:K01662] [EC:2.2.1.7]
111408288  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
111382148  probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [KO:K01662] [EC:2.2.1.7]
111389272  1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic [KO:K00099] [EC:1.1.1.267]
111385010  1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic-like isoform X1 [KO:K00099] [EC:1.1.1.267]
111402205  1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic-like [KO:K00099] [EC:1.1.1.267]
111409805  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic-like isoform X1 [KO:K00991] [EC:2.7.7.60]
111379181  LOW QUALITY PROTEIN: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic-like [KO:K00991] [EC:2.7.7.60]
111398044  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like [KO:K00919] [EC:2.7.1.148]
111386662  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic-like [KO:K00919] [EC:2.7.1.148]
111407595  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [KO:K01770] [EC:4.6.1.12]
111369931  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic-like [KO:K03526] [EC:1.17.7.1 1.17.7.3]
111403548  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic-like [KO:K03526] [EC:1.17.7.1 1.17.7.3]
111380973  4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic-like [KO:K03527] [EC:1.17.7.4]
111381423  4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic-like [KO:K03527] [EC:1.17.7.4]
111385578  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
111402104  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
111390947  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
111387897  acetyl-CoA acetyltransferase, cytosolic 1-like isoform X1 [KO:K00626] [EC:2.3.1.9]
111379049  hydroxymethylglutaryl-CoA synthase-like [KO:K01641] [EC:2.3.3.10]
111407520  hydroxymethylglutaryl-CoA synthase [KO:K01641] [EC:2.3.3.10]
111368828  hydroxymethylglutaryl-CoA synthase [KO:K01641] [EC:2.3.3.10]
111401248  3-hydroxy-3-methylglutaryl-coenzyme A reductase-like [KO:K00021] [EC:1.1.1.34]
111376622  3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [KO:K00021] [EC:1.1.1.34]
111396750  3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [KO:K00021] [EC:1.1.1.34]
111409359  3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [KO:K00021] [EC:1.1.1.34]
111410512  3-hydroxy-3-methylglutaryl-coenzyme A reductase-like [KO:K00021] [EC:1.1.1.34]
111387406  3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [KO:K00021] [EC:1.1.1.34]
111396504  3-hydroxy-3-methylglutaryl-coenzyme A reductase-like [KO:K00021] [EC:1.1.1.34]
111387692  3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [KO:K00021] [EC:1.1.1.34]
111389341  mevalonate kinase-like [KO:K00869] [EC:2.7.1.36]
111385941  mevalonate kinase-like isoform X1 [KO:K00869] [EC:2.7.1.36]
111407417  phosphomevalonate kinase, peroxisomal-like [KO:K00938] [EC:2.7.4.2]
111382925  phosphomevalonate kinase, peroxisomal-like [KO:K00938] [EC:2.7.4.2]
111408343  diphosphomevalonate decarboxylase MVD1, peroxisomal-like [KO:K01597] [EC:4.1.1.33]
111405372  diphosphomevalonate decarboxylase MVD2, peroxisomal-like isoform X1 [KO:K01597] [EC:4.1.1.33]
111381017  diphosphomevalonate decarboxylase MVD2, peroxisomal-like [KO:K01597] [EC:4.1.1.33]
111398337  uncharacterized protein LOC111398337 [KO:K06981] [EC:2.7.4.26]
111398921  uncharacterized protein LOC111398921 isoform X1 [KO:K06981] [EC:2.7.4.26]
111379751  isopentenyl-diphosphate Delta-isomerase I [KO:K01823] [EC:5.3.3.2]
111370918  isopentenyl-diphosphate Delta-isomerase I-like [KO:K01823] [EC:5.3.3.2]
111396906  farnesyl pyrophosphate synthase 1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
111382286  farnesyl pyrophosphate synthase 1-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
111387910  farnesyl pyrophosphate synthase 1-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
111402795  LOW QUALITY PROTEIN: farnesyl pyrophosphate synthase 1-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
111370217  solanesyl diphosphate synthase 3, chloroplastic/mitochondrial [KO:K14066] [EC:2.5.1.1]
111368146  geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111366749  heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111397715  heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111387124  heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111383560  geranylgeranyl pyrophosphate synthase, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111400235  geranylgeranyl pyrophosphate synthase, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111380635  geranylgeranyl pyrophosphate synthase, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111382803  geranylgeranyl pyrophosphate synthase, chloroplastic [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111412130  heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111401068  geranylgeranyl pyrophosphate synthase, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111394525  heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
111368875  probable solanesyl-diphosphate synthase 3, chloroplastic isoform X1 [KO:K05356] [EC:2.5.1.84 2.5.1.85]
111389251  probable solanesyl-diphosphate synthase 3, chloroplastic isoform X1 [KO:K05356] [EC:2.5.1.84 2.5.1.85]
111374720  solanesyl diphosphate synthase 2, chloroplastic-like [KO:K05356] [EC:2.5.1.84 2.5.1.85]
111397699  dehydrodolichyl diphosphate synthase 6-like [KO:K11778] [EC:2.5.1.87]
111394607  dehydrodolichyl diphosphate synthase complex subunit nus1 [KO:K11778] [EC:2.5.1.87]
111408971  dehydrodolichyl diphosphate synthase 6-like isoform X1 [KO:K11778] [EC:2.5.1.87]
111376885  dehydrodolichyl diphosphate synthase 2-like [KO:K11778] [EC:2.5.1.87]
111376888  dehydrodolichyl diphosphate synthase 2-like [KO:K11778] [EC:2.5.1.87]
111379510  dehydrodolichyl diphosphate synthase 2-like [KO:K11778] [EC:2.5.1.87]
111377648  dehydrodolichyl diphosphate synthase 2-like [KO:K11778] [EC:2.5.1.87]
111394843  geranylgeranyl diphosphate reductase, chloroplastic-like [KO:K10960] [EC:1.3.1.83 1.3.1.111]
111394844  geranylgeranyl diphosphate reductase, chloroplastic-like [KO:K10960] [EC:1.3.1.83 1.3.1.111]
111388353  geranylgeranyl diphosphate reductase, chloroplastic [KO:K10960] [EC:1.3.1.83 1.3.1.111]
111368363  isoprene synthase, chloroplastic-like [KO:K12742] [EC:4.2.3.27]
111383800  isoprene synthase, chloroplastic-like [KO:K12742] [EC:4.2.3.27]
111374106  isoprene synthase, chloroplastic-like [KO:K12742] [EC:4.2.3.27]
111408326  isoprene synthase, chloroplastic-like [KO:K12742] [EC:4.2.3.27]
111409583  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [KO:K05955] [EC:2.5.1.58 2.5.1.59]
111396929  protein farnesyltransferase subunit beta isoform X1 [KO:K05954] [EC:2.5.1.58]
111388434  CAAX prenyl protease 2 isoform X1 [KO:K08658] [EC:3.4.26.1]
111411716  CAAX prenyl protease 1 homolog [KO:K06013] [EC:3.4.24.84]
111377058  CAAX prenyl protease 1 homolog [KO:K06013] [EC:3.4.24.84]
111373346  protein-S-isoprenylcysteine O-methyltransferase A-like [KO:K00587] [EC:2.1.1.100]
111401163  protein-S-isoprenylcysteine O-methyltransferase A-like [KO:K00587] [EC:2.1.1.100]
111367915  isoprenylcysteine alpha-carbonyl methylesterase ICME [KO:K15889] [EC:3.1.1.-]
111389478  probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2 isoform X1 [KO:K15889] [EC:3.1.1.-]
111401093  farnesylcysteine lyase [KO:K05906] [EC:1.8.3.5 1.8.3.6]
111409485  sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating-like [KO:K15891] [EC:1.1.1.354]
111397266  uncharacterized protein LOC111397266 isoform X1 [KO:K15891] [EC:1.1.1.354]
111367046  probable phytol kinase 3, chloroplastic [KO:K15892] [EC:2.7.1.216]
111402577  probable phytol kinase 3, chloroplastic isoform X1 [KO:K15892] [EC:2.7.1.216]
111400761  probable phytol kinase 3, chloroplastic isoform X1 [KO:K15892] [EC:2.7.1.216]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00118  D-Glyceraldehyde 3-phosphate
C00129  Isopentenyl diphosphate
C00235  Dimethylallyl diphosphate
C00332  Acetoacetyl-CoA
C00341  Geranyl diphosphate
C00353  Geranylgeranyl diphosphate
C00356  (S)-3-Hydroxy-3-methylglutaryl-CoA
C00418  (R)-Mevalonate
C00448  trans,trans-Farnesyl diphosphate
C01107  (R)-5-Phosphomevalonate
C01126  (2E,6E)-Farnesol
C01143  (R)-5-Diphosphomevalonate
C01230  all-trans-Hexaprenyl diphosphate
C02321  cis-1,4-Polyisoprene
C03461  2-trans,6-trans-Farnesal
C04145  all-trans-Nonaprenyl diphosphate
C04146  all-trans-Octaprenyl diphosphate
C04216  all-trans-Heptaprenyl diphosphate
C04506  Protein C-terminal S-farnesyl-L-cysteine
C04574  di-trans,poly-cis-Undecaprenyl diphosphate
C04748  Protein C-terminal S-farnesyl-L-cysteine methyl ester
C05427  Phytyl diphosphate
C05859  ditrans,polycis-Polyprenyl diphosphate
C06081  Polyprenol
C11434  2-C-Methyl-D-erythritol 4-phosphate
C11435  4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol
C11436  2-Phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
C11437  1-Deoxy-D-xylulose 5-phosphate
C11453  2-C-Methyl-D-erythritol 2,4-cyclodiphosphate
C11811  1-Hydroxy-2-methyl-2-butenyl 4-diphosphate
C16521  Isoprene
C16826  2-cis,6-trans-Farnesyl diphosphate
C17432  all-trans-Decaprenyl diphosphate
C18321  trans,octacis-Decaprenyl diphosphate
C19691  Farnesylcysteine
C19760  2-cis,6-cis-Farnesyl diphosphate
C19852  tritrans,heptacis-Undecaprenyl diphosphate
C19853  trans,polycis-Polyprenyl diphosphate
C20120  S-Farnesyl protein
C20121  trans,trans-Farnesyl phosphate
C20345  Isopentenyl phosphate
C20847  (R)-Mevalonate 3-phosphate
C20848  (R)-Mevalonate 3,5-bisphosphate
C22453  trans-Anhydromevalonate 5-phosphate
Reference
  Authors
Lange BM, Ghassemian M.
  Title
Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism.
  Journal
Plant Mol Biol 51:925-48 (2003)
DOI:10.1023/A:1023005504702
Reference
  Authors
Saiki R, Nagata A, Kainou T, Matsuda H, Kawamukai M
  Title
Characterization of solanesyl and decaprenyl diphosphate synthases in mice and humans.
  Journal
FEBS J 272:5606-22 (2005)
DOI:10.1111/j.1742-4658.2005.04956.x
Reference
PMID:9858571
  Authors
Sato M, Sato K, Nishikawa S, Hirata A, Kato J, Nakano A
  Title
The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis.
  Journal
Mol Cell Biol 19:471-83 (1999)
DOI:10.1128/MCB.19.1.471
Reference
  Authors
Vannice JC, Skaff DA, Keightley A, Addo JK, Wyckoff GJ, Miziorko HM
  Title
Identification in Haloferax volcanii of phosphomevalonate decarboxylase and isopentenyl phosphate kinase as catalysts of the terminal enzyme reactions in an  archaeal alternate mevalonate pathway.
  Journal
J Bacteriol 196:1055-63 (2014)
DOI:10.1128/JB.01230-13
Related
pathway
oeu00010  Glycolysis / Gluconeogenesis
oeu00100  Steroid biosynthesis
oeu00130  Ubiquinone and other terpenoid-quinone biosynthesis
oeu00270  Cysteine and methionine metabolism
oeu00510  N-Glycan biosynthesis
oeu00902  Monoterpenoid biosynthesis
oeu00904  Diterpenoid biosynthesis
oeu00906  Carotenoid biosynthesis
oeu00908  Zeatin biosynthesis
oeu00909  Sesquiterpenoid and triterpenoid biosynthesis
KO pathway
ko00900   
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