KEGG   PATHWAY: pcad00010
Entry
pcad00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Physeter catodon (sperm whale)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pcad00010  Glycolysis / Gluconeogenesis
pcad00010

Module
pcad_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pcad00010]
pcad_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pcad00010]
pcad_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pcad00010]
pcad_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pcad00010]
Other DBs
GO: 0006096 0006094
Organism
Physeter catodon (sperm whale) [GN:pcad]
Gene
102986420  HK3; hexokinase-3 [KO:K00844] [EC:2.7.1.1]
102983383  hexokinase-2 isoform X3 [KO:K00844] [EC:2.7.1.1]
114484525  hexokinase-1-like [KO:K00844] [EC:2.7.1.1]
102983587  HKDC1; hexokinase HKDC1 isoform X11 [KO:K00844] [EC:2.7.1.1]
102983293  hexokinase-1 [KO:K00844] [EC:2.7.1.1]
102974757  GCK; LOW QUALITY PROTEIN: hexokinase-4 [KO:K12407] [EC:2.7.1.2]
102983432  GPI; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
102982394  PFKM; ATP-dependent 6-phosphofructokinase, muscle type [KO:K00850] [EC:2.7.1.11]
102975836  PFKL; ATP-dependent 6-phosphofructokinase, liver type isoform X1 [KO:K00850] [EC:2.7.1.11]
102984681  PFKP; ATP-dependent 6-phosphofructokinase, platelet type [KO:K00850] [EC:2.7.1.11]
102996416  FBP2; fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
102996701  fructose-1,6-bisphosphatase 1 isoform X2 [KO:K03841] [EC:3.1.3.11]
102986347  ALDOA; fructose-bisphosphate aldolase A [KO:K01623] [EC:4.1.2.13]
102994694  ALDOB; fructose-bisphosphate aldolase B isoform X1 [KO:K01623] [EC:4.1.2.13]
102984155  ALDOC; fructose-bisphosphate aldolase C [KO:K01623] [EC:4.1.2.13]
102983731  TPI1; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
102995243  GAPDH; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
102977642  LOW QUALITY PROTEIN: glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00134] [EC:1.2.1.12]
102996826  GAPDHS; LOW QUALITY PROTEIN: glyceraldehyde-3-phosphate dehydrogenase, testis-specific [KO:K10705] [EC:1.2.1.12]
102988198  PGK1; phosphoglycerate kinase 1 isoform X1 [KO:K00927] [EC:2.7.2.3]
102975465  LOW QUALITY PROTEIN: phosphoglycerate kinase 1-like [KO:K00927] [EC:2.7.2.3]
102980431  phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
114484604  phosphoglycerate mutase 1-like [KO:K01834] [EC:5.4.2.11]
102981734  LOW QUALITY PROTEIN: phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
114484516  phosphoglycerate mutase 1-like [KO:K01834] [EC:5.4.2.11]
102992216  PGAM2; phosphoglycerate mutase 2 isoform X2 [KO:K01834] [EC:5.4.2.11]
102981575  ENO1; alpha-enolase isoform X1 [KO:K01689] [EC:4.2.1.11]
102980830  ENO3; beta-enolase isoform X1 [KO:K01689] [EC:4.2.1.11]
102984562  ENO2; gamma-enolase isoform X4 [KO:K01689] [EC:4.2.1.11]
102994978  ENO4; enolase 4 [KO:K27394] [EC:4.2.1.11]
102983574  PKM; pyruvate kinase PKM isoform X3 [KO:K00873] [EC:2.7.1.40]
102982777  PKLR; pyruvate kinase PKLR [KO:K12406] [EC:2.7.1.40]
102988053  PDHA1; pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform X1 [KO:K00161] [EC:1.2.4.1]
102986441  PDHA2; LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [KO:K00161] [EC:1.2.4.1]
102988097  PDHB; pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X4 [KO:K00162] [EC:1.2.4.1]
102996558  DLAT; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
102996392  DLD; dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
102988802  L-lactate dehydrogenase A-like 6B [KO:K00016] [EC:1.1.1.27]
102975715  LDHA; L-lactate dehydrogenase A chain [KO:K00016] [EC:1.1.1.27]
102974077  LDHB; L-lactate dehydrogenase B chain [KO:K00016] [EC:1.1.1.27]
102976495  L-lactate dehydrogenase C chain isoform X5 [KO:K00016] [EC:1.1.1.27]
102986777  ADH7; LOW QUALITY PROTEIN: all-trans-retinol dehydrogenase [NAD(+)] ADH7 [KO:K13951] [EC:1.1.1.1]
102987348  alcohol dehydrogenase E chain [KO:K13951] [EC:1.1.1.1]
102992927  LOW QUALITY PROTEIN: all-trans-retinol dehydrogenase [NAD(+)] ADH4-like [KO:K13980] [EC:1.1.1.1]
102977780  ADH5; alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
102977999  AKR1A1; aldo-keto reductase family 1 member A1 [KO:K00002] [EC:1.1.1.2]
102977687  aldo-keto reductase family 1 member A1-like [KO:K00002] [EC:1.1.1.2]
102976726  ALDH2; aldehyde dehydrogenase, mitochondrial isoform X1 [KO:K00128] [EC:1.2.1.3]
102989672  ALDH1B1; aldehyde dehydrogenase X, mitochondrial [KO:K00128] [EC:1.2.1.3]
102988318  ALDH3A2; aldehyde dehydrogenase family 3 member A2 [KO:K00128] [EC:1.2.1.3]
102990841  ALDH7A1; alpha-aminoadipic semialdehyde dehydrogenase [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
102978670  ALDH9A1; 4-trimethylaminobutyraldehyde dehydrogenase isoform X1 [KO:K00149] [EC:1.2.1.47 1.2.1.3]
102995351  ALDH3B1; LOW QUALITY PROTEIN: aldehyde dehydrogenase family 3 member B1 [KO:K00129] [EC:1.2.1.5]
102989528  ALDH3A1; aldehyde dehydrogenase, dimeric NADP-preferring [KO:K00129] [EC:1.2.1.5]
102974990  ACSS2; acetyl-coenzyme A synthetase, cytoplasmic isoform X1 [KO:K01895] [EC:6.2.1.1]
102980142  acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X1 [KO:K01895] [EC:6.2.1.1]
102977377  GALM; galactose mutarotase isoform X2 [KO:K01785] [EC:5.1.3.3]
102991571  PGM1; phosphoglucomutase-1 isoform X2 [KO:K01835] [EC:5.4.2.2]
102976351  PGM2; phosphopentomutase isoform X2 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
102996909  G6PC2; glucose-6-phosphatase 2 isoform X1 [KO:K01084] [EC:3.1.3.9]
102976416  G6PC3; glucose-6-phosphatase 3 isoform X1 [KO:K01084] [EC:3.1.3.9]
102990138  G6PC1; glucose-6-phosphatase catalytic subunit 1 [KO:K01084] [EC:3.1.3.9]
102996053  ADPGK; ADP-dependent glucokinase isoform X1 [KO:K08074] [EC:2.7.1.147]
102985972  BPGM; bisphosphoglycerate mutase [KO:K01837] [EC:5.4.2.4 5.4.2.11]
102981370  MINPP1; multiple inositol polyphosphate phosphatase 1 isoform X1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
102997033  PCK2; phosphoenolpyruvate carboxykinase [GTP], mitochondrial isoform X1 [KO:K01596] [EC:4.1.1.32]
102990592  PCK1; phosphoenolpyruvate carboxykinase, cytosolic [GTP] isoform X2 [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pcad00020  Citrate cycle (TCA cycle)
pcad00030  Pentose phosphate pathway
pcad00500  Starch and sucrose metabolism
pcad00620  Pyruvate metabolism
pcad00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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