KEGG   PATHWAY: phas04146
Entry
phas04146                   Pathway                                
Name
Peroxisome - Phyllostomus hastatus (greater spear-nosed bat)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
phas04146  Peroxisome
phas04146

Other DBs
GO: 0005777
Organism
Phyllostomus hastatus (greater spear-nosed bat) [GN:phas]
Gene
123810052  PEX16; peroxisomal biogenesis factor 16 isoform X1 [KO:K13335]
123821345  PEX3; peroxisomal biogenesis factor 3 [KO:K13336]
123820626  PEX19; peroxisomal biogenesis factor 19 [KO:K13337]
123824007  ABCD3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
123811485  PEX1; peroxisome biogenesis factor 1 isoform X1 [KO:K13338]
123821501  PEX6; peroxisome biogenesis factor 6 isoform X1 [KO:K13339]
123818797  PEX26; peroxisome assembly protein 26 isoform X1 [KO:K13340]
123821647  PEX7; peroxisomal biogenesis factor 7 [KO:K13341]
123827237  PEX5L; PEX5-related protein isoform X1 [KO:K13342]
123810601  PEX5; peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
123832351  PEX14; peroxisomal membrane protein PEX14 [KO:K13343]
123811621  PEX13; peroxisome biogenesis factor 13 [KO:K13344]
123817134  PEX12; peroxisome assembly protein 12 [KO:K13345]
123831629  PEX10; peroxisome biogenesis factor 10 [KO:K13346]
123825759  PEX2; peroxisome biogenesis factor 2 isoform X1 [KO:K06664]
123820903  PXMP2; peroxisomal membrane protein 2 isoform X1 [KO:K13347]
123828413  MPV17L2; mpv17-like protein 2 isoform X1 [KO:K13348]
123822600  MPV17; protein Mpv17 [KO:K13348]
123806424  MPV17L; mpv17-like protein [KO:K13349]
123815061  PXMP4; peroxisomal membrane protein 4 [KO:K13350]
123809636  PEX11A; peroxisomal membrane protein 11A isoform X1 [KO:K13351]
123804439  PEX11B; peroxisomal membrane protein 11B [KO:K13352]
123813162  PEX11G; peroxisomal membrane protein 11C [KO:K13353]
123816220  SLC25A17; peroxisomal membrane protein PMP34 isoform X1 [KO:K13354]
123830654  HACL1; 2-hydroxyacyl-CoA lyase 1 isoform X1 [KO:K12261] [EC:4.1.2.63]
123824762  AMACR; alpha-methylacyl-CoA racemase [KO:K01796] [EC:5.1.99.4]
123831285  PHYH; phytanoyl-CoA dioxygenase, peroxisomal [KO:K00477] [EC:1.14.11.18]
123815647  ACOX3; peroxisomal acyl-coenzyme A oxidase 3 isoform X1 [KO:K00232] [EC:1.3.3.6]
123816631  ACOX1; peroxisomal acyl-coenzyme A oxidase 1 isoform X1 [KO:K00232] [EC:1.3.3.6]
123814456  ACOX2; peroxisomal acyl-coenzyme A oxidase 2 [KO:K10214] [EC:1.17.99.3]
123818113  HSD17B4; peroxisomal multifunctional enzyme type 2 isoform X1 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
123830395  SCP2; sterol carrier protein 2 isoform X1 [KO:K08764] [EC:2.3.1.176]
123819950  BAAT; bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
123827199  EHHADH; peroxisomal bifunctional enzyme [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
123830490  ACAA1; 3-ketoacyl-CoA thiolase, peroxisomal [KO:K07513] [EC:2.3.1.16]
123825700  DECR2; peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] [KO:K13237] [EC:1.3.1.124]
123823767  ECH1; delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
123823129  ABCD1; ATP-binding cassette sub-family D member 1 [KO:K05675] [EC:7.6.2.4]
123813024  ABCD2; ATP-binding cassette sub-family D member 2 isoform X1 [KO:K05676] [EC:7.6.2.4]
123808776  ABCD4; lysosomal cobalamin transporter ABCD4 [KO:K05678] [EC:7.6.2.8]
123808494  SLC27A2; very long-chain acyl-CoA synthetase [KO:K08746] [EC:6.2.1.- 6.2.1.3]
123805106  ACSL4; long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
123828759  ACSL5; long-chain-fatty-acid--CoA ligase 5 isoform X1 [KO:K01897] [EC:6.2.1.3]
123828819  ACSL3; fatty acid CoA ligase Acsl3 [KO:K01897] [EC:6.2.1.3]
123807798  ACSL1; long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
123808611  ACSL6; long-chain-fatty-acid--CoA ligase 6 isoform X1 [KO:K01897] [EC:6.2.1.3]
123828324  PECR; peroxisomal trans-2-enoyl-CoA reductase isoform X1 [KO:K07753] [EC:1.3.1.38]
123820760  ECI2; enoyl-CoA delta isomerase 2 isoform X1 [KO:K13239] [EC:5.3.3.8]
123805901  NUDT7; peroxisomal coenzyme A diphosphatase NUDT7 isoform X1 [KO:K17879] [EC:3.6.1.77]
123818110  NUDT12; NAD-capped RNA hydrolase NUDT12 isoform X1 [KO:K03426] [EC:3.6.1.22]
123820856  NUDT13; NAD(P)H pyrophosphatase NUDT13, mitochondrial isoform X1 [KO:K03426] [EC:3.6.1.22]
123805891  NUDT19; acyl-coenzyme A diphosphatase NUDT19 [KO:K13355] [EC:3.6.1.77]
123815348  ACOT8; acyl-coenzyme A thioesterase 8 isoform X1 [KO:K11992] [EC:3.1.2.27]
123823494  CRAT; carnitine O-acetyltransferase isoform X1 [KO:K00624] [EC:2.3.1.7]
123811965  CROT; peroxisomal carnitine O-octanoyltransferase [KO:K05940] [EC:2.3.1.137]
123805872  MLYCD; malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
123833249  GNPAT; dihydroxyacetone phosphate acyltransferase [KO:K00649] [EC:2.3.1.42]
123818127  AGPS; alkyldihydroxyacetonephosphate synthase, peroxisomal [KO:K00803] [EC:2.5.1.26]
123812451  FAR2; fatty acyl-CoA reductase 2 [KO:K13356] [EC:1.2.1.84]
123809997  FAR1; fatty acyl-CoA reductase 1 isoform X1 [KO:K13356] [EC:1.2.1.84]
123822994  MVK; mevalonate kinase [KO:K00869] [EC:2.7.1.36]
123833449  PMVK; phosphomevalonate kinase isoform X1 [KO:K13273] [EC:2.7.4.2]
123823204  AGXT; serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
123821558  DAO; D-amino-acid oxidase isoform X1 [KO:K00273] [EC:1.4.3.3]
123821693  DDO; D-aspartate oxidase [KO:K00272] [EC:1.4.3.1]
123828734  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
123809626  IDH2; isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
123828962  PAOX; peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 [KO:K00308] [EC:1.5.3.13]
123817326  PIPOX; peroxisomal sarcosine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
123821689  HMGCLL1; 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1 [KO:K01640] [EC:4.1.3.4]
123831771  HMGCL; hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [KO:K01640] [EC:4.1.3.4]
123804762  HAO2; hydroxyacid oxidase 2 [KO:K11517] [EC:1.1.3.15]
123815115  HAO1; hydroxyacid oxidase 1 isoform X1 [KO:K11517] [EC:1.1.3.15]
123809957  CAT; catalase [KO:K03781] [EC:1.11.1.6]
123829319  PRDX5; peroxiredoxin-5, mitochondrial [KO:K11187] [EC:1.11.1.24]
123828075  SOD1; superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
123821738  SOD2; superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
123817124  NOS2; nitric oxide synthase, inducible [KO:K13241] [EC:1.14.13.39]
123821837  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
123831851  PRDX1; peroxiredoxin-1 [KO:K13279] [EC:1.11.1.24]
123813726  EPHX2; bifunctional epoxide hydrolase 2 isoform X1 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
123831005  GSTK1; glutathione S-transferase kappa 1 [KO:K13299] [EC:2.5.1.18]
123813617  LOW QUALITY PROTEIN: xanthine dehydrogenase/oxidase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
123822476  XDH; LOW QUALITY PROTEIN: xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
123820391  dehydrogenase/reductase SDR family member 4-like isoform X1 [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
phas00071  Fatty acid degradation
phas00120  Primary bile acid biosynthesis
phas00230  Purine metabolism
phas00564  Glycerophospholipid metabolism
phas00565  Ether lipid metabolism
phas00830  Retinol metabolism
phas00900  Terpenoid backbone biosynthesis
phas03320  PPAR signaling pathway
KO pathway
ko04146   
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