KEGG   PATHWAY: pxb00230
Entry
pxb00230                    Pathway                                
Name
Purine metabolism - Pyrus x bretschneideri (Chinese white pear)
Class
Metabolism; Nucleotide metabolism
Pathway map
pxb00230  Purine metabolism
pxb00230

Module
pxb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pxb00230]
pxb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pxb00230]
pxb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pxb00230]
Other DBs
GO: 0006163 0042278
Organism
Pyrus x bretschneideri (Chinese white pear) [GN:pxb]
Gene
103952940  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
103963726  nudix hydrolase 2 isoform X1 [KO:K26956] [EC:3.6.1.13 3.6.1.22]
103959552  nudix hydrolase 2-like [KO:K26956] [EC:3.6.1.13 3.6.1.22]
103942477  nudix hydrolase 2-like [KO:K26956] [EC:3.6.1.13 3.6.1.22]
103946252  nudix hydrolase 10-like [KO:K26956] [EC:3.6.1.13 3.6.1.22]
103963929  nudix hydrolase 10-like [KO:K26956] [EC:3.6.1.13 3.6.1.22]
103942478  nudix hydrolase 2-like [KO:K26956] [EC:3.6.1.13 3.6.1.22]
103958904  nudix hydrolase 23, chloroplastic isoform X1 [KO:K18453] [EC:3.6.1.13 3.6.1.18]
103962357  nudix hydrolase 14, chloroplastic [KO:K18447] [EC:3.6.1.21]
103943049  phosphoglucomutase, cytoplasmic [KO:K01835] [EC:5.4.2.2]
103960494  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
103962480  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
103929367  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
103965511  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
103940816  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
103938779  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
103940821  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
103966949  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
103967979  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
103945003  phosphoribosylamine--glycine ligase-like [KO:K01945] [EC:6.3.4.13]
103946370  phosphoribosylamine--glycine ligase-like isoform X1 [KO:K01945] [EC:6.3.4.13]
103940587  phosphoribosylglycinamide formyltransferase, chloroplastic-like [KO:K00601] [EC:2.1.2.2]
103948251  phosphoribosylglycinamide formyltransferase, chloroplastic-like [KO:K00601] [EC:2.1.2.2]
103959287  phosphoribosylglycinamide formyltransferase, chloroplastic-like isoform X1 [KO:K00601] [EC:2.1.2.2]
103960350  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
103960346  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
103960355  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
103962592  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
103934539  phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial-like [KO:K01933] [EC:6.3.3.1]
103948002  phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial-like [KO:K01933] [EC:6.3.3.1]
103962788  phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial-like [KO:K01933] [EC:6.3.3.1]
103954378  phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform X1 [KO:K11808] [EC:4.1.1.21]
103961338  phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform X1 [KO:K11808] [EC:4.1.1.21]
103962539  phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic [KO:K01923] [EC:6.3.2.6]
103961694  uncharacterized protein LOC103961694 isoform X1 [KO:K00602] [EC:2.1.2.3 3.5.4.10]
103941690  uncharacterized protein LOC103941690 [KO:K00602] [EC:2.1.2.3 3.5.4.10]
103939172  adenine phosphoribosyltransferase 3-like [KO:K00759] [EC:2.4.2.7]
103945277  adenine phosphoribosyltransferase 1, chloroplastic-like [KO:K00759] [EC:2.4.2.7]
103945278  LOW QUALITY PROTEIN: adenine phosphoribosyltransferase 1-like [KO:K00759] [EC:2.4.2.7]
103950991  adenine phosphoribosyltransferase 1-like [KO:K00759] [EC:2.4.2.7]
103937929  adenine phosphoribosyltransferase 5-like isoform X1 [KO:K00759] [EC:2.4.2.7]
103932983  adenine phosphoribosyltransferase 3 [KO:K00759] [EC:2.4.2.7]
103964783  adenine phosphoribosyltransferase 3-like [KO:K00759] [EC:2.4.2.7]
103935984  uncharacterized protein LOC103935984 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
103956631  uncharacterized protein LOC103956631 isoform X1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
103956639  uncharacterized protein LOC103956639 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
103927912  uncharacterized protein LOC103927912 [KO:K00760] [EC:2.4.2.8]
103934674  uncharacterized protein LOC103934674 [KO:K00760] [EC:2.4.2.8]
103953320  inosine-5'-monophosphate dehydrogenase 2-like [KO:K00088] [EC:1.1.1.205]
103940878  inosine-5'-monophosphate dehydrogenase 2-like [KO:K00088] [EC:1.1.1.205]
103940962  inosine-5'-monophosphate dehydrogenase 2-like [KO:K00088] [EC:1.1.1.205]
103950053  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
103933915  nucleoside diphosphate kinase III, chloroplastic/mitochondrial-like [KO:K00940] [EC:2.7.4.6]
103949232  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
103929117  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
103962247  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
103950822  probable apyrase 6 isoform X1 [KO:K01510] [EC:3.6.1.5]
103956192  apyrase 2-like [KO:K14641] [EC:3.6.1.5]
103952215  inosine triphosphate pyrophosphatase-like [KO:K01519] [EC:3.6.1.66]
103966049  inosine triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
103965536  xanthine dehydrogenase 1-like isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
103931866  nudix hydrolase 25 [KO:K26955] [EC:3.6.1.17]
103941192  uncharacterized protein LOC103941192 [KO:K01951] [EC:6.3.5.2]
103938468  uncharacterized protein LOC103938468 [KO:K01951] [EC:6.3.5.2]
103954826  uncharacterized protein LOC103954826 [KO:K01951] [EC:6.3.5.2]
103954832  uncharacterized protein LOC103954832 [KO:K01951] [EC:6.3.5.2]
103927738  guanylate kinase 2-like isoform X2 [KO:K00942] [EC:2.7.4.8]
103943550  guanylate kinase 2, chloroplastic/mitochondrial-like [KO:K00942] [EC:2.7.4.8]
103932102  guanylate kinase 2, chloroplastic/mitochondrial-like [KO:K00942] [EC:2.7.4.8]
103968036  guanylate kinase 2-like isoform X2 [KO:K00942] [EC:2.7.4.8]
103963074  guanylate kinase 2-like isoform X1 [KO:K00942] [EC:2.7.4.8]
103963090  guanylate kinase 2-like isoform X1 [KO:K00942] [EC:2.7.4.8]
103955608  guanylate kinase 2, chloroplastic/mitochondrial-like [KO:K00942] [EC:2.7.4.8]
103961828  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
103943543  ribonucleoside-diphosphate reductase small chain A-like [KO:K10808] [EC:1.17.4.1]
103936774  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
103941832  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
103941838  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
103955618  ribonucleoside-diphosphate reductase small chain A-like [KO:K10808] [EC:1.17.4.1]
103960882  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
103946814  HD domain-containing protein C4G3.17 [KO:K07023] [EC:3.1.3.89]
103947379  HD domain-containing protein 2-like [KO:K07023] [EC:3.1.3.89]
103964530  HD domain-containing protein 2-like [KO:K07023] [EC:3.1.3.89]
103964532  HD domain-containing protein C4G3.17-like [KO:K07023] [EC:3.1.3.89]
103945101  protein prune homolog [KO:K01514] [EC:3.6.1.11]
103939249  probable GTP diphosphokinase RSH2, chloroplastic isoform X1 [KO:K00951] [EC:2.7.6.5]
103944695  probable GTP diphosphokinase CRSH, chloroplastic [KO:K00951] [EC:2.7.6.5]
103964277  probable GTP diphosphokinase RSH2, chloroplastic [KO:K00951] [EC:2.7.6.5]
103967197  putative GTP diphosphokinase RSH1, chloroplastic [KO:K00951] [EC:2.7.6.5]
103943170  phytosulfokine receptor 1 [KO:K27625] [EC:2.7.11.1 4.6.1.2]
103967058  adenylosuccinate synthetase 2, chloroplastic [KO:K01939] [EC:6.3.4.4]
103940197  AMP deaminase-like [KO:K01490] [EC:3.5.4.6]
103950884  AMP deaminase-like [KO:K01490] [EC:3.5.4.6]
103930528  AMP deaminase-like [KO:K01490] [EC:3.5.4.6]
103958374  adenosine kinase 2 [KO:K00856] [EC:2.7.1.20]
103926535  adenylate kinase 1, chloroplastic-like [KO:K00939] [EC:2.7.4.3]
103930878  adenylate kinase 1, chloroplastic-like [KO:K00939] [EC:2.7.4.3]
103933870  adenylate kinase 5, chloroplastic-like [KO:K00939] [EC:2.7.4.3]
103933874  adenylate kinase 5, chloroplastic-like [KO:K00939] [EC:2.7.4.3]
103950032  adenylate kinase 4-like [KO:K00939] [EC:2.7.4.3]
103952539  adenylate kinase, chloroplastic isoform X1 [KO:K00939] [EC:2.7.4.3]
103934093  adenylate kinase 1, chloroplastic-like isoform X1 [KO:K00939] [EC:2.7.4.3]
103938230  adenylate kinase 4 [KO:K00939] [EC:2.7.4.3]
103938235  probable adenylate kinase 7, mitochondrial [KO:K00939] [EC:2.7.4.3]
103948325  probable adenylate kinase 6, chloroplastic [KO:K00939] [EC:2.7.4.3]
103929144  adenylate kinase 4 [KO:K00939] [EC:2.7.4.3]
103955940  adenylate kinase 5, chloroplastic-like [KO:K00939] [EC:2.7.4.3]
103960906  probable adenylate kinase 7, mitochondrial isoform X2 [KO:K00939] [EC:2.7.4.3]
103966669  adenylate kinase-like [KO:K00939] [EC:2.7.4.3]
103964600  adenylate kinase isoenzyme 6 homolog [KO:K18532] [EC:2.7.4.3]
103963119  adenylate kinase isoenzyme 6 homolog [KO:K18532] [EC:2.7.4.3]
103950159  cancer-related nucleoside-triphosphatase homolog isoform X1 [KO:K06928] [EC:3.6.1.15]
103951848  ectonucleotide pyrophosphatase/phosphodiesterase family member 3-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
103943986  ectonucleotide pyrophosphatase/phosphodiesterase family member 3-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
103949177  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
103963332  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
103967590  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
103941106  ATP sulfurylase 1, chloroplastic-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
103927949  ATP sulfurylase 2 [KO:K13811] [EC:2.7.7.4 2.7.1.25]
103940360  ATP sulfurylase 1, chloroplastic [KO:K13811] [EC:2.7.7.4 2.7.1.25]
103961129  ATP sulfurylase 1, chloroplastic-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
103964771  ATP sulfurylase 1, chloroplastic-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
103944407  adenylyl-sulfate kinase 3-like isoform X1 [KO:K00860] [EC:2.7.1.25]
103945752  adenylyl-sulfate kinase 1, chloroplastic-like isoform X1 [KO:K00860] [EC:2.7.1.25]
103952645  adenylyl-sulfate kinase 3-like isoform X1 [KO:K00860] [EC:2.7.1.25]
103964457  adenylyl-sulfate kinase 3 [KO:K00860] [EC:2.7.1.25]
103956216  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
103930722  uncharacterized protein LOC103930722 isoform X1 [KO:K00860] [EC:2.7.1.25]
103933611  uricase-2 [KO:K00365] [EC:1.7.3.3]
103930665  allantoinase isoform X1 [KO:K01466] [EC:3.5.2.5]
103944278  allantoinase-like [KO:K01466] [EC:3.5.2.5]
103945185  allantoate deiminase-like [KO:K02083] [EC:3.5.3.9]
103932417  allantoate deiminase-like [KO:K02083] [EC:3.5.3.9]
103937908  LOW QUALITY PROTEIN: probable (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
103939434  LOW QUALITY PROTEIN: ureidoglycolate hydrolase-like [KO:K18151] [EC:3.5.1.116]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pxb00030  Pentose phosphate pathway
pxb00220  Arginine biosynthesis
pxb00250  Alanine, aspartate and glutamate metabolism
pxb00260  Glycine, serine and threonine metabolism
pxb00340  Histidine metabolism
pxb00630  Glyoxylate and dicarboxylate metabolism
pxb00730  Thiamine metabolism
pxb00740  Riboflavin metabolism
pxb00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

DBGET integrated database retrieval system