PATHWAY: rec00470
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Entry
rec00470 Pathway
Name
D-Amino acid metabolism - Rhizobium etli CIAT 652
Class
Metabolism; Metabolism of other amino acids
BRITE hierarchy
Pathway map
rec00470
D-Amino acid metabolism
Ortholog table
Other DBs
GO:
0046416
Organism
Rhizobium etli CIAT 652 [GN:
rec
]
Gene
RHECIAT_PC0000660
dadX; alanine racemase protein [KO:
K01775
] [EC:
5.1.1.1
]
RHECIAT_CH0001503
alr; alanine racemase protein [KO:
K01775
] [EC:
5.1.1.1
]
RHECIAT_CH0002065
probable D-alanine aminotransferase protein [KO:
K00824
] [EC:
2.6.1.21
]
RHECIAT_CH0002994
ddlB; D-alanine-D-alanine ligase protein [KO:
K01921
] [EC:
6.3.2.4
]
RHECIAT_CH0002567
ddlA; D-alanine-D-alanine ligase protein [KO:
K01921
] [EC:
6.3.2.4
]
RHECIAT_PB0000063
putative D-alanine-D-alanine ligase protein [KO:
K01921
] [EC:
6.3.2.4
]
RHECIAT_CH0002407
glsA; glutaminase protein [KO:
K01425
] [EC:
3.5.1.2
]
RHECIAT_CH0002391
purQ; phosphoribosylformylglycinamidine synthase protein, glutamine amidotransferase domain [KO:
K23265
] [EC:
6.3.5.3
3.5.1.2
]
RHECIAT_CH0002410
murI; glutamate racemase protein (required for biosynthesis of D-glutamate and peptidoglycan) [KO:
K01776
] [EC:
5.1.1.3
]
RHECIAT_CH0003000
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase protein [KO:
K01925
] [EC:
6.3.2.9
]
RHECIAT_CH0002447
putative racemase/isomerase protein [KO:
K19802
] [EC:
5.1.1.20
5.1.1.25
]
RHECIAT_CH0002904
probable aspartate racemase protein [KO:
K01779
] [EC:
5.1.1.13
]
RHECIAT_CH0002054
putative D-serine ammonia-lyase protein [KO:
K01753
] [EC:
4.3.1.18
]
RHECIAT_PC0000814
hypothetical conserved protein [KO:
K01753
] [EC:
4.3.1.18
]
RHECIAT_PC0000806
probable 1-aminocyclopropane-1-carboxylate deaminase protein [KO:
K05396
] [EC:
4.4.1.15
]
RHECIAT_PB0000065
putative diaminopimelate epimerase protein [KO:
K01778
] [EC:
5.1.1.7
]
RHECIAT_CH0004237
dapF; diaminopimelate epimerase protein [KO:
K01778
] [EC:
5.1.1.7
]
RHECIAT_CH0004068
lysA; diaminopimelate decarboxylase protein [KO:
K01586
] [EC:
4.1.1.20
]
RHECIAT_PC0000647
putative proline racemase protein [KO:
K01777
] [EC:
5.1.1.4
]
RHECIAT_PC0000639
probable proline racemase protein [KO:
K01777
] [EC:
5.1.1.4
]
RHECIAT_PC0000572
putative proline racemase protein [KO:
K12658
] [EC:
5.1.1.8
]
RHECIAT_PC0000821
putative semialdehyde dehydrogenase protein [KO:
K13877
] [EC:
1.2.1.26
]
RHECIAT_PC0000659
dadA; D-amino-acid dehydrogenase protein, small subunit [KO:
K00285
] [EC:
1.4.5.1
]
Compound
C00022
Pyruvate
C00025
L-Glutamate
C00026
2-Oxoglutarate
C00036
Oxaloacetate
C00037
Glycine
C00041
L-Alanine
C00047
L-Lysine
C00049
L-Aspartate
C00062
L-Arginine
C00064
L-Glutamine
C00065
L-Serine
C00073
L-Methionine
C00077
L-Ornithine
C00079
L-Phenylalanine
C00084
Acetaldehyde
C00097
L-Cysteine
C00133
D-Alanine
C00134
Putrescine
C00135
L-Histidine
C00148
L-Proline
C00166
Phenylpyruvate
C00188
L-Threonine
C00217
D-Glutamate
C00402
D-Aspartate
C00431
5-Aminopentanoate
C00433
2,5-Dioxopentanoate
C00515
D-Ornithine
C00624
N-Acetyl-L-glutamate
C00666
LL-2,6-Diaminoheptanedioate
C00680
meso-2,6-Diaminoheptanedioate
C00692
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
C00739
D-Lysine
C00740
D-Serine
C00763
D-Proline
C00792
D-Arginine
C00793
D-Cysteine
C00819
D-Glutamine
C00820
D-Threonine
C00855
D-Methionine
C00993
D-Alanyl-D-alanine
C01110
5-Amino-2-oxopentanoic acid
C01157
Hydroxyproline
C01180
4-Methylthio-2-oxobutanoic acid
C01667
Bacitracin
C01672
Cadaverine
C01726
D-Lombricine
C02237
5-Oxo-D-proline
C02265
D-Phenylalanine
C02855
N-Phospho-D-lombricine
C03239
6-Amino-2-oxohexanoate
C03341
2-Amino-4-oxopentanoic acid
C03440
cis-4-Hydroxy-D-proline
C03564
1-Pyrroline-2-carboxylate
C03771
5-Guanidino-2-oxopentanoate
C03933
5-D-Glutamyl-D-glutamyl-peptide
C03943
(2R,4S)-2,4-Diaminopentanoate
C04260
O-D-Alanyl-poly(ribitol phosphate)
C04282
1-Pyrroline-4-hydroxy-2-carboxylate
C04457
D-Alanyl-alanyl-poly(glycerolphosphate)
C05161
(2R,5S)-2,5-Diaminohexanoate
C05620
N-Acetyl-D-phenylalanine
C05825
2-Amino-5-oxohexanoate
C05939
Linatine
C05941
2-Oxo-4-hydroxy-5-aminovalerate
C05942
Pyrrole-2-carboxylate
C06419
D-Histidine
C22024
Staphylopine
C22025
(2S)-2-Amino-4-{[(1R)-1-carboxy-2-(1H-imidazol-4-yl)ethyl]amino}butanoate
C22611
N-Acetyl-D-glutamate
Reference
PMID:
33788945
Authors
Miyamoto T, Homma H
Title
D-Amino acid metabolism in bacteria.
Journal
J Biochem 170:5-13 (2021)
DOI:
10.1093/jb/mvab043
Reference
PMID:
27230378
Authors
Ghssein G, Brutesco C, Ouerdane L, Fojcik C, Izaute A, Wang S, Hajjar C, Lobinski R, Lemaire D, Richaud P, Voulhoux R, Espaillat A, Cava F, Pignol D, Borezee-Durant E, Arnoux P
Title
Biosynthesis of a broad-spectrum nicotianamine-like metallophore in Staphylococcus aureus.
Journal
Science 352:1105-9 (2016)
DOI:
10.1126/science.aaf1018
Related
pathway
rec00010
Glycolysis / Gluconeogenesis
rec00020
Citrate cycle (TCA cycle)
rec00250
Alanine, aspartate and glutamate metabolism
rec00260
Glycine, serine and threonine metabolism
rec00270
Cysteine and methionine metabolism
rec00300
Lysine biosynthesis
rec00310
Lysine degradation
rec00330
Arginine and proline metabolism
rec00340
Histidine metabolism
rec00360
Phenylalanine metabolism
rec00550
Peptidoglycan biosynthesis
rec00620
Pyruvate metabolism
KO pathway
ko00470
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