KEGG   PATHWAY: zju00270
Entry
zju00270                    Pathway                                
Name
Cysteine and methionine metabolism - Ziziphus jujuba (Chinese jujube)
Description
Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].
Class
Metabolism; Amino acid metabolism
Pathway map
zju00270  Cysteine and methionine metabolism
zju00270

Module
zju_M00021  Cysteine biosynthesis, serine => cysteine [PATH:zju00270]
zju_M00034  Methionine salvage pathway [PATH:zju00270]
zju_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:zju00270]
Other DBs
GO: 0006534 0006555
Organism
Ziziphus jujuba (Chinese jujube) [GN:zju]
Gene
107403316  serine acetyltransferase 1, chloroplastic [KO:K00640] [EC:2.3.1.30]
107403319  serine acetyltransferase 1, chloroplastic [KO:K00640] [EC:2.3.1.30]
107415427  serine acetyltransferase 1, chloroplastic-like [KO:K00640] [EC:2.3.1.30]
107424304  serine acetyltransferase 2 [KO:K00640] [EC:2.3.1.30]
107424031  serine acetyltransferase 5 [KO:K00640] [EC:2.3.1.30]
107407249  cysteine synthase isoform X1 [KO:K01738] [EC:2.5.1.47]
107407262  cysteine synthase [KO:K01738] [EC:2.5.1.47]
107407993  cysteine synthase 2 isoform X1 [KO:K01738] [EC:2.5.1.47]
107412265  cysteine synthase isoform X1 [KO:K01738] [EC:2.5.1.47]
107412269  cysteine synthase [KO:K01738] [EC:2.5.1.47]
107423175  cysteine synthase [KO:K01738] [EC:2.5.1.47]
107412275  cysteine synthase-like isoform X1 [KO:K01738] [EC:2.5.1.47]
107404050  bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial [KO:K13034] [EC:2.5.1.47 4.4.1.9]
107433787  cystathionine beta-lyase, chloroplastic isoform X1 [KO:K01760] [EC:4.4.1.13]
107423145  homocysteine S-methyltransferase 3 [KO:K00547] [EC:2.1.1.10]
107426397  homocysteine S-methyltransferase 2 isoform X1 [KO:K00547] [EC:2.1.1.10]
107429447  homocysteine S-methyltransferase 1 [KO:K00547] [EC:2.1.1.10]
107410384  5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [KO:K00549] [EC:2.1.1.14]
107433064  5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [KO:K00549] [EC:2.1.1.14]
107409969  S-adenosylmethionine synthase 2 [KO:K00789] [EC:2.5.1.6]
107411463  S-adenosylmethionine synthase 3 [KO:K00789] [EC:2.5.1.6]
107411715  S-adenosylmethionine synthase 2 [KO:K00789] [EC:2.5.1.6]
107431950  S-adenosylmethionine synthase 4 [KO:K00789] [EC:2.5.1.6]
107416501  S-adenosylmethionine decarboxylase proenzyme [KO:K01611] [EC:4.1.1.50]
107423231  S-adenosylmethionine decarboxylase proenzyme 4 [KO:K01611] [EC:4.1.1.50]
107428270  S-adenosylmethionine decarboxylase proenzyme [KO:K01611] [EC:4.1.1.50]
125418593  spermidine synthase 2 [KO:K00797] [EC:2.5.1.16]
107414606  spermine synthase [KO:K00797] [EC:2.5.1.16]
107418990  nicotianamine synthase [KO:K05953] [EC:2.5.1.43]
125421187  nicotianamine synthase [KO:K05953] [EC:2.5.1.43]
125424362  5'-methylthioadenosine nucleosidase [KO:K01244] [EC:3.2.2.16]
107427008  methylthioribose kinase [KO:K00899] [EC:2.7.1.100]
107427009  methylthioribose kinase [KO:K00899] [EC:2.7.1.100]
107423916  methylthioribose-1-phosphate isomerase [KO:K08963] [EC:5.3.1.23]
107422451  probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 isoform X1 [KO:K16054] [EC:4.2.1.109 3.1.3.77]
107417426  probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 2 isoform X1 [KO:K16054] [EC:4.2.1.109 3.1.3.77]
107423143  acireductone dioxygenase 1 [KO:K08967] [EC:1.13.11.53 1.13.11.54]
107423094  acireductone dioxygenase 2 [KO:K08967] [EC:1.13.11.53 1.13.11.54]
107403249  uncharacterized protein LOC107403249 [KO:K23977] [EC:2.6.1.117]
107417315  LOW QUALITY PROTEIN: probable aminotransferase TAT2 [KO:K00815] [EC:2.6.1.5]
107417411  tyrosine aminotransferase-like isoform X1 [KO:K00815] [EC:2.6.1.5]
107432580  probable aminotransferase TAT2 isoform X1 [KO:K00815] [EC:2.6.1.5]
107417412  tyrosine aminotransferase-like [KO:K00815] [EC:2.6.1.5]
107406801  aromatic aminotransferase ISS1 [KO:K00837] [EC:2.6.1.-]
107430088  methionine gamma-lyase [KO:K01761] [EC:4.4.1.11]
107434359  DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [KO:K00558] [EC:2.1.1.37]
107415803  DNA (cytosine-5)-methyltransferase 1-like [KO:K00558] [EC:2.1.1.37]
107422360  adenosylhomocysteinase [KO:K01251] [EC:3.13.2.1]
107418260  adenosylhomocysteinase 1 [KO:K01251] [EC:3.13.2.1]
107432945  1-aminocyclopropane-1-carboxylate synthase 1 [KO:K20772] [EC:4.4.1.14]
107430205  1-aminocyclopropane-1-carboxylate synthase [KO:K20772] [EC:4.4.1.14]
107423985  1-aminocyclopropane-1-carboxylate synthase 7 [KO:K01762] [EC:4.4.1.14]
107420607  1-aminocyclopropane-1-carboxylate synthase 3 [KO:K01762] [EC:4.4.1.14]
107425000  1-aminocyclopropane-1-carboxylate synthase [KO:K01762] [EC:4.4.1.14]
107414763  1-aminocyclopropane-1-carboxylate oxidase [KO:K05933] [EC:1.14.17.4]
107417150  1-aminocyclopropane-1-carboxylate oxidase [KO:K05933] [EC:1.14.17.4]
107423970  1-aminocyclopropane-1-carboxylate oxidase 1 [KO:K05933] [EC:1.14.17.4]
107421119  1-aminocyclopropane-1-carboxylate oxidase 5 [KO:K05933] [EC:1.14.17.4]
107429704  aspartokinase 1, chloroplastic [KO:K00928] [EC:2.7.2.4]
107429585  aspartokinase 2, chloroplastic-like [KO:K00928] [EC:2.7.2.4]
107427957  aspartokinase 2, chloroplastic isoform X1 [KO:K00928] [EC:2.7.2.4]
107423468  bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic [KO:K12524] [EC:2.7.2.4 1.1.1.3]
125418739  uncharacterized protein LOC125418739 [KO:K00133] [EC:1.2.1.11]
107406356  cystathionine gamma-synthase 1, chloroplastic [KO:K01739] [EC:2.5.1.48]
107420625  branched-chain-amino-acid aminotransferase 2, chloroplastic [KO:K00826] [EC:2.6.1.42]
107420627  branched-chain amino acid aminotransferase 1, mitochondrial [KO:K00826] [EC:2.6.1.42]
107425030  branched-chain amino acid aminotransferase 2, chloroplastic-like isoform X1 [KO:K00826] [EC:2.6.1.42]
107427095  branched-chain amino acid aminotransferase 2, chloroplastic [KO:K00826] [EC:2.6.1.42]
107427107  branched-chain-amino-acid aminotransferase 2, chloroplastic [KO:K00826] [EC:2.6.1.42]
107420601  branched-chain amino acid aminotransferase 1, mitochondrial [KO:K00826] [EC:2.6.1.42]
125423957  alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
107431291  alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
112488868  glutamate--cysteine ligase, chloroplastic-like [KO:K01919] [EC:6.3.2.2]
107429881  glutamate--cysteine ligase, chloroplastic-like [KO:K01919] [EC:6.3.2.2]
107429880  glutamate--cysteine ligase, chloroplastic [KO:K01919] [EC:6.3.2.2]
107429899  glutamate--cysteine ligase, chloroplastic [KO:K01919] [EC:6.3.2.2]
107429901  LOW QUALITY PROTEIN: glutamate--cysteine ligase, chloroplastic [KO:K01919] [EC:6.3.2.2]
107411964  glutathione synthetase, chloroplastic [KO:K21456] [EC:6.3.2.3]
107420693  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
107420694  aspartate aminotransferase, cytoplasmic-like [KO:K14454] [EC:2.6.1.1]
125421882  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
107431017  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
107420360  aspartate aminotransferase P2, mitochondrial isoform X1 [KO:K00811] [EC:2.6.1.1]
107417867  thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial [KO:K01011] [EC:2.8.1.1 2.8.1.2]
107418882  L-lactate dehydrogenase B [KO:K00016] [EC:1.1.1.27]
107419587  bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial [KO:K05396] [EC:4.4.1.15]
107428480  D-cysteine desulfhydrase 2, mitochondrial [KO:K05396] [EC:4.4.1.15]
107411685  probable L-cysteine desulfhydrase, chloroplastic [KO:K22207] [EC:4.4.1.28]
107426174  L-cysteine desulfhydrase [KO:K22207] [EC:4.4.1.28]
107411704  probable L-cysteine desulfhydrase, chloroplastic [KO:K22207] [EC:4.4.1.28]
132799075  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
107424209  malate dehydrogenase isoform X1 [KO:K00025] [EC:1.1.1.37]
107424214  LOW QUALITY PROTEIN: malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
107424221  malate dehydrogenase, cytoplasmic isoform X1 [KO:K00025] [EC:1.1.1.37]
107422883  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
112492492  LOW QUALITY PROTEIN: malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
107427480  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
107432538  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
107419247  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
107424991  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
107432999  S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent), chloroplastic isoform X4 [KO:K22846] [EC:2.5.1.144]
107406999  D-3-phosphoglycerate dehydrogenase 1, chloroplastic [KO:K00058] [EC:1.1.1.95 1.1.1.399]
107433022  D-3-phosphoglycerate dehydrogenase 2, chloroplastic [KO:K00058] [EC:1.1.1.95 1.1.1.399]
107424359  phosphoserine aminotransferase 2, chloroplastic [KO:K00831] [EC:2.6.1.52]
Compound
C00019  S-Adenosyl-L-methionine
C00021  S-Adenosyl-L-homocysteine
C00022  Pyruvate
C00041  L-Alanine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00065  L-Serine
C00073  L-Methionine
C00094  Sulfite
C00097  L-Cysteine
C00109  2-Oxobutanoate
C00155  L-Homocysteine
C00170  5'-Methylthioadenosine
C00197  3-Phospho-D-glycerate
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00409  Methanethiol
C00441  L-Aspartate 4-semialdehyde
C00491  L-Cystine
C00506  L-Cysteate
C00606  3-Sulfino-L-alanine
C00793  D-Cysteine
C00957  Mercaptopyruvate
C00979  O-Acetyl-L-serine
C01005  O-Phospho-L-serine
C01077  O-Acetyl-L-homoserine
C01118  O-Succinyl-L-homoserine
C01137  S-Adenosylmethioninamine
C01180  4-Methylthio-2-oxobutanoic acid
C01234  1-Aminocyclopropane-1-carboxylate
C01817  L-Homocystine
C01962  Thiocysteine
C02218  Dehydroalanine
C02291  L-Cystathionine
C02356  (S)-2-Aminobutanoate
C02989  L-Methionine S-oxide
C03082  4-Phospho-L-aspartate
C03089  5-Methylthio-D-ribose
C03145  N-Formylmethionine
C03232  3-Phosphonooxypyruvate
C03431  S-Inosyl-L-homocysteine
C03539  S-Ribosyl-L-homocysteine
C04188  S-Methyl-5-thio-D-ribose 1-phosphate
C04582  S-Methyl-5-thio-D-ribulose 1-phosphate
C05324  Nicotianamine
C05524  Aminoacyl-L-methionine
C05526  S-Glutathionyl-L-cysteine
C05527  3-Sulfinylpyruvate
C05528  3-Sulfopyruvate
C05823  3-Mercaptolactate
C05824  S-Sulfo-L-cysteine
C06547  Ethylene
C08276  3-(Methylthio)propanoate
C09306  Sulfur dioxide
C11437  1-Deoxy-D-xylulose 5-phosphate
C11481  HSO3-
C11499  (S)-3-Sulfolactate
C11537  (2R)-3-Sulfolactate
C15606  1,2-Dihydroxy-5-(methylthio)pent-1-en-3-one
C15650  2,3-Diketo-5-methylthiopentyl-1-phosphate
C15651  2-Hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
C18049  N-Acyl-L-homoserine lactone
C19787  5'-S-Methyl-5'-thioinosine
C21015  gamma-L-Glutamyl-L-2-aminobutyrate
C21016  Ophthalmate
C22359  S-Methyl-1-thio-D-xylulose 5-phosphate
Reference
  Authors
Sekowska A, Denervaud V, Ashida H, Michoud K, Haas D, Yokota A, Danchin A
  Title
Bacterial variations on the methionine salvage pathway.
  Journal
BMC Microbiol 4:9 (2004)
DOI:10.1186/1471-2180-4-9
Reference
  Authors
Ashida H, Saito Y, Kojima C, Kobayashi K, Ogasawara N, Yokota A.
  Title
A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO.
  Journal
Science 302:286-90 (2003)
DOI:10.1126/science.1086997
Reference
  Authors
Sekowska A, Danchin A.
  Title
The methionine salvage pathway in Bacillus subtilis.
  Journal
BMC Microbiol 2:8 (2002)
DOI:10.1186/1471-2180-2-8
Reference
  Authors
Berger BJ, English S, Chan G, Knodel MH.
  Title
Methionine regeneration and aminotransferases in Bacillus subtilis, Bacillus cereus, and Bacillus anthracis.
  Journal
J Bacteriol 185:2418-31 (2003)
DOI:10.1128/JB.185.8.2418-2431.2003
Reference
  Authors
Goyer A, Collakova E, Shachar-Hill Y, Hanson AD
  Title
Functional characterization of a methionine gamma-lyase in Arabidopsis and its implication in an alternative to the reverse trans-sulfuration pathway.
  Journal
Plant Cell Physiol 48:232-42 (2007)
DOI:10.1093/pcp/pcl055
Reference
  Authors
Rebeille F, Jabrin S, Bligny R, Loizeau K, Gambonnet B, Van Wilder V, Douce R, Ravanel S
  Title
Methionine catabolism in Arabidopsis cells is initiated by a gamma-cleavage process and leads to S-methylcysteine and isoleucine syntheses.
  Journal
Proc Natl Acad Sci U S A 103:15687-92 (2006)
DOI:10.1073/pnas.0606195103
Reference
  Authors
Pirkov I, Norbeck J, Gustafsson L, Albers E
  Title
A complete inventory of all enzymes in the eukaryotic methionine salvage pathway.
  Journal
FEBS J 275:4111-20 (2008)
DOI:10.1111/j.1742-4658.2008.06552.x
Reference
  Authors
Ashida H, Saito Y, Kojima C, Yokota A
  Title
Enzymatic characterization of 5-methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway in Bacillus subtilis.
  Journal
Biosci Biotechnol Biochem 72:959-67 (2008)
DOI:10.1271/bbb.70651
Reference
  Authors
Kitabatake M, So MW, Tumbula DL, Soll D
  Title
Cysteine biosynthesis pathway in the archaeon Methanosarcina barkeri encoded by acquired bacterial genes?
  Journal
J Bacteriol 182:143-5 (2000)
DOI:10.1128/JB.182.1.143-145.2000
Reference
  Authors
Mino K, Ishikawa K
  Title
Characterization of a novel thermostable O-acetylserine sulfhydrylase from Aeropyrum pernix K1.
  Journal
J Bacteriol 185:2277-84 (2003)
DOI:10.1128/JB.185.7.2277-2284.2003
Reference
  Authors
Tanabe S
  Title
Development of assay methods for endogenous inorganic sulfur compounds and sulfurtransferases and evaluation of the physiological functions of bound sulfur.
  Journal
Yakugaku Zasshi 128:881-900 (2008)
DOI:10.1248/yakushi.128.881
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Gutierrez JA, Crowder T, Rinaldo-Matthis A, Ho MC, Almo SC, Schramm VL
  Title
Transition state analogs of 5'-methylthioadenosine nucleosidase disrupt quorum sensing.
  Journal
Nat Chem Biol 5:251-7 (2009)
DOI:10.1038/nchembio.153
Related
pathway
zju00010  Glycolysis / Gluconeogenesis
zju00250  Alanine, aspartate and glutamate metabolism
zju00260  Glycine, serine and threonine metabolism
zju00290  Valine, leucine and isoleucine biosynthesis
zju00430  Taurine and hypotaurine metabolism
zju00480  Glutathione metabolism
zju00620  Pyruvate metabolism
zju00640  Propanoate metabolism
zju00770  Pantothenate and CoA biosynthesis
zju00900  Terpenoid backbone biosynthesis
zju00920  Sulfur metabolism
KO pathway
ko00270   
LinkDB

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