KEGG   PATHWAY: seur03440
Entry
seur03440                   Pathway                                
Name
Homologous recombination - Shewanella eurypsychrophilus
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
seur03440  Homologous recombination
seur03440

Other DBs
GO: 0000724
Organism
Shewanella eurypsychrophilus [GN:seur]
Gene
FM038_000010  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
FM038_000015  recF; DNA replication/repair protein RecF [KO:K03629]
FM038_000520  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
FM038_003135  [KO:K03111]
FM038_004475  recJ; single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
FM038_005065  [KO:K02339] [EC:2.7.7.7]
FM038_005770  recO; DNA repair protein RecO [KO:K03584]
FM038_006900  [KO:K02342] [EC:2.7.7.7]
FM038_007750  [KO:K04067]
FM038_008980  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
FM038_008990  recR; recombination mediator RecR [KO:K06187]
FM038_010020  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
FM038_010725  recD; exodeoxyribonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
FM038_010730  recB; exodeoxyribonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
FM038_010735  recC; exodeoxyribonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
FM038_010865  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
FM038_011040  ruvC; crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
FM038_011045  ruvA; Holliday junction branch migration protein RuvA [KO:K03550]
FM038_011050  ruvB; Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
FM038_013100  [KO:K02342] [EC:2.7.7.7]
FM038_016795  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
FM038_017850  recA; recombinase RecA [KO:K03553]
FM038_018970  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
FM038_021495  priB; primosomal replication protein N [KO:K02686]
FM038_022665  priA; primosomal protein N' [KO:K04066] [EC:5.6.2.4]
FM038_023605  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
FM038_25790  [KO:K02342] [EC:2.7.7.7]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   

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