DNA Repair and Recombination Proteins - Gossypium hirsutum (upland cotton)

[ Brite menu | Download htext | Download json | Help ]
Search

1st Level  2nd Level  3rd Level  4th Level  5th Level  6th Level 

     KO
 Eukaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
       AP endonucleases
       Long Patch-BER factors
         DNA polymerase delta complex
         DNA polymerase epsilon complex
         107935704 proliferating cell nuclear antigen
K04802 PCNA; proliferating cell nuclear antigen 
         107950214 proliferating cell nuclear antigen
K04802 PCNA; proliferating cell nuclear antigen 
         121212680 proliferating cell nuclear antigen-like
K04802 PCNA; proliferating cell nuclear antigen 
         121215525 proliferating cell nuclear antigen
K04802 PCNA; proliferating cell nuclear antigen 
         107916254 flap endonuclease 1
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] 
         107918535 flap endonuclease 1 isoform X1
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] 
         107896560 flap endonuclease 1
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] 
         107895056 flap endonuclease 1-like isoform X1
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] 
         107887527 DNA ligase 1
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
         107927137 DNA ligase 1 isoform X1
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
       Short Patch-BER factors
       Other BER factors
     NER (nucleotide excision repair)
       GGR (global genome repair) factors
       TCR (transcription coupled repair) factors
       TFIIH complex
       RPA (replication factor A)
       Other NER factors
         107889799 DNA excision repair protein ERCC-1
         107893275 DNA excision repair protein ERCC-1
         107886412 DNA repair endonuclease UVH1-like isoform X2
         107919892 DNA repair endonuclease UVH1 isoform X1
         107958580 DNA repair protein UVH3 isoform X1
         107955581 DNA repair protein UVH3-like isoform X1
         107887527 DNA ligase 1
         107927137 DNA ligase 1 isoform X1
         107937284 MMS19 nucleotide excision repair protein homolog isoform X1
         107937347 MMS19 nucleotide excision repair protein homolog isoform X1
         107934903 cullin-3A
         107898717 cullin-3A
         107904068 cullin-3B
         107948715 cullin-3A isoform X1
         107890426 cullin-3A-like isoform X1
         107943614 elongin-C-like
         107935050 elongin-C
         107886021 elongin-C-like isoform X1
         107909190 uncharacterized protein LOC107909190
         107928403 uncharacterized protein LOC107928403
         107888510 transcription elongation factor B polypeptide 3
         107931305 transcription elongation factor B polypeptide 3
K10849 ERCC1; DNA excision repair protein ERCC-1 
K10849 ERCC1; DNA excision repair protein ERCC-1 
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] 
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] 
K10846 ERCC5; DNA excision repair protein ERCC-5 
K10846 ERCC5; DNA excision repair protein ERCC-5 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K15075 MET18; DNA repair/transcription protein MET18/MMS19 
K15075 MET18; DNA repair/transcription protein MET18/MMS19 
K03869 CUL3; cullin 3 
K03869 CUL3; cullin 3 
K03869 CUL3; cullin 3 
K03869 CUL3; cullin 3 
K03869 CUL3; cullin 3 
K03872 ELOC; elongin-C 
K03872 ELOC; elongin-C 
K03872 ELOC; elongin-C 
K03873 ELOB; elongin-B 
K03873 ELOB; elongin-B 
K15077 ELA1; elongin-A 
K15077 ELA1; elongin-A 
     MMR (mismatch excision repair)
       Mismatch and loop recognition factors
       MutL homologs
       DNA polymerase delta complex
       RPA (replication factor A)
       RFC (replication factor C)
       Other MMR factors
         107935704 proliferating cell nuclear antigen
         107950214 proliferating cell nuclear antigen
         121212680 proliferating cell nuclear antigen-like
         121215525 proliferating cell nuclear antigen
         107888799 exonuclease 1-like isoform X1
         107924883 exonuclease 1 isoform X1
         107945843 exonuclease 1
         121222308 exonuclease 1-like isoform X1
         107887527 DNA ligase 1
         107927137 DNA ligase 1 isoform X1
         107901575 WD repeat-containing protein 76
         107893659 WD repeat-containing protein 76
K04802 PCNA; proliferating cell nuclear antigen 
K04802 PCNA; proliferating cell nuclear antigen 
K04802 PCNA; proliferating cell nuclear antigen 
K04802 PCNA; proliferating cell nuclear antigen 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K24755 WDR76; WD repeat-containing protein 76 
K24755 WDR76; WD repeat-containing protein 76 
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Check point factors
   Other factors with a suspected DNA repair function
 
 Prokaryotic type

[ BRITE | KEGG2 | KEGG ]
Last updated: March 29, 2024