09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:plat03030]
03410 Base excision repair [PATH:plat03410]
03420 Nucleotide excision repair [PATH:plat03420]
03430 Mismatch repair [PATH:plat03430]
03440 Homologous recombination [PATH:plat03440]
03450 Non-homologous end-joining [PATH:plat03450]
C6W10_29050 Ku protein C6W10_29055 DNA ligase C6W10_12235 ATP-dependent DNA ligase C6W10_29060 ATP-dependent DNA ligase C6W10_22105 ATP-dependent DNA ligase
K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:plat03000]
03021 Transcription machinery [BR:plat03021]
03019 Messenger RNA biogenesis [BR:plat03019]
03041 Spliceosome
03011 Ribosome [BR:plat03011]
03009 Ribosome biogenesis [BR:plat03009]
03016 Transfer RNA biogenesis [BR:plat03016]
03012 Translation factors [BR:plat03012]
03110 Chaperones and folding catalysts [BR:plat03110]
04131 Membrane trafficking [BR:plat04131]
04121 Ubiquitin system [BR:plat04121]
03051 Proteasome [BR:plat03051]
03032 DNA replication proteins [BR:plat03032]
03036 Chromosome and associated proteins [BR:plat03036]
03400 DNA repair and recombination proteins [BR:plat03400]
C6W10_30175 cysteine methyltransferase C6W10_10085 methylated-DNA--protein-cysteine methyltransferase C6W10_24240 uracil-DNA glycosylase C6W10_31590 DNA-3-methyladenine glycosylase C6W10_07395 adenine glycosylase C6W10_07110 nth; endonuclease III C6W10_29085 helicase C6W10_30765 NUDIX hydrolase C6W10_10130 DNA mismatch repair protein MutT C6W10_04400 NUDIX hydrolase C6W10_35810 NUDIX hydrolase C6W10_24065 NUDIX hydrolase C6W10_24070 NUDIX hydrolase C6W10_20555 NUDIX hydrolase C6W10_34095 NUDIX hydrolase C6W10_21410 NUDIX hydrolase C6W10_26030 DNA mismatch repair protein MutT C6W10_35120 hypothetical protein C6W10_15165 dUTP diphosphatase C6W10_33490 G/U mismatch-specific DNA glycosylase C6W10_23665 uracil-DNA glycosylase C6W10_14820 uracil-DNA glycosylase C6W10_10090 AraC family transcriptional regulator C6W10_09000 DNA-3-methyladenine glycosylase I C6W10_34125 endonuclease VIII C6W10_13805 DNA-formamidopyrimidine glycosylase C6W10_14700 DNA glycosylase C6W10_11045 DNA glycosylase C6W10_32975 xth; exodeoxyribonuclease III C6W10_17795 endonuclease C6W10_30220 deoxyribonuclease IV C6W10_26475 endonuclease IV C6W10_11330 endonuclease V C6W10_13155 DNA ligase (NAD(+)) LigA C6W10_36060 DNA polymerase I C6W10_36330 excinuclease ABC subunit A C6W10_02690 excinuclease ABC subunit A C6W10_36095 excinuclease ABC subunit B C6W10_36340 excinuclease ABC subunit C C6W10_35935 hypothetical protein C6W10_10375 DNA helicase UvrD C6W10_10435 ATP-dependent DNA helicase C6W10_24000 pcrA; DNA helicase PcrA C6W10_24715 DNA-directed RNA polymerase subunit beta C6W10_24710 DNA-directed RNA polymerase subunit beta' C6W10_24525 DNA-directed RNA polymerase subunit alpha C6W10_32000 DNA-directed RNA polymerase subunit omega C6W10_23825 mfd; transcription-repair coupling factor C6W10_10005 exodeoxyribonuclease VII large subunit C6W10_10000 exodeoxyribonuclease VII small subunit C6W10_26095 DNA polymerase III subunit alpha C6W10_30005 DNA polymerase III subunit beta C6W10_27645 MerR family transcriptional regulator C6W10_35145 holA; DNA polymerase III subunit delta C6W10_28900 DNA polymerase III subunit delta' C6W10_26785 DEDD exnuclease domain-containing protein C6W10_06775 DNA polymerase III subunit gamma and tau C6W10_30235 single-stranded DNA-binding protein C6W10_22080 single-stranded DNA-binding protein C6W10_24880 DNA methyltransferase C6W10_31410 ATP-dependent RecD-like DNA helicase C6W10_14840 recA; recombinase RecA C6W10_32380 Holliday junction branch migration protein RuvA C6W10_32375 Holliday junction branch migration DNA helicase RuvB C6W10_32385 crossover junction endodeoxyribonuclease RuvC C6W10_31985 primosome assembly protein PriA C6W10_15475 chromosome segregation protein SMC C6W10_15480 exonuclease sbcCD subunit D C6W10_07420 DNA repair protein RadA C6W10_29995 DNA replication/repair protein RecF C6W10_13745 ATP-dependent DNA helicase RecG C6W10_35000 DNA repair protein RecO C6W10_06795 recombination protein RecR C6W10_22020 recN; DNA repair protein RecN C6W10_29050 Ku protein C6W10_29055 DNA ligase C6W10_12235 ATP-dependent DNA ligase C6W10_29060 ATP-dependent DNA ligase C6W10_22105 ATP-dependent DNA ligase C6W10_29975 DNA gyrase subunit A C6W10_18110 DNA topoisomerase IV C6W10_29980 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B C6W10_18105 DNA topoisomerase IV subunit B C6W10_28870 topA; type I DNA topoisomerase C6W10_32620 DNA topoisomerase C6W10_04085 DNA topoisomerase C6W10_13620 DNA-binding protein C6W10_25250 recombinase RecQ C6W10_32610 recombinase RecQ C6W10_28425 recQ; DNA helicase RecQ C6W10_26285 DNA polymerase IV C6W10_14945 repressor LexA C6W10_26305 DNA repair protein C6W10_26300 error-prone DNA polymerase C6W10_14845 RecX family transcriptional regulator C6W10_08215 ATP-dependent helicase C6W10_14730 DEAD/DEAH box helicase C6W10_13625 NUDIX hydrolase C6W10_21980 ADP-ribose pyrophosphatase C6W10_03835 ribonucleoside-diphosphate reductase subunit alpha C6W10_14960 vitamin B12-dependent ribonucleotide reductase C6W10_03830 ribonucleoside-diphosphate reductase C6W10_14420 DHH family phosphoesterase
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K03546 sbcC; DNA repair protein SbcC/Rad50 K03547 sbcD; DNA repair protein SbcD/Mre11 K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K14161 imuB; protein ImuB K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
03029 Mitochondrial biogenesis [BR:plat03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Plantactinospora sp. BB1 KEGG Orthology (KO) - Plantactinospora sp. BB1