SSDB Best Search Result

Entry:amn:RAM_26505 (287 a.a.)
Name:ATP-dependent DNA ligase
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 76 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
amd:AMED_5203 ATP-dependent DNA ligase                  K01971     287     1960     1.000      287     
sen:SACE_3394 ATP-dependent DNA ligase                             292     1071     0.592      277     
sco:SCO6498 conserved hypothetical protein SC1E6.07     K01971     319      787     0.477      279     
sgu:SGLAU_27360 DNA polymerase LigD, polymerase domain- K01971     308      771     0.453      276     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      704     0.404      275     
scl:sce3523 unnamed protein product; High confidence in K01971     762      701     0.411      285     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      691     0.404      272     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      678     0.381      273     
sno:Snov_0819 DNA ligase D                              K01971     842      670     0.383      287     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      668     0.408      265     
cpy:Cphy_1729 DNA ligase D                              K01971     813      658     0.371      272     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      657     0.399      273     
swi:Swit_5282 DNA ligase D                              K01971     658      656     0.387      266     
ssy:SLG_04290 putative DNA ligase                       K01971     835      655     0.373      268     
dsy:DSY0616 hypothetical protein                        K01971     818      646     0.373      271     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      644     0.379      272     
sct:SCAT_5514 conserved protein of unknown function                335      641     0.388      286     
pde:Pden_4186 conserved hypothetical protein            K01971     330      627     0.405      257     
sma:SAVERM_1696 putative DNA primase, small subunit                338      627     0.383      290     
ret:RHE_CH00617 putative DNA ligase protein             K01971     659      619     0.375      269     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      616     0.360      272     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      616     0.365      288     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      615     0.366      276     
sro:Sros_6714 DNA primase small subunit                            334      604     0.374      286     
mva:Mvan_5542 conserved hypothetical protein                       349      601     0.359      290     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      601     0.352      290     
mul:MUL_4339 conserved hypothetical protein                        346      600     0.372      290     
mmi:MMAR_5265 conserved hypothetical protein                       346      599     0.369      290     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930      599     0.355      290     
msm:MSMEG_6301 DNA polymerase LigD, polymerase domain              350      597     0.382      280     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      596     0.380      242     
mta:Moth_2082 conserved hypothetical protein            K01971     306      594     0.355      290     
mab:MAB_4341 Conserved hypothetical protein                        409      593     0.365      282     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      590     0.344      285     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      589     0.350      274     
ppu:PP_3260 DNA ligase D                                K01971     833      585     0.347      291     
ase:ACPL_7075 DNA ligase (ATP)                                     341      584     0.367      275     
nfa:NFA_25590 hypothetical protein                                 333      583     0.339      271     
mtu:Rv3730c hypothetical protein                                   346      582     0.368      285     
mtc:MT3835 conserved hypothetical protein                          346      582     0.368      285     
gpo:GPOL_c47200 DNA primase, small subunit                         358      578     0.342      298     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      576     0.333      288     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      572     0.342      292     
xau:Xaut_4365 DNA ligase D                              K01971     886      569     0.355      293     
rle:pRL120229 putative DNA ligase family protein        K01971     881      568     0.345      293     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      566     0.330      288     
stp:Strop_1543 DNA primase, small subunit                          341      562     0.361      277     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      562     0.349      292     
rer:RER_49750 conserved hypothetical protein                       346      560     0.362      290     
sgr:SGR_1023 conserved hypothetical protein                        345      557     0.353      289     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      555     0.350      274     
rha:RHA1_ro05108 possible DNA ligase (ATP), N-terminal             342      555     0.345      290     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      550     0.348      276     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      546     0.367      275     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      541     0.372      266     
nca:Noca_1237 ATP dependent DNA ligase                  K01971     304      535     0.358      271     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      522     0.322      292     
phe:Phep_1702 DNA ligase D                              K01971     877      516     0.331      245     
rpa:TX73_018915 DNA ligase D                            K01971     914      516     0.328      290     
chy:CHY_0025 conserved hypothetical protein             K01971     293      511     0.321      274     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      466     0.314      271     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      461     0.309      301     
oih:OB3034 hypothetical conserved protein               K01971     595      447     0.292      277     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      433     0.280      268     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      394     0.284      271     
ksk:KSE_05320 hypothetical protein                      K01971     173      345     0.413      155     
dvu:DVUA0044 conserved hypothetical protein                        325      135     0.235      204     
ddi:DDB_G0274213 U4/U6 small nuclear ribonucleoprotein  K12843     571      123     0.254      142     
gmx:100784326 R3H and SUZ domain-containing protein                355      119     0.305      105     
tel:tll0665 dTDP-glucose 4,6-dehydratase                K08678     318      119     0.293      133     
ani:ANIA_07282 hypothetical protein                                529      116     0.286      84      
csv:101207675 uncharacterized protein LOC101207675                 645      115     0.315      108     
vg:5176748 Pseudomonas phage EL; virion structural prot            431      114     0.255      165     
xom:XOO1905 conserved hypothetical protein                         143      109     0.364      55      
smo:SELMODRAFT_122991 hypothetical protein                         108      104     0.309      110     
sly:138348806 uncharacterized protein                              143       93     0.250      104     

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