SSDB Best Search Result

Entry:sus:Acid_5076 (304 a.a.)
Name:conserved hypothetical protein
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 83 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
mta:Moth_2082 conserved hypothetical protein            K01971     306      821     0.433      293     
phe:Phep_1702 DNA ligase D                              K01971     877      759     0.377      300     
mab:MAB_4341 Conserved hypothetical protein                        409      749     0.399      291     
sct:SCAT_5514 conserved protein of unknown function                335      730     0.403      283     
mva:Mvan_0396 conserved hypothetical protein                       412      713     0.406      276     
sma:SAVERM_1696 putative DNA primase, small subunit                338      698     0.390      282     
sco:SCO6709 conserved hypothetical protein                         341      696     0.393      280     
sgu:SGLAU_28045 hypothetical protein                               336      695     0.395      281     
sro:Sros_6714 DNA primase small subunit                            334      693     0.407      290     
msm:MSMEG_0597 conserved hypothetical protein                      426      688     0.391      294     
chy:CHY_0025 conserved hypothetical protein             K01971     293      688     0.379      282     
mmi:MMAR_0527 conserved protein                                    420      686     0.387      284     
mul:MUL_1190 conserved protein                                     423      685     0.380      292     
sgr:SGR_1023 conserved hypothetical protein                        345      679     0.365      296     
mtu:Rv0269c hypothetical protein                                   397      668     0.412      272     
mtc:MT0282 conserved hypothetical protein                          394      668     0.412      272     
nca:Noca_1237 ATP dependent DNA ligase                  K01971     304      637     0.365      301     
stp:Strop_2095 DNA primase, small subunit                          360      635     0.371      302     
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670      623     0.359      301     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      620     0.358      302     
rha:RHA1_ro05108 possible DNA ligase (ATP), N-terminal             342      616     0.384      292     
nfa:NFA_25590 hypothetical protein                                 333      613     0.360      286     
gpo:GPOL_c30660 DNA polymerase LigD                                318      607     0.355      279     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      607     0.361      277     
sen:SACE_1849 possible DNA ligase (ATP)                            347      603     0.350      286     
ase:ACPL_7020 DNA ligase (ATP)                                     319      593     0.351      279     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      591     0.347      274     
rer:RER_49750 conserved hypothetical protein                       346      589     0.359      290     
ccyc:SCMU_06830 hypothetical protein                               727      582     0.366      254     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      561     0.335      272     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      556     0.347      294     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      556     0.338      266     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      555     0.355      273     
swi:Swit_5282 DNA ligase D                              K01971     658      541     0.338      281     
scl:sce3523 unnamed protein product; High confidence in K01971     762      523     0.348      276     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      519     0.317      287     
cpy:Cphy_1729 DNA ligase D                              K01971     813      517     0.335      281     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      517     0.322      270     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      513     0.324      272     
pde:Pden_4186 conserved hypothetical protein            K01971     330      512     0.347      248     
sno:Snov_0819 DNA ligase D                              K01971     842      507     0.316      288     
dsy:DSY0616 hypothetical protein                        K01971     818      506     0.306      284     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      506     0.319      270     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      505     0.335      266     
ssy:SLG_04290 putative DNA ligase                       K01971     835      495     0.310      271     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      489     0.305      266     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      488     0.292      288     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930      480     0.312      285     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      478     0.295      264     
ret:RHE_CH00617 putative DNA ligase protein             K01971     659      477     0.307      296     
ppu:PP_3260 DNA ligase D                                K01971     833      477     0.319      273     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      472     0.314      283     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      462     0.311      257     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      460     0.316      253     
oih:OB3034 hypothetical conserved protein               K01971     595      456     0.287      303     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      451     0.299      274     
rpa:TX73_018915 DNA ligase D                            K01971     914      451     0.315      254     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      450     0.295      305     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      444     0.299      274     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      436     0.290      286     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      431     0.317      249     
xau:Xaut_4365 DNA ligase D                              K01971     886      413     0.310      252     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      406     0.272      272     
rle:pRL120229 putative DNA ligase family protein        K01971     881      398     0.289      291     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      390     0.324      238     
ksk:KSE_05320 hypothetical protein                      K01971     173      314     0.376      170     
ame:406092 cGMP-dependent protein kinase foraging       K07376     678      130     0.265      189     
mja:MJ_ECS07 hypothetical protein                                  441      130     0.215      288     
vg:80538781 Plasmopara viticola lesion associated ourmi            584      119     0.268      239     
xla:108716771 acid sphingomyelinase-like phosphodiester K01128     450      118     0.301      163     
npu:Npun_R0751 phage integrase family protein                      400      117     0.212      151     
nve:5509360 uncharacterized protein LOC5509360 isoform             322      115     0.279      68      
fgr:FGSG_08654 hypothetical protein                                266      114     0.243      148     
ath:AT5G07610 F-box family protein                                 420      111     0.191      235     
csv:101222732 glycosyltransferase BC10 isoform X1                  390      110     0.215      251     
tps:THAPSDRAFT_12014 predicted protein                             438      110     0.315      73      
gmx:121173912 uncharacterized protein LOC121173912                 134      109     0.254      71      
cit:102615094 7-methylxanthosine synthase 1-like isofor            380      107     0.248      113     
tru:101061204 growth factor receptor-bound protein 2a i K04364     210      107     0.258      155     
mdm:103430148 FAD-linked sulfhydryl oxidase ERV1        K17783     203      105     0.304      79      
plu:plu0132 unnamed protein product; Hypothetical prote            249      105     0.264      159     
ppp:112281825 thioredoxin-like 3-2, chloroplastic                  192      103     0.292      89      
tca:107397422 uncharacterized LOC107397422                         323      102     0.215      158     

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