GFIT result for
nok
|
GFIT result for
nok
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| nok:FAY22_00380 (827 a.a.) |
-- |
K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > jaj:EKL02_16165(860) | 862 | 83.3 | 4379 | 22 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mms:mma_0493(826) | 833 | 84.0 | 4345 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase primary sigma factor; K03086 RNA polymerase primary sigma factor | |
| > cfu:CFU_1025(831) | 836 | 83.0 | 4324 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > hrb:Hrubri_0738(850) | 852 | 82.3 | 4294 | 23 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hfr:G5S34_04260(850) | 854 | 81.3 | 4287 | 25 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hse:Hsero_0870(850) | 851 | 81.8 | 4287 | 24 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hsz:ACP92_04370(850) | 851 | 81.8 | 4287 | 24 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > hhf:E2K99_04215(850) | 854 | 81.5 | 4283 | 26 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > glc:JQN73_04935(850) | 852 | 81.5 | 4277 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hee:hmeg3_19485(863) | 868 | 81.7 | 4274 | 22 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > har:HEAR0442(800) | 809 | 84.3 | 4270 | 4 | <- | K03086 | rpoD | putative RNA polymerase sigma factor rpoD (Sigma-70); K03086 RNA polymerase primary sigma factor | |
| > hht:F506_07150(859) | 865 | 80.7 | 4248 | 15 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > und:UNDKW_1456(865) | 851 | 79.6 | 4246 | 8 | <- | K03086 | rpoD | hypothetical protein; K03086 RNA polymerase primary sigma factor | |
| > actb:RHM62_18650(?) | 843 | 79.8 | 4180 | 0 | -- | - | |||
| > care:LT85_1165(752) | 752 | 87.8 | 4178 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mpli:E1742_11645(754) | 762 | 85.3 | 4148 | 10 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cpra:CPter91_1122(745) | 746 | 87.3 | 4145 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > dug:HH213_06120(747) | 745 | 87.1 | 4140 | 6 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mum:FCL38_15805(757) | 764 | 85.2 | 4139 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mfla:GO485_11325(752) | 763 | 85.7 | 4134 | 10 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > masy:DPH57_24540(744) | 743 | 87.3 | 4133 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > masz:C9I28_24605(745) | 743 | 87.2 | 4127 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > manc:IV454_02620(750) | 758 | 85.6 | 4126 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jri:P9875_25445(746) | 746 | 87.3 | 4121 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mtim:DIR46_17585(753) | 752 | 86.8 | 4121 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jal:BZG29_24365(747) | 747 | 87.1 | 4120 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mali:EYF70_02765(756) | 764 | 85.2 | 4117 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jah:JAB4_050230(746) | 746 | 87.1 | 4116 | 5 | <- | K03086 | rpoD | rpoD_2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jlv:G3257_25065(746) | 746 | 87.3 | 4115 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jaz:YQ44_03205(746) | 746 | 87.1 | 4113 | 4 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > upv:EJN92_03990(897) | 845 | 76.9 | 4112 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jas:FJQ89_13975(746) | 746 | 87.0 | 4106 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mnr:ACZ75_23525(746) | 746 | 86.9 | 4103 | 9 | <- | K03086 | rpoD | RNA polymerase subunit sigma-70; K03086 RNA polymerase primary sigma factor | |
| > mass:CR152_13020(738) | 736 | 87.1 | 4102 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jag:GJA_890(734) | 737 | 87.5 | 4101 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jsv:CNX70_24740(746) | 746 | 87.0 | 4101 | 6 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tct:PX653_26035(728) | 727 | 87.6 | 4100 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rug:QC826_03395(733) | 732 | 88.3 | 4095 | 3 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mvar:MasN3_44230(751) | 749 | 86.1 | 4091 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > masw:AM586_23910(734) | 733 | 87.7 | 4085 | 6 | <- | K03086 | rpoD | RNA polymerase subunit sigma-70; K03086 RNA polymerase primary sigma factor | |
| > dzo:SR858_03060(?) | 734 | 87.3 | 4084 | 0 | -- | - | |||
| > meny:LSQ66_17290(?) | 746 | 86.7 | 4083 | 0 | -- | - | |||
| > tmj:P0M04_13345(736) | 734 | 87.2 | 4076 | 0 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mlir:LPB04_09475(?) | 748 | 86.0 | 4074 | 0 | -- | - | |||
| > upi:EJG51_007715(747) | 747 | 83.0 | 4012 | 3 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ofo:BRW83_0800(819) | 821 | 73.4 | 3793 | 1 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > oal:NB647_03480(827) | 760 | 76.7 | 3734 | 1 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mfy:HH212_12175(642) | 641 | 88.5 | 3650 | 6 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ovb:NB640_03710(734) | 716 | 78.5 | 3627 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cox:E0W60_22885(847) | 849 | 67.0 | 3489 | 19 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > reh:H16_A2725(827) | 839 | 67.5 | 3482 | 13 | <- | K03086 | rpoD | rpoD1; DNA-directed RNA polymerase sigma subunit (RpoD); K03086 RNA polymerase primary sigma factor | |
| > rpj:N234_15435(850) | 841 | 66.9 | 3479 | 14 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > cuk:KB879_25560(850) | 836 | 67.6 | 3466 | 20 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cpau:EHF44_09980(856) | 835 | 66.9 | 3461 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuh:BJN34_14680(850) | 838 | 66.9 | 3456 | 16 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bmj:BMULJ_03703(804) | 825 | 68.4 | 3454 | 47 | <- | rpoD; RNA polymerase primary sigma factor | |||
| > bmu:Bmul_4813(804) | 825 | 68.4 | 3454 | 50 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rmn:TK49_14525(827) | 826 | 67.2 | 3453 | 16 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > tcar:U0034_27330(?) | 828 | 67.3 | 3450 | 0 | -- | - | |||
| > bac:BamMC406_3783(805) | 821 | 68.2 | 3449 | 30 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bte:BTH_II0621(800) | 803 | 68.5 | 3445 | 43 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tvl:FAZ95_37355(?) | 817 | 67.8 | 3442 | 0 | -- | - | |||
| > burk:DM992_30230(805) | 810 | 68.5 | 3440 | 30 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bann:JFN94_22185(805) | 821 | 68.1 | 3437 | 30 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsl:RPSI07_1208(876) | 827 | 67.2 | 3437 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rme:Rmet_2606(855) | 834 | 66.4 | 3435 | 12 | <- | K03086 | rpoD | rpoD1; RNA polymerase sigma D factor (housekeeping sigma factor); K03086 RNA polymerase primary sigma factor | |
| > bam:Bamb_3257(805) | 821 | 67.8 | 3434 | 36 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bari:NLX30_33875(805) | 822 | 68.2 | 3434 | 34 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bur:Bcep18194_B2204(808) | 813 | 68.8 | 3433 | 31 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pew:KZJ38_35870(800) | 800 | 69.3 | 3433 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bvi:Bcep1808_4264(809) | 813 | 68.3 | 3428 | 39 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pfib:PI93_012115(789) | 801 | 69.2 | 3428 | 18 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgl:bglu_2g15870(805) | 808 | 68.8 | 3426 | 24 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > baen:L3V59_34395(?) | 826 | 68.0 | 3425 | 0 | -- | - | |||
| > bch:Bcen2424_3886(805) | 822 | 68.0 | 3423 | 29 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpm:BURPS1710b_A0833(800) | 797 | 68.3 | 3421 | 89 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > para:BTO02_20190(799) | 811 | 67.9 | 3417 | 12 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pacs:FAZ98_17775(798) | 821 | 68.2 | 3412 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgp:CUJ91_31075(807) | 825 | 68.0 | 3412 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgd:bgla_2g21200(805) | 800 | 68.1 | 3410 | 19 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD family protein; K03086 RNA polymerase primary sigma factor | |
| > pacp:FAZ97_21915(802) | 810 | 68.4 | 3408 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rnc:GO999_05790(828) | 829 | 66.6 | 3408 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpu:CDC45_11305(828) | 829 | 66.6 | 3408 | 6 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cbw:RR42_m3043(827) | 832 | 67.2 | 3407 | 20 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgf:BC1003_4533(803) | 806 | 68.0 | 3404 | 9 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpi:Rpic_2420(829) | 843 | 66.2 | 3403 | 8 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgp:BGL_2c21380(805) | 808 | 67.9 | 3402 | 23 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > bpla:bpln_2g21580(805) | 808 | 67.9 | 3402 | 28 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pmeg:FNZ07_06525(802) | 811 | 68.8 | 3402 | 17 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rse:F504_2174(819) | 820 | 66.5 | 3400 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgis:I6I06_17615(795) | 806 | 68.2 | 3399 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppai:E1956_15675(?) | 824 | 68.0 | 3399 | 0 | -- | - | |||
| > ptro:G5S35_22580(802) | 825 | 67.8 | 3399 | 16 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsc:RCFBP_11179(873) | 825 | 66.3 | 3398 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > reu:Reut_A0888(783) | 773 | 71.3 | 3397 | 25 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcj:CUJ87_26830(803) | 813 | 67.7 | 3396 | 11 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsg:JK151_08480(838) | 825 | 66.5 | 3394 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsn:RSPO_c01215(873) | 824 | 66.1 | 3393 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rsy:RSUY_12400(873) | 824 | 66.1 | 3393 | 13 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cnan:A2G96_17265(?) | 760 | 71.4 | 3392 | 0 | -- | - | |||