KEGG   PATHWAY: aof03020
Entry
aof03020                    Pathway                                
Name
RNA polymerase - Asparagus officinalis (garden asparagus)
Class
Genetic Information Processing; Transcription
Pathway map
aof03020  RNA polymerase
aof03020

Other DBs
GO: 0000428
Organism
Asparagus officinalis (garden asparagus) [GN:aof]
Gene
CCL56_pgp079  rpoB; RNA polymerase beta subunit [KO:K03043] [EC:2.7.7.6]
CCL56_pgp081  rpoC2; RNA polymerase beta' subunit [KO:K03046] [EC:2.7.7.6]
CCL56_pgp080  rpoC1; RNA polymerase beta [KO:K03046] [EC:2.7.7.6]
CCL56_pgp038  RNA polymerase alpha subunit [KO:K03040] [EC:2.7.7.6]
109839540  DNA-directed RNA polymerase II subunit RPB2 [KO:K03010] [EC:2.7.7.6]
109827408  DNA-directed RNA polymerase II subunit 1 [KO:K03006] [EC:2.7.7.6]
109841114  DNA-directed RNA polymerases II, IV and V subunit 3-like [KO:K03011]
109830164  DNA-directed RNA polymerases II, IV and V subunit 11-like [KO:K03008]
109834585  DNA-directed RNA polymerases II, IV and V subunit 11-like [KO:K03008]
109819980  DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [KO:K03012]
109837638  DNA-directed RNA polymerase II subunit 4 [KO:K03012]
109835422  DNA-directed RNA polymerase II subunit RPB7-like [KO:K03015]
109850380  DNA-directed RNA polymerase II subunit RPB7 [KO:K03015]
109820641  DNA-directed RNA polymerases II, IV and V subunit 9B-like isoform X1 [KO:K03017]
109850844  DNA-directed RNA polymerases II, IV and V subunit 9A [KO:K03017]
109851258  DNA-directed RNA polymerase III subunit 1 [KO:K03018] [EC:2.7.7.6]
109824424  DNA-directed RNA polymerases I and III subunit RPAC2 isoform X1 [KO:K03020]
109825289  DNA-directed RNA polymerases I and III subunit RPAC1 [KO:K03027]
109839981  DNA-directed RNA polymerase III subunit RPC3 isoform X1 [KO:K03023]
109830004  uncharacterized protein LOC109830004 [KO:K03026]
109822498  DNA-directed RNA polymerase III subunit RPC4-like isoform X1 [KO:K03026]
109833726  DNA-directed RNA polymerase III subunit RPC5 isoform X1 [KO:K14721]
109841117  uncharacterized protein LOC109841117 [KO:K14721]
109845884  DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [KO:K14721]
109824507  DNA-directed RNA polymerase III subunit RPC6 [KO:K03025]
109820890  glutamic acid-rich protein-like [KO:K03024]
109827813  DNA-directed RNA polymerase III subunit RPC8-like isoform X1 [KO:K03022]
109848655  DNA-directed RNA polymerase III subunit RPC8-like [KO:K03022]
109835381  DNA-directed RNA polymerase III subunit RPC9-like [KO:K25304]
109850520  DNA-directed RNA polymerase III subunit RPC10-like isoform X1 [KO:K03019]
109839621  DNA-directed RNA polymerase I subunit 2 isoform X1 [KO:K03002] [EC:2.7.7.6]
109840941  LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 1 [KO:K02999] [EC:2.7.7.6]
109850332  DNA-directed RNA polymerase I subunit RPA12-like [KO:K03000]
109827522  dr1-associated corepressor homolog [KO:K03004]
109833663  DNA-directed RNA polymerase I subunit rpa49 [KO:K03005]
109829039  DNA-directed RNA polymerase V subunit 5A-like [KO:K03013]
109830532  DNA-directed RNA polymerases II and IV subunit 5A-like [KO:K03013]
109831692  DNA-directed RNA polymerases II and IV subunit 5A [KO:K03013]
109825382  DNA-directed RNA polymerases II, IV and V subunit 6A-like [KO:K03014]
109832463  DNA-directed RNA polymerases II and V subunit 8A-like [KO:K03016]
109822285  DNA-directed RNA polymerases II, IV and V subunit 12 [KO:K03009]
109824707  DNA-directed RNA polymerases I, II, and III subunit RPABC5-like [KO:K03007]
109830304  DNA-directed RNA polymerases I, II, and III subunit RPABC5 [KO:K03007]
109838092  DNA-directed RNA polymerase IV subunit 1 [KO:K16250] [EC:2.7.7.6]
109844503  DNA-directed RNA polymerase V subunit 1 [KO:K16251] [EC:2.7.7.6]
109834490  DNA-directed RNA polymerase V subunit 7 [KO:K16253]
Reference
PMID:10499798
  Authors
Zhang G, Campbell EA, Minakhin L, Richter C, Severinov K, Darst SA.
  Title
Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.
  Journal
Cell 98:811-824 (1999)
DOI:10.1016/S0092-8674(00)81515-9
Reference
PMID:10784442
  Authors
Cramer P, Bushnell DA, Fu J, Gnatt AL, Maier-Davis B, Thompson NE, Burgess RR, Edwards AM, David PR, Kornberg RD.
  Title
Architecture of RNA polymerase II and implications for the transcription mechanism.
  Journal
Science 288:640-649 (2000)
DOI:10.1126/science.288.5466.640
Reference
PMID:19880312
  Authors
Hirata A, Murakami KS
  Title
Archaeal RNA polymerase.
  Journal
Curr Opin Struct Biol 19:724-31 (2009)
DOI:10.1016/j.sbi.2009.10.006
Reference
PMID:18573085
  Authors
Cramer P, Armache KJ, Baumli S, Benkert S, Brueckner F, Buchen C, Damsma GE, Dengl S, Geiger SR, Jasiak AJ, Jawhari A, Jennebach S, Kamenski T, Kettenberger H, Kuhn CD, Lehmann E, Leike K, Sydow JF, Vannini A
  Title
Structure of eukaryotic RNA polymerases.
  Journal
Annu Rev Biophys 37:337-52 (2008)
DOI:10.1146/annurev.biophys.37.032807.130008
Reference
PMID:31835031
  Authors
Hillen HS, Bartuli J, Grimm C, Dienemann C, Bedenk K, Szalay AA, Fischer U, Cramer P
  Title
Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes.
  Journal
Cell 179:1525-1536.e12 (2019)
DOI:10.1016/j.cell.2019.11.023
KO pathway
ko03020   
LinkDB

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