KEGG   PATHWAY: lcat04146
Entry
lcat04146                   Pathway                                
Name
Peroxisome - Lemur catta (Ring-tailed lemur)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
lcat04146  Peroxisome
lcat04146

Other DBs
GO: 0005777
Organism
Lemur catta (Ring-tailed lemur) [GN:lcat]
Gene
123620157  [KO:K11147] [EC:1.1.-.-]
123620253  PIPOX; peroxisomal sarcosine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
123620296  NOS2; nitric oxide synthase, inducible [KO:K13241] [EC:1.14.13.39]
123620342  PEX12; peroxisome assembly protein 12 isoform X1 [KO:K13345]
123622049  HAO1; hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
123622139  ACOX3; peroxisomal acyl-coenzyme A oxidase 3 isoform X1 [KO:K00232] [EC:1.3.3.6]
123622172  ACOT8; acyl-coenzyme A thioesterase 8 isoform X1 [KO:K11992] [EC:3.1.2.27]
123622431  PXMP4; peroxisomal membrane protein 4 isoform X1 [KO:K13350]
123622525  SLC27A2; very long-chain acyl-CoA synthetase [KO:K08746] [EC:6.2.1.- 6.2.1.3]
123623526  ACOX2; LOW QUALITY PROTEIN: peroxisomal acyl-coenzyme A oxidase 2 [KO:K10214] [EC:1.17.99.3]
123624133  NUDT19; acyl-coenzyme A diphosphatase NUDT19 [KO:K13355] [EC:3.6.1.77]
123624363  ECH1; LOW QUALITY PROTEIN: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
123625029  MLYCD; malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
123625253  NUDT7; peroxisomal coenzyme A diphosphatase NUDT7 [KO:K17879] [EC:3.6.1.77]
123625254  PHYH; phytanoyl-CoA dioxygenase, peroxisomal isoform X1 [KO:K00477] [EC:1.14.11.18]
123625890  MVK; mevalonate kinase isoform X1 [KO:K00869] [EC:2.7.1.36]
123625902  DAO; D-amino-acid oxidase isoform X1 [KO:K00273] [EC:1.4.3.3]
123626651  EPHX2; bifunctional epoxide hydrolase 2 isoform X1 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
123627146  ACAA1; 3-ketoacyl-CoA thiolase, peroxisomal isoform X1 [KO:K07513] [EC:2.3.1.16]
123627600  GNPAT; dihydroxyacetone phosphate acyltransferase isoform X1 [KO:K00649] [EC:2.3.1.42]
123628458  ABCD1; ATP-binding cassette sub-family D member 1 isoform X1 [KO:K05675] [EC:7.6.2.4]
123628571  HACL1; 2-hydroxyacyl-CoA lyase 1 isoform X1 [KO:K12261] [EC:4.1.2.63]
123628707  ACSL4; long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
123630292  PEX5L; PEX5-related protein isoform X1 [KO:K13342]
123630345  EHHADH; peroxisomal bifunctional enzyme isoform X1 [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
123630679  SOD1; superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
123631387  DECR2; peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] isoform X1 [KO:K13237] [EC:1.3.1.124]
123631891  PEX6; peroxisome biogenesis factor 6 [KO:K13339]
123632109  HMGCLL1; 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1 [KO:K01640] [EC:4.1.3.4]
123632409  MPV17L; mpv17-like protein isoform X1 [KO:K13349]
123633160  DDO; D-aspartate oxidase isoform X1 [KO:K00272] [EC:1.4.3.1]
123633304  PEX7; peroxisomal biogenesis factor 7 [KO:K13341]
123633329  PEX3; peroxisomal biogenesis factor 3 isoform X1 [KO:K13336]
123633424  SOD2; superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
123633880  PEX11B; peroxisomal membrane protein 11B isoform X1 [KO:K13352]
123634035  PMVK; phosphomevalonate kinase [KO:K13273] [EC:2.7.4.2]
123634203  PRDX1; peroxiredoxin-1 [KO:K13279] [EC:1.11.1.24]
123634418  HMGCL; hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [KO:K01640] [EC:4.1.3.4]
123634488  PEX14; peroxisomal membrane protein PEX14 isoform X1 [KO:K13343]
123635117  HAO2; hydroxyacid oxidase 2 [KO:K11517] [EC:1.1.3.15]
123635190  PEX19; peroxisomal biogenesis factor 19 isoform X1 [KO:K13337]
123635244  PEX11G; peroxisomal membrane protein 11C [KO:K13353]
123635342  [KO:K13344]
123635379  ABCD3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
123635639  SCP2; sterol carrier protein 2 [KO:K08764] [EC:2.3.1.176]
123635991  PEX10; peroxisome biogenesis factor 10 isoform X1 [KO:K13346]
123636726  MPV17; protein Mpv17 [KO:K13348]
123636770  XDH; xanthine dehydrogenase/oxidase isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
123636944  PEX13; peroxisome biogenesis factor 13 [KO:K13344]
123637743  ACSL6; long-chain-fatty-acid--CoA ligase 6 [KO:K01897] [EC:6.2.1.3]
123638190  ECI2; enoyl-CoA delta isomerase 2 isoform X1 [KO:K13239] [EC:5.3.3.8]
123638641  ACSL1; long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
123639736  MPV17L2; mpv17-like protein 2 isoform X1 [KO:K13348]
123639856  ABCD2; ATP-binding cassette sub-family D member 2 [KO:K05676] [EC:7.6.2.4]
123639890  FAR2; fatty acyl-CoA reductase 2 isoform X1 [KO:K13356] [EC:1.2.1.84]
123640077  PEX5; peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
123640172  PEX26; LOW QUALITY PROTEIN: peroxisome assembly protein 26 [KO:K13340]
123640323  SLC25A17; peroxisomal membrane protein PMP34 [KO:K13354]
123641423  PRDX5; peroxiredoxin-5, mitochondrial isoform X1 [KO:K11187] [EC:1.11.1.24]
123642464  FAR1; fatty acyl-CoA reductase 1 isoform X1 [KO:K13356] [EC:1.2.1.84]
123642582  CAT; catalase [KO:K03781] [EC:1.11.1.6]
123642638  PEX16; peroxisomal biogenesis factor 16 isoform X1 [KO:K13335]
123643624  PECR; peroxisomal trans-2-enoyl-CoA reductase [KO:K07753] [EC:1.3.1.38]
123643695  AGPS; alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X1 [KO:K00803] [EC:2.5.1.26]
123643951  AGXT; serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
123644061  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
123644153  ACSL3; fatty acid CoA ligase Acsl3 [KO:K01897] [EC:6.2.1.3]
123644619  PEX2; peroxisome biogenesis factor 2 [KO:K06664]
123645128  IDH2; isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
123645141  PEX11A; peroxisomal membrane protein 11A isoform X1 [KO:K13351]
123645821  BAAT; bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
123646374  CRAT; carnitine O-acetyltransferase isoform X1 [KO:K00624] [EC:2.3.1.7]
123646753  ABCD4; lysosomal cobalamin transporter ABCD4 isoform X1 [KO:K05678] [EC:7.6.2.8]
123647168  PEX1; peroxisome biogenesis factor 1 isoform X1 [KO:K13338]
123647325  CROT; peroxisomal carnitine O-octanoyltransferase isoform X1 [KO:K05940] [EC:2.3.1.137]
123647586  GSTK1; glutathione S-transferase kappa 1 isoform X1 [KO:K13299] [EC:2.5.1.18]
123648086  AMACR; alpha-methylacyl-CoA racemase isoform X1 [KO:K01796] [EC:5.1.99.4]
123648404  HSD17B4; peroxisomal multifunctional enzyme type 2 isoform X1 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
123648663  NUDT12; NAD-capped RNA hydrolase NUDT12 [KO:K03426] [EC:3.6.1.22]
123649868  ACSL5; long-chain-fatty-acid--CoA ligase 5 isoform X1 [KO:K01897] [EC:6.2.1.3]
123650190  PAOX; peroxisomal N(1)-acetyl-spermine/spermidine oxidase [KO:K00308] [EC:1.5.3.13]
123650362  NUDT13; NAD(P)H pyrophosphatase NUDT13, mitochondrial isoform X1 [KO:K03426] [EC:3.6.1.22]
123650816  ACOX1; peroxisomal acyl-coenzyme A oxidase 1 isoform X1 [KO:K00232] [EC:1.3.3.6]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
lcat00071  Fatty acid degradation
lcat00120  Primary bile acid biosynthesis
lcat00230  Purine metabolism
lcat00564  Glycerophospholipid metabolism
lcat00565  Ether lipid metabolism
lcat00830  Retinol metabolism
lcat00900  Terpenoid backbone biosynthesis
lcat03320  PPAR signaling pathway
KO pathway
ko04146   

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