KEGG   PATHWAY: myd04350
Entry
myd04350                    Pathway                                
Name
TGF-beta signaling pathway - Myotis davidii (David's myotis)
Description
The transforming growth factor-beta (TGF-beta) family members, which include TGF-betas, activins and bone morphogenetic proteins (BMPs), are structurally related secreted cytokines found in species ranging from worms and insects to mammals. A wide spectrum of cellular functions such as proliferation, apoptosis, differentiation and migration are regulated by TGF-beta family members. TGF-beta family member binds to the Type II receptor and recruits Type I, whereby Type II receptor phosphorylates and activates Type I. The Type I receptor, in turn, phosphorylates receptor-activated Smads ( R-Smads: Smad1, Smad2, Smad3, Smad5, and Smad8). Once phosphorylated, R-Smads associate with the co-mediator Smad, Smad4, and the heteromeric complex then translocates into the nucleus. In the nucleus, Smad complexes activate specific genes through cooperative interactions with other DNA-binding and coactivator (or co-repressor) proteins.
Class
Environmental Information Processing; Signal transduction
Pathway map
myd04350  TGF-beta signaling pathway
myd04350

Other DBs
GO: 0007179
Organism
Myotis davidii (David's myotis) [GN:myd]
Gene
102752316  CHRD; chordin [KO:K04657]
102767570  NOG; noggin [KO:K04658]
102770781  NBL1; neuroblastoma 1, DAN family BMP antagonist [KO:K19558]
102764715  GREM1; gremlin 1, DAN family BMP antagonist [KO:K23318]
102758170  THBS1; thrombospondin 1 [KO:K16857]
102753206  DCN; decorin [KO:K04660]
102765717  FMOD; fibromodulin [KO:K08121]
102760348  FST; follistatin [KO:K04661]
102768711  BMP2; bone morphogenetic protein 2 [KO:K21283]
102769625  BMP4; bone morphogenetic protein 4 [KO:K04662]
102770741  bone morphogenetic protein 4 [KO:K04662]
102757980  BMP6; bone morphogenetic protein 6 [KO:K16620]
102767228  INHBB; inhibin beta B subunit [KO:K22687]
102773044  TF; serotransferrin [KO:K14736]
102773334  inhibitor of carbonic anhydrase [KO:K14736]
102767564  BMP5; bone morphogenetic protein 5 [KO:K04663]
102759279  BMP7; bone morphogenetic protein 7 [KO:K16621]
102764179  BMP8B; bone morphogenetic protein 8B [KO:K16622]
102757334  GDF5; growth differentiation factor 5 [KO:K04664]
102774208  IFNG; interferon gamma [KO:K04687]
102758774  TNF; tumor necrosis factor [KO:K03156]
102753839  thrombospondin type-1 domain-containing protein 4 [KO:K23377]
102767925  FBN1; fibrillin 1 [KO:K06825]
102771353  LTBP1; latent transforming growth factor beta binding protein 1 [KO:K19559]
102752983  TGFB1; transforming growth factor beta 1 [KO:K13375]
102755920  TGFB2; transforming growth factor beta 2 [KO:K13376]
102767291  TGFB3; transforming growth factor beta 3 [KO:K13377]
102774060  INHBA; inhibin beta A subunit [KO:K04667]
102765085  INHBC; inhibin beta C subunit [KO:K22688]
102764798  INHBE; inhibin beta E subunit [KO:K22689]
102765593  NODAL; nodal growth differentiation factor [KO:K04666]
102769420  BMPR1A; bone morphogenetic protein receptor type 1A [KO:K04673] [EC:2.7.11.30]
102764015  BMPR1B; bone morphogenetic protein receptor type 1B [KO:K13578] [EC:2.7.11.30]
102767973  ACVR1; activin A receptor type 1 [KO:K04675] [EC:2.7.11.30]
102769364  BMPR2; bone morphogenetic protein receptor type 2 [KO:K04671] [EC:2.7.11.30]
102768276  ACVR2A; activin A receptor type 2A [KO:K04670] [EC:2.7.11.30]
102764428  NEO1; neogenin 1 [KO:K06766]
102755845  TFR2; transferrin receptor 2 [KO:K23910]
102755413  TFRC; transferrin receptor [KO:K06503]
102774913  RGMB; repulsive guidance molecule family member b [KO:K06847]
102774743  AMHR2; anti-Mullerian hormone receptor type 2 [KO:K04672] [EC:2.7.11.30]
102765185  TGFBR1; transforming growth factor beta receptor 1 [KO:K04674] [EC:2.7.11.30]
102767756  TGFBR2; transforming growth factor beta receptor 2 [KO:K04388] [EC:2.7.11.30]
102759126  EMP3; epithelial membrane protein 3 [KO:K26257]
102757522  LRRC32; leucine rich repeat containing 32 [KO:K26316]
102752706  NRROS; negative regulator of reactive oxygen species [KO:K26317]
102765939  ACVR1B; activin A receptor type 1B [KO:K13567] [EC:2.7.11.30]
102759199  ACVR2B; activin A receptor type 2B [KO:K13596] [EC:2.7.11.30]
102767691  ACVR1C; activin A receptor type 1C [KO:K13568] [EC:2.7.11.30]
102757631  IGSF1; immunoglobulin superfamily member 1 [KO:K26168]
102758015  BAMBI; BMP and activin membrane bound inhibitor [KO:K10162]
102762872  SMAD1; SMAD family member 1 [KO:K04676]
102775179  SMAD5; SMAD family member 5 [KO:K16790]
102766670  mothers against decapentaplegic homolog 9-like [KO:K16791]
102758819  SMAD2; SMAD family member 2 [KO:K04500]
102769241  SMAD3; SMAD family member 3 [KO:K23605]
102752949  SMAD4; SMAD family member 4 [KO:K04501]
102763712  SMAD6; SMAD family member 6 [KO:K04677]
102759949  SMAD7; SMAD family member 7 [KO:K19631]
102766257  SMURF1; SMAD specific E3 ubiquitin protein ligase 1 [KO:K04678] [EC:2.3.2.26]
102770155  SMURF2; SMAD specific E3 ubiquitin protein ligase 2 [KO:K04678] [EC:2.3.2.26]
102761697  ZFYVE9; zinc finger FYVE-type containing 9 [KO:K04679]
102753646  ZFYVE16; zinc finger FYVE-type containing 16 [KO:K04679]
102760790  RBX1; ring-box 1 [KO:K03868] [EC:2.3.2.32]
102771406  CUL1; cullin 1 [KO:K03347]
102756513  SKP1; S-phase kinase associated protein 1 [KO:K03094]
102769037  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
102775211  MAPK3; mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
102751353  RHOA; ras homolog family member A [KO:K04513]
102757900  ROCK1; Rho associated coiled-coil containing protein kinase 1 [KO:K04514] [EC:2.7.11.1]
102762854  PPP2R1A; protein phosphatase 2 scaffold subunit Aalpha [KO:K03456]
102758648  PPP2R1B; protein phosphatase 2 scaffold subunit Abeta [KO:K03456]
102762679  PPP2CA; protein phosphatase 2 catalytic subunit alpha [KO:K04382] [EC:3.1.3.16]
102771922  PPP2CB; protein phosphatase 2 catalytic subunit beta [KO:K04382] [EC:3.1.3.16]
102763828  RPS6KB2; ribosomal protein S6 kinase B2 [KO:K04688] [EC:2.7.11.1]
102775361  RPS6KB1; ribosomal protein S6 kinase B1 [KO:K04688] [EC:2.7.11.1]
102775050  HAMP; hepcidin antimicrobial peptide [KO:K23106]
102762179  ID1; inhibitor of DNA binding 1, HLH protein [KO:K04680]
102759200  ID2; inhibitor of DNA binding 2, HLH protein [KO:K17693]
102774540  ID3; inhibitor of DNA binding 3, HLH protein [KO:K17694]
102755658  RBL1; RB transcriptional corepressor like 1 [KO:K04681]
102763143  E2F5; E2F transcription factor 5 [KO:K04682]
102755290  E2F4; E2F transcription factor 4 [KO:K04682]
102760469  TFDP1; transcription factor Dp-1 [KO:K04683]
102773412  CREBBP; CREB binding protein [KO:K04498] [EC:2.3.1.48]
102760017  EP300; E1A binding protein p300 [KO:K04498] [EC:2.3.1.48]
102753263  transcription factor Sp1-like [KO:K04684]
102752526  SP1; Sp1 transcription factor [KO:K04684]
102771727  SKIL; SKI like proto-oncogene [KO:K18499]
102774505  SKI; SKI proto-oncogene [KO:K26503]
102768870  SIN3A; SIN3 transcription regulator family member A [KO:K11644]
102764610  HDAC1; histone deacetylase 1 [KO:K06067] [EC:3.5.1.98]
102773716  HDAC2; histone deacetylase 2 [KO:K06067] [EC:3.5.1.98]
102765108  NCOR1; nuclear receptor corepressor 1 [KO:K04650]
102775525  TGIF1; TGFB induced factor homeobox 1 [KO:K19383]
102751992  TGIF2; TGFB induced factor homeobox 2 [KO:K19553]
102758544  MYC; v-myc avian myelocytomatosis viral oncogene homolog [KO:K04377]
102766057  cyclin-dependent kinase 4 inhibitor B-like [KO:K04685]
102765197  cyclin-dependent kinase 4 inhibitor B [KO:K04685]
102758873  PITX2; paired like homeodomain 2 [KO:K04686]
Compound
C14819  Fe3+
Reference
  Authors
Shi Y, Massague J.
  Title
Mechanisms of TGF-beta signaling from cell membrane to the nucleus.
  Journal
Cell 113:685-700 (2003)
DOI:10.1016/S0092-8674(03)00432-X
Reference
  Authors
Derynck R, Zhang YE.
  Title
Smad-dependent and Smad-independent pathways in TGF-beta family signalling.
  Journal
Nature 425:577-84 (2003)
DOI:10.1038/nature02006
Reference
  Authors
Massague J.
  Title
How cells read TGF-beta signals.
  Journal
Nat Rev Mol Cell Biol 1:169-78 (2000)
DOI:10.1038/35043051
Reference
  Authors
Siegel PM, Massague J.
  Title
Cytostatic and apoptotic actions of TGF-beta in homeostasis and cancer.
  Journal
Nat Rev Cancer 3:807-21 (2003)
DOI:10.1038/nrc1208
Reference
  Authors
Shimasaki S, Moore RK, Otsuka F, Erickson GF.
  Title
The bone morphogenetic protein system in mammalian reproduction.
  Journal
Endocr Rev 25:72-101 (2004)
DOI:10.1210/er.2003-0007
Reference
  Authors
De Robertis EM, Larrain J, Oelgeschlager M, Wessely O.
  Title
The establishment of Spemann's organizer and patterning of the vertebrate embryo.
  Journal
Nat Rev Genet 1:171-81 (2000)
DOI:10.1038/35042039
Reference
  Authors
Gumienny TL, Padgett RW.
  Title
The other side of TGF-beta superfamily signal regulation: thinking outside the cell.
  Journal
Trends Endocrinol Metab 13:295-9 (2002)
DOI:10.1016/S1043-2760(02)00615-X
Reference
  Authors
Hamada H, Meno C, Watanabe D, Saijoh Y.
  Title
Establishment of vertebrate left-right asymmetry.
  Journal
Nat Rev Genet 3:103-13 (2002)
DOI:10.1038/nrg732
Reference
  Authors
Chang H, Brown CW, Matzuk MM.
  Title
Genetic analysis of the mammalian transforming growth factor-beta superfamily.
  Journal
Endocr Rev 23:787-823 (2002)
DOI:10.1210/er.2002-0003
Reference
  Authors
Morita K, Chow KL, Ueno N.
  Title
Regulation of body length and male tail ray pattern formation of Caenorhabditis elegans by a member of TGF-beta family.
  Journal
Development 126:1337-47 (1999)
Reference
PMID:9847239
  Authors
Krishna S, Maduzia LL, Padgett RW.
  Title
Specificity of TGFbeta signaling is conferred by distinct type I receptors and their associated SMAD proteins in Caenorhabditis elegans.
  Journal
Development 126:251-60 (1999)
Reference
  Authors
Chen Y, Mironova E, Whitaker LL, Edwards L, Yost HJ, Ramsdell AF.
  Title
ALK4 functions as a receptor for multiple TGF beta-related ligands to regulate left-right axis determination and mesoderm induction in Xenopus.
  Journal
Dev Biol 268:280-94 (2004)
DOI:10.1016/j.ydbio.2003.12.035
Reference
  Authors
Onichtchouk D, Chen YG, Dosch R, Gawantka V, Delius H, Massague J, Niehrs C
  Title
Silencing of TGF-beta signalling by the pseudoreceptor BAMBI.
  Journal
Nature 401:480-5 (1999)
DOI:10.1038/46794
Reference
  Authors
Yan X, Lin Z, Chen F, Zhao X, Chen H, Ning Y, Chen YG
  Title
Human BAMBI cooperates with Smad7 to inhibit transforming growth factor-beta signaling.
  Journal
J Biol Chem 284:30097-104 (2009)
DOI:10.1074/jbc.M109.049304
Reference
PMID:8093006
  Authors
Hildebrand A, Romaris M, Rasmussen LM, Heinegard D, Twardzik DR, Border WA, Ruoslahti E
  Title
Interaction of the small interstitial proteoglycans biglycan, decorin and fibromodulin with transforming growth factor beta.
  Journal
Biochem J 302 ( Pt 2):527-34 (1994)
DOI:10.1042/bj3020527
Reference
  Authors
Soo C, Hu FY, Zhang X, Wang Y, Beanes SR, Lorenz HP, Hedrick MH, Mackool RJ, Plaas A, Kim SJ, Longaker MT, Freymiller E, Ting K
  Title
Differential expression of fibromodulin, a transforming growth factor-beta modulator, in fetal skin development and scarless repair.
  Journal
Am J Pathol 157:423-33 (2000)
DOI:10.1016/s0002-9440(10)64555-5
Reference
  Authors
Anderson GJ, Frazer DM
  Title
Iron metabolism meets signal transduction.
  Journal
Nat Genet 38:503-4 (2006)
DOI:10.1038/ng0506-503
Reference
  Authors
Canali S, Core AB, Zumbrennen-Bullough KB, Merkulova M, Wang CY, Schneyer AL, Pietrangelo A, Babitt JL
  Title
Activin B Induces Noncanonical SMAD1/5/8 Signaling via BMP Type I Receptors in Hepatocytes: Evidence for a Role in Hepcidin Induction by Inflammation in Male Mice.
  Journal
Endocrinology 157:1146-62 (2016)
DOI:10.1210/en.2015-1747
Reference
  Authors
Ganz T, Nemeth E
  Title
Iron homeostasis in host defence and inflammation.
  Journal
Nat Rev Immunol 15:500-10 (2015)
DOI:10.1038/nri3863
Reference
  Authors
Babitt JL, Zhang Y, Samad TA, Xia Y, Tang J, Campagna JA, Schneyer AL, Woolf CJ, Lin HY
  Title
Repulsive guidance molecule (RGMa), a DRAGON homologue, is a bone morphogenetic protein co-receptor.
  Journal
J Biol Chem 280:29820-7 (2005)
DOI:10.1074/jbc.M503511200
Reference
  Authors
Samad TA, Rebbapragada A, Bell E, Zhang Y, Sidis Y, Jeong SJ, Campagna JA, Perusini S, Fabrizio DA, Schneyer AL, Lin HY, Brivanlou AH, Attisano L, Woolf CJ
  Title
DRAGON, a bone morphogenetic protein co-receptor.
  Journal
J Biol Chem 280:14122-9 (2005)
DOI:10.1074/jbc.M410034200
Reference
  Authors
Vogt AS, Arsiwala T, Mohsen M, Vogel M, Manolova V, Bachmann MF
  Title
On Iron Metabolism and Its Regulation.
  Journal
Int J Mol Sci 22:ijms22094591 (2021)
DOI:10.3390/ijms22094591
Reference
  Authors
Ikushima H, Miyazono K
  Title
TGFbeta signalling: a complex web in cancer progression.
  Journal
Nat Rev Cancer 10:415-24 (2010)
DOI:10.1038/nrc2853
Related
pathway
myd04010  MAPK signaling pathway
myd04110  Cell cycle
myd04120  Ubiquitin mediated proteolysis
myd04210  Apoptosis
KO pathway
ko04350   
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