KEGG   PATHWAY: llv03250
Entry
llv03250                    Pathway                                
Name
Viral life cycle - HIV-1 - Lutra lutra (Eurasian river otter)
Class
Genetic Information Processing; Information processing in viruses
Pathway map
llv03250  Viral life cycle - HIV-1
llv03250

Organism
Lutra lutra (Eurasian river otter) [GN:llv]
Gene
125081230  C-C chemokine receptor type 5 isoform X1 [KO:K04180]
125096040  C-X-C chemokine receptor type 4 [KO:K04189]
125107477  T-cell surface glycoprotein CD4-like isoform X1 [KO:K06454]
125100716  microtubule-associated protein 1B isoform X1 [KO:K10429]
125103833  LOW QUALITY PROTEIN: microtubule-associated protein 1A-like [KO:K10429]
125082455  microtubule-associated protein 1S [KO:K10429]
125079647  fasciculation and elongation protein zeta-1 isoform X1 [KO:K25663]
125083329  protein bicaudal D homolog 2 isoform X1 [KO:K18739]
125106606  protein bicaudal D homolog 1 isoform X1 [KO:K18739]
125078130  tripartite motif-containing protein 34-like [KO:K10648] [EC:2.3.2.27]
125107011  DNA dC->dU-editing enzyme APOBEC-3-like [KO:K18750] [EC:3.5.4.-]
125107494  DNA dC->dU-editing enzyme APOBEC-3G-like isoform X1 [KO:K18750] [EC:3.5.4.-]
125108644  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
125087757  PC4 and SFRS1-interacting protein-like [KO:K25057]
125083105  PC4 and SFRS1-interacting protein isoform X1 [KO:K25057]
125085092  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
125081890  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 [KO:K11648]
125092293  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
125110267  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
125087572  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
125097237  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
125081221  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
125093361  LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 6-like [KO:K14398]
125080173  cleavage and polyadenylation specificity factor subunit 7 isoform X1 [KO:K14398]
125106351  cleavage and polyadenylation specificity factor subunit 6 isoform X1 [KO:K14398]
125080589  transportin-3 isoform X1 [KO:K15436]
125093949  interferon-induced GTP-binding protein Mx2-like [KO:K14754]
125093997  interferon-induced GTP-binding protein Mx1 [KO:K14754]
125108400  E3 SUMO-protein ligase RanBP2 isoform X1 [KO:K12172] [EC:2.3.2.-]
125102436  nuclear pore complex protein Nup153-like isoform X1 [KO:K14296]
125091150  CREB-binding protein isoform X1 [KO:K04498] [EC:2.3.1.48]
125106189  histone acetyltransferase p300 [KO:K04498] [EC:2.3.1.48]
125087084  histone acetyltransferase KAT2A isoform X1 [KO:K06062] [EC:2.3.1.48]
125104906  histone acetyltransferase KAT2B isoform X1 [KO:K06062] [EC:2.3.1.48]
125083358  cyclin-dependent kinase 9 [KO:K02211] [EC:2.7.11.22 2.7.11.23]
125095941  cyclin-T2 isoform X1 [KO:K15188]
125106492  cyclin-T1 isoform X1 [KO:K15188]
125099674  AF4/FMR2 family member 4 [KO:K15185]
125099848  RNA polymerase II elongation factor ELL2 [KO:K15183]
125092018  LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL2-like [KO:K15183]
125103881  RNA polymerase II elongation factor ELL3-like [KO:K15183]
125082026  RNA polymerase II elongation factor ELL [KO:K15183]
125083667  protein AF-9 [KO:K15187]
125088189  protein ENL isoform X1 [KO:K15187]
125093461  negative elongation factor A [KO:K15179]
125082866  negative elongation factor B [KO:K15180]
125108690  negative elongation factor D isoform X1 [KO:K15181]
125101530  negative elongation factor E [KO:K15182]
125087253  transcription elongation factor SPT4-A isoform X1 [KO:K15171]
125088524  transcription elongation factor SPT5 [KO:K15172]
125108599  LOW QUALITY PROTEIN: exportin-1-like [KO:K14290]
125082448  GTP-binding nuclear protein Ran [KO:K07936]
125103772  furin isoform X1 [KO:K01349] [EC:3.4.21.75]
125108715  serine incorporator 3 [KO:K25661]
125100221  serine incorporator 5 [KO:K25655]
125082578  bone marrow stromal antigen 2-like [KO:K06731]
125087905  hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182]
125110308  tumor susceptibility gene 101 protein isoform X1 [KO:K12183]
125087612  charged multivesicular body protein 6 isoform X1 [KO:K12195]
125109028  charged multivesicular body protein 4b [KO:K12194]
125104327  charged multivesicular body protein 4a isoform X1 [KO:K12194]
125106806  programmed cell death 6-interacting protein isoform X1 [KO:K12200]
125092278  vacuolar protein sorting-associated protein 4B [KO:K12196]
125081676  vacuolar protein sorting-associated protein 4B [KO:K12196]
125089363  vacuolar protein sorting-associated protein 4A isoform X1 [KO:K12196]
Reference
PMID:27357278
  Authors
Li G, De Clercq E
  Title
HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  Journal
Microbiol Mol Biol Rev 80:679-731 (2016)
DOI:10.1128/MMBR.00065-15
Reference
PMID:21284899
  Authors
Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  Title
Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  Journal
J Transl Med 9 Suppl 1:S1 (2011)
DOI:10.1186/1479-5876-9-S1-S1
Reference
PMID:31028522
  Authors
Novikova M, Zhang Y, Freed EO, Peng K
  Title
Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  Journal
Virol Sin 34:119-134 (2019)
DOI:10.1007/s12250-019-00095-3
Reference
PMID:30286189
  Authors
Rawle DJ, Harrich D
  Title
Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  Journal
PLoS Pathog 14:e1007270 (2018)
DOI:10.1371/journal.ppat.1007270
Reference
PMID:25036886
  Authors
Le Sage V, Mouland AJ, Valiente-Echeverria F
  Title
Roles of HIV-1 capsid in viral replication and immune evasion.
  Journal
Virus Res 193:116-29 (2014)
DOI:10.1016/j.virusres.2014.07.010
Reference
PMID:32429351
  Authors
Murphy RE, Saad JS
  Title
The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  Journal
Viruses 12:E548 (2020)
DOI:10.3390/v12050548
Reference
PMID:21360054
  Authors
He N, Zhou Q
  Title
New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  Journal
J Neuroimmune Pharmacol 6:260-8 (2011)
DOI:10.1007/s11481-011-9267-6
Reference
PMID:19865606
  Authors
Pincetic A, Leis J
  Title
The Mechanism of Budding of Retroviruses From Cell Membranes.
  Journal
Adv Virol 2009:6239691-6239699 (2009)
DOI:10.1155/2009/623969
Reference
PMID:32858867
  Authors
Kleinpeter AB, Freed EO
  Title
HIV-1 Maturation: Lessons Learned from Inhibitors.
  Journal
Viruses 12:E940 (2020)
DOI:10.3390/v12090940
Related
pathway
llv03013  Nucleocytoplasmic transport
llv04144  Endocytosis
KO pathway
ko03250   
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