KEGG   PATHWAY: mpah04146
Entry
mpah04146                   Pathway                                
Name
Peroxisome - Mus pahari (shrew mouse)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
mpah04146  Peroxisome
mpah04146

Other DBs
GO: 0005777
Organism
Mus pahari (shrew mouse) [GN:mpah]
Gene
110318774  Pex16; peroxisomal biogenesis factor 16 [KO:K13335]
110338014  Pex3; peroxisomal biogenesis factor 3 isoform X1 [KO:K13336]
110321420  Pex19; peroxisomal biogenesis factor 19 isoform X1 [KO:K13337]
110319793  Abcd3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
110316148  Pex1; peroxisome biogenesis factor 1 isoform X1 [KO:K13338]
110335548  Pex6; peroxisome biogenesis factor 6 isoform X1 [KO:K13339]
110317137  Pex26; peroxisome assembly protein 26 isoform X1 [KO:K13340]
110338162  Pex7; peroxisomal biogenesis factor 7 isoform X1 [KO:K13341]
110321072  Pex5l; PEX5-related protein isoform X1 [KO:K13342]
110317165  Pex5; peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
110323164  Pex14; peroxisomal membrane protein PEX14 [KO:K13343]
110330504  Pex13; peroxisome biogenesis factor 13 [KO:K13344]
110331981  Pex12; peroxisome assembly protein 12 [KO:K13345]
110323884  Pex10; peroxisome biogenesis factor 10 [KO:K13346]
110320436  Pex2; peroxisome biogenesis factor 2 [KO:K06664]
110313092  Pxmp2; peroxisomal membrane protein 2 [KO:K13347]
110324813  Mpv17; protein Mpv17 isoform X1 [KO:K13348]
110336340  Mpv17l2; mpv17-like protein 2 [KO:K13348]
110330118  Mpv17l; mpv17-like protein [KO:K13349]
110319106  Pxmp4; peroxisomal membrane protein 4 isoform X1 [KO:K13350]
110333609  Pex11a; peroxisomal membrane protein 11A isoform X1 [KO:K13351]
110320531  Pex11b; peroxisomal membrane protein 11B isoform X1 [KO:K13352]
110336923  Pex11g; peroxisomal membrane protein 11C [KO:K13353]
110334777  Slc25a17; peroxisomal membrane protein PMP34 isoform X1 [KO:K13354]
110325771  Hacl1; 2-hydroxyacyl-CoA lyase 1 isoform X1 [KO:K12261] [EC:4.1.2.63]
110329090  Amacr; alpha-methylacyl-CoA racemase [KO:K01796] [EC:5.1.99.4]
110333915  Phyh; phytanoyl-CoA dioxygenase, peroxisomal isoform X1 [KO:K00477] [EC:1.14.11.18]
110331272  Acox1; peroxisomal acyl-coenzyme A oxidase 1 isoform X1 [KO:K00232] [EC:1.3.3.6]
110330653  Acox3; peroxisomal acyl-coenzyme A oxidase 3 [KO:K00232] [EC:1.3.3.6]
110325739  Acox2; peroxisomal acyl-coenzyme A oxidase 2 [KO:K10214] [EC:1.17.99.3]
110332881  Hsd17b4; peroxisomal multifunctional enzyme type 2 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
110323135  Scp2; LOW QUALITY PROTEIN: non-specific lipid-transfer protein [KO:K08764] [EC:2.3.1.176]
110323775  Baat; bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
110323900  bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
110330110  Ehhadh; peroxisomal bifunctional enzyme [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
110328451  3-ketoacyl-CoA thiolase A, peroxisomal-like [KO:K07513] [EC:2.3.1.16]
110327492  Acaa1; 3-ketoacyl-CoA thiolase, peroxisomal isoform X1 [KO:K07513] [EC:2.3.1.16]
110338200  Decr2; peroxisomal 2,4-dienoyl-CoA reductase [KO:K13237] [EC:1.3.1.124]
110330088  Ech1; delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
110313461  Abcd1; ATP-binding cassette sub-family D member 1 isoform X1 [KO:K05675] [EC:7.6.2.4]
110334803  Abcd2; ATP-binding cassette sub-family D member 2 [KO:K05676] [EC:7.6.2.4]
110324703  Abcd4; ATP-binding cassette sub-family D member 4 [KO:K05678] [EC:7.6.2.8]
110318720  Slc27a2; very long-chain acyl-CoA synthetase isoform X1 [KO:K08746] [EC:6.2.1.- 6.2.1.3]
110313469  Acsl4; long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
110321273  Acsl3; long-chain-fatty-acid--CoA ligase 3 [KO:K01897] [EC:6.2.1.3]
110332134  Acsl6; long-chain-fatty-acid--CoA ligase 6 isoform X1 [KO:K01897] [EC:6.2.1.3]
110317632  Acsl5; long-chain-fatty-acid--CoA ligase 5 isoform X1 [KO:K01897] [EC:6.2.1.3]
110336203  Acsl1; long-chain-fatty-acid--CoA ligase 1 [KO:K01897] [EC:6.2.1.3]
110322273  Pecr; peroxisomal trans-2-enoyl-CoA reductase isoform X1 [KO:K07753] [EC:1.3.1.38]
110333815  enoyl-CoA delta isomerase 2, mitochondrial isoform X1 [KO:K13239] [EC:5.3.3.8]
110333969  enoyl-CoA delta isomerase 3, peroxisomal isoform X1 [KO:K13239] [EC:5.3.3.8]
110337616  Nudt7; peroxisomal coenzyme A diphosphatase NUDT7 isoform X1 [KO:K17879] [EC:3.6.1.77]
110335826  Nudt12; peroxisomal NADH pyrophosphatase NUDT12 isoform X1 [KO:K03426] [EC:3.6.1.22]
110325823  Nudt13; nucleoside diphosphate-linked moiety X motif 13 isoform X1 [KO:K03426] [EC:3.6.1.22]
110331376  Nudt19; nucleoside diphosphate-linked moiety X motif 19 [KO:K13355] [EC:3.6.1.77]
110318159  Acot8; acyl-coenzyme A thioesterase 8 isoform X1 [KO:K11992] [EC:3.1.2.27]
110318136  Crat; carnitine O-acetyltransferase isoform X1 [KO:K00624] [EC:2.3.1.7]
110316407  Crot; peroxisomal carnitine O-octanoyltransferase [KO:K05940] [EC:2.3.1.137]
110337530  Mlycd; malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
110337185  Gnpat; dihydroxyacetone phosphate acyltransferase [KO:K00649] [EC:2.3.1.42]
110317757  Agps; alkyldihydroxyacetonephosphate synthase, peroxisomal [KO:K00803] [EC:2.5.1.26]
110316026  Far2; fatty acyl-CoA reductase 2 isoform X1 [KO:K13356] [EC:1.2.1.84]
110318487  Far1; fatty acyl-CoA reductase 1 isoform X1 [KO:K13356] [EC:1.2.1.84]
110312975  Mvk; mevalonate kinase isoform X1 [KO:K00869] [EC:2.7.1.36]
110320410  Pmvk; phosphomevalonate kinase isoform X1 [KO:K13273] [EC:2.7.4.2]
110322334  Agxt; serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
110312952  Dao; D-amino-acid oxidase isoform X1 [KO:K00273] [EC:1.4.3.3]
110326814  Ddo; D-aspartate oxidase isoform X1 [KO:K00272] [EC:1.4.3.1]
110322685  Idh1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
110316662  Idh2; isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
110325417  Paox; peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 [KO:K00308] [EC:1.5.3.13]
110332417  Pipox; peroxisomal sarcosine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
110323291  Hmgcl; hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [KO:K01640] [EC:4.1.3.4]
110327857  Hmgcll1; 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic [KO:K01640] [EC:4.1.3.4]
110320614  Hao2; hydroxyacid oxidase 2 [KO:K11517] [EC:1.1.3.15]
110318399  Hao1; hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
110319293  Cat; catalase [KO:K03781] [EC:1.11.1.6]
110319388  Prdx5; peroxiredoxin-5, mitochondrial [KO:K11187] [EC:1.11.1.24]
110329810  Sod1; superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
110338019  Sod2; superoxide dismutase [Mn], mitochondrial isoform X1 [KO:K04564] [EC:1.15.1.1]
110331408  Nos2; nitric oxide synthase, inducible [KO:K13241] [EC:1.14.13.39]
110322921  Prdx1; peroxiredoxin-1 [KO:K13279] [EC:1.11.1.24]
110325104  Ephx2; bifunctional epoxide hydrolase 2 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
110317036  Gstk1; glutathione S-transferase kappa 1 isoform X1 [KO:K13299] [EC:2.5.1.18]
110335495  Xdh; xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
110325487  dehydrogenase/reductase SDR family member 4 isoform X1 [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
mpah00071  Fatty acid degradation
mpah00120  Primary bile acid biosynthesis
mpah00230  Purine metabolism
mpah00564  Glycerophospholipid metabolism
mpah00565  Ether lipid metabolism
mpah00830  Retinol metabolism
mpah00900  Terpenoid backbone biosynthesis
mpah03320  PPAR signaling pathway
KO pathway
ko04146   
LinkDB

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