KEGG   PATHWAY: mthb00270
Entry
mthb00270                   Pathway                                
Name
Cysteine and methionine metabolism - Macaca thibetana thibetana (Pere David's macaque)
Description
Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].
Class
Metabolism; Amino acid metabolism
Pathway map
mthb00270  Cysteine and methionine metabolism
mthb00270

Module
mthb_M00034  Methionine salvage pathway [PATH:mthb00270]
mthb_M00035  Methionine degradation [PATH:mthb00270]
mthb_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:mthb00270]
Other DBs
GO: 0006534 0006555
Organism
Macaca thibetana thibetana (Pere David's macaque) [GN:mthb]
Gene
126962981  cystathionine gamma-lyase isoform X1 [KO:K01758] [EC:4.4.1.1]
126936990  kynurenine--oxoglutarate transaminase 1 isoform X1 [KO:K00816] [EC:2.6.1.7 4.4.1.13 2.6.1.64]
126963865  kynurenine--oxoglutarate transaminase 3 [KO:K00816] [EC:2.6.1.7 4.4.1.13 2.6.1.64]
126950623  cystathionine beta-synthase isoform X1 [KO:K01697] [EC:4.2.1.22]
126957590  betaine--homocysteine S-methyltransferase 1 [KO:K00544] [EC:2.1.1.5]
126957596  S-methylmethionine--homocysteine S-methyltransferase BHMT2 [KO:K00547] [EC:2.1.1.10]
126942723  methionine synthase isoform X1 [KO:K00548] [EC:2.1.1.13]
126962440  S-adenosylmethionine synthase [KO:K00789] [EC:2.5.1.6]
126955939  methionine adenosyltransferase 2 subunit beta isoform X1 [KO:K00789] [EC:2.5.1.6]
126957599  LOW QUALITY PROTEIN: methionine adenosyltransferase 2 subunit beta-like [KO:K00789] [EC:2.5.1.6]
126933406  S-adenosylmethionine synthase [KO:K00789] [EC:2.5.1.6]
126953601  S-adenosylmethionine decarboxylase proenzyme [KO:K01611] [EC:4.1.1.50]
126937419  spermidine synthase-like [KO:K00797] [EC:2.5.1.16]
126940541  spermidine synthase-like [KO:K00797] [EC:2.5.1.16]
126953167  spermidine synthase [KO:K00797] [EC:2.5.1.16]
126945251  spermine synthase [KO:K00802] [EC:2.5.1.22]
126937593  S-methyl-5'-thioadenosine phosphorylase isoform X1 [KO:K00772] [EC:2.4.2.28]
126940372  purine nucleoside phosphorylase LACC1 isoform X1 [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
126942692  methylthioribose-1-phosphate isomerase isoform X1 [KO:K08963] [EC:5.3.1.23]
126936310  methylthioribulose-1-phosphate dehydratase isoform X1 [KO:K08964] [EC:4.2.1.109]
126954561  enolase-phosphatase E1 isoform X1 [KO:K09880] [EC:3.1.3.77]
126963118  enolase-phosphatase E1-like [KO:K09880] [EC:3.1.3.77]
126950828  enolase-phosphatase E1-like [KO:K09880] [EC:3.1.3.77]
126933871  acireductone dioxygenase isoform X1 [KO:K08967] [EC:1.13.11.53 1.13.11.54]
126943735  tyrosine aminotransferase isoform X1 [KO:K00815] [EC:2.6.1.5]
126943105  L-amino-acid oxidase isoform X1 [KO:K03334] [EC:1.4.3.2]
126952406  glycine N-methyltransferase isoform X1 [KO:K00552] [EC:2.1.1.20]
126942461  DNA (cytosine-5)-methyltransferase 1 isoform X1 [KO:K00558] [EC:2.1.1.37]
126933647  DNA (cytosine-5)-methyltransferase 3A isoform X1 [KO:K17398] [EC:2.1.1.37]
126964350  DNA (cytosine-5)-methyltransferase 3B isoform X1 [KO:K17399] [EC:2.1.1.37]
126949758  adenosylhomocysteinase 3 isoform X1 [KO:K01251] [EC:3.13.2.1]
126964235  adenosylhomocysteinase isoform X1 [KO:K01251] [EC:3.13.2.1]
126946709  LOW QUALITY PROTEIN: adenosylhomocysteinase-like [KO:K01251] [EC:3.13.2.1]
126929660  S-adenosylhomocysteine hydrolase-like protein 1 isoform X1 [KO:K01251] [EC:3.13.2.1]
126930061  branched-chain-amino-acid aminotransferase, cytosolic isoform X1 [KO:K00826] [EC:2.6.1.42]
126943581  branched-chain-amino-acid aminotransferase, mitochondrial isoform X1 [KO:K00826] [EC:2.6.1.42]
126956688  alanine--glyoxylate aminotransferase 2, mitochondrial isoform X1 [KO:K00827] [EC:2.6.1.44 2.6.1.40]
126953682  glutamate--cysteine ligase catalytic subunit [KO:K11204] [EC:6.3.2.2]
126964268  glutamate--cysteine ligase regulatory subunit [KO:K11205]
126964227  glutathione synthetase [KO:K21456] [EC:6.3.2.3]
126956249  cysteine dioxygenase type 1 isoform X1 [KO:K00456] [EC:1.13.11.20]
126963395  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
126961207  putative aspartate aminotransferase, cytoplasmic 2 isoform X1 [KO:K14454] [EC:2.6.1.1]
126944962  aspartate aminotransferase, mitochondrial isoform X1 [KO:K14455] [EC:2.6.1.1]
126963747  3-mercaptopyruvate sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
126963754  thiosulfate sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
126930526  L-lactate dehydrogenase B chain [KO:K00016] [EC:1.1.1.27]
126937679  L-lactate dehydrogenase A chain [KO:K00016] [EC:1.1.1.27]
126963002  L-lactate dehydrogenase B chain-like [KO:K00016] [EC:1.1.1.27]
126933044  L-lactate dehydrogenase B chain-like [KO:K00016] [EC:1.1.1.27]
126958475  L-lactate dehydrogenase A-like 6B [KO:K00016] [EC:1.1.1.27]
126934669  L-lactate dehydrogenase A-like 6A [KO:K00016] [EC:1.1.1.27]
126934672  L-lactate dehydrogenase A chain [KO:K00016] [EC:1.1.1.27]
126934675  L-lactate dehydrogenase C chain [KO:K00016] [EC:1.1.1.27]
126940509  L-lactate dehydrogenase A chain-like [KO:K00016] [EC:1.1.1.27]
126933605  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
126950379  malate dehydrogenase, mitochondrial isoform X1 [KO:K00026] [EC:1.1.1.37]
126931488  serine dehydratase-like isoform X1 [KO:K17989] [EC:4.3.1.17 4.3.1.19]
126931491  L-serine dehydratase/L-threonine deaminase isoform X1 [KO:K17989] [EC:4.3.1.17 4.3.1.19]
126930998  D-3-phosphoglycerate dehydrogenase isoform X1 [KO:K00058] [EC:1.1.1.95 1.1.1.399]
126937576  phosphoserine aminotransferase isoform X1 [KO:K00831] [EC:2.6.1.52]
Compound
C00019  S-Adenosyl-L-methionine
C00021  S-Adenosyl-L-homocysteine
C00022  Pyruvate
C00041  L-Alanine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00065  L-Serine
C00073  L-Methionine
C00094  Sulfite
C00097  L-Cysteine
C00109  2-Oxobutanoate
C00155  L-Homocysteine
C00170  5'-Methylthioadenosine
C00197  3-Phospho-D-glycerate
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00409  Methanethiol
C00441  L-Aspartate 4-semialdehyde
C00491  L-Cystine
C00506  L-Cysteate
C00606  3-Sulfino-L-alanine
C00793  D-Cysteine
C00957  Mercaptopyruvate
C00979  O-Acetyl-L-serine
C01005  O-Phospho-L-serine
C01077  O-Acetyl-L-homoserine
C01102  O-Phospho-L-homoserine
C01118  O-Succinyl-L-homoserine
C01137  S-Adenosylmethioninamine
C01180  4-Methylthio-2-oxobutanoic acid
C01234  1-Aminocyclopropane-1-carboxylate
C01817  L-Homocystine
C01962  Thiocysteine
C02218  Dehydroalanine
C02291  L-Cystathionine
C02356  (S)-2-Aminobutanoate
C02989  L-Methionine S-oxide
C03082  4-Phospho-L-aspartate
C03089  5-Methylthio-D-ribose
C03145  N-Formylmethionine
C03232  3-Phosphonooxypyruvate
C03431  S-Inosyl-L-homocysteine
C03539  S-Ribosyl-L-homocysteine
C04188  S-Methyl-5-thio-D-ribose 1-phosphate
C04582  S-Methyl-5-thio-D-ribulose 1-phosphate
C05324  Nicotianamine
C05524  Aminoacyl-L-methionine
C05526  S-Glutathionyl-L-cysteine
C05527  3-Sulfinylpyruvate
C05528  3-Sulfopyruvate
C05823  3-Mercaptolactate
C05824  S-Sulfo-L-cysteine
C06547  Ethylene
C08276  3-(Methylthio)propanoate
C09306  Sulfur dioxide
C11437  1-Deoxy-D-xylulose 5-phosphate
C11481  HSO3-
C11499  (S)-3-Sulfolactate
C11537  (2R)-3-Sulfolactate
C15606  1,2-Dihydroxy-5-(methylthio)pent-1-en-3-one
C15650  2,3-Diketo-5-methylthiopentyl-1-phosphate
C15651  2-Hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
C18049  N-Acyl-L-homoserine lactone
C19787  5'-S-Methyl-5'-thioinosine
C21015  gamma-L-Glutamyl-L-2-aminobutyrate
C21016  Ophthalmate
C22359  S-Methyl-1-thio-D-xylulose 5-phosphate
Reference
  Authors
Sekowska A, Denervaud V, Ashida H, Michoud K, Haas D, Yokota A, Danchin A
  Title
Bacterial variations on the methionine salvage pathway.
  Journal
BMC Microbiol 4:9 (2004)
DOI:10.1186/1471-2180-4-9
Reference
  Authors
Ashida H, Saito Y, Kojima C, Kobayashi K, Ogasawara N, Yokota A.
  Title
A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO.
  Journal
Science 302:286-90 (2003)
DOI:10.1126/science.1086997
Reference
  Authors
Sekowska A, Danchin A.
  Title
The methionine salvage pathway in Bacillus subtilis.
  Journal
BMC Microbiol 2:8 (2002)
DOI:10.1186/1471-2180-2-8
Reference
  Authors
Berger BJ, English S, Chan G, Knodel MH.
  Title
Methionine regeneration and aminotransferases in Bacillus subtilis, Bacillus cereus, and Bacillus anthracis.
  Journal
J Bacteriol 185:2418-31 (2003)
DOI:10.1128/JB.185.8.2418-2431.2003
Reference
  Authors
Goyer A, Collakova E, Shachar-Hill Y, Hanson AD
  Title
Functional characterization of a methionine gamma-lyase in Arabidopsis and its implication in an alternative to the reverse trans-sulfuration pathway.
  Journal
Plant Cell Physiol 48:232-42 (2007)
DOI:10.1093/pcp/pcl055
Reference
  Authors
Rebeille F, Jabrin S, Bligny R, Loizeau K, Gambonnet B, Van Wilder V, Douce R, Ravanel S
  Title
Methionine catabolism in Arabidopsis cells is initiated by a gamma-cleavage process and leads to S-methylcysteine and isoleucine syntheses.
  Journal
Proc Natl Acad Sci U S A 103:15687-92 (2006)
DOI:10.1073/pnas.0606195103
Reference
  Authors
Pirkov I, Norbeck J, Gustafsson L, Albers E
  Title
A complete inventory of all enzymes in the eukaryotic methionine salvage pathway.
  Journal
FEBS J 275:4111-20 (2008)
DOI:10.1111/j.1742-4658.2008.06552.x
Reference
  Authors
Ashida H, Saito Y, Kojima C, Yokota A
  Title
Enzymatic characterization of 5-methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway in Bacillus subtilis.
  Journal
Biosci Biotechnol Biochem 72:959-67 (2008)
DOI:10.1271/bbb.70651
Reference
  Authors
Kitabatake M, So MW, Tumbula DL, Soll D
  Title
Cysteine biosynthesis pathway in the archaeon Methanosarcina barkeri encoded by acquired bacterial genes?
  Journal
J Bacteriol 182:143-5 (2000)
DOI:10.1128/JB.182.1.143-145.2000
Reference
  Authors
Mino K, Ishikawa K
  Title
Characterization of a novel thermostable O-acetylserine sulfhydrylase from Aeropyrum pernix K1.
  Journal
J Bacteriol 185:2277-84 (2003)
DOI:10.1128/JB.185.7.2277-2284.2003
Reference
  Authors
Tanabe S
  Title
Development of assay methods for endogenous inorganic sulfur compounds and sulfurtransferases and evaluation of the physiological functions of bound sulfur.
  Journal
Yakugaku Zasshi 128:881-900 (2008)
DOI:10.1248/yakushi.128.881
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Gutierrez JA, Crowder T, Rinaldo-Matthis A, Ho MC, Almo SC, Schramm VL
  Title
Transition state analogs of 5'-methylthioadenosine nucleosidase disrupt quorum sensing.
  Journal
Nat Chem Biol 5:251-7 (2009)
DOI:10.1038/nchembio.153
Related
pathway
mthb00010  Glycolysis / Gluconeogenesis
mthb00250  Alanine, aspartate and glutamate metabolism
mthb00260  Glycine, serine and threonine metabolism
mthb00290  Valine, leucine and isoleucine biosynthesis
mthb00430  Taurine and hypotaurine metabolism
mthb00480  Glutathione metabolism
mthb00620  Pyruvate metabolism
mthb00640  Propanoate metabolism
mthb00770  Pantothenate and CoA biosynthesis
mthb00900  Terpenoid backbone biosynthesis
mthb00920  Sulfur metabolism
KO pathway
ko00270   
LinkDB

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