KEGG   PATHWAY: nsu04146
Entry
nsu04146                    Pathway                                
Name
Peroxisome - Neomonachus schauinslandi (Hawaiian monk seal)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
nsu04146  Peroxisome
nsu04146

Other DBs
GO: 0005777
Organism
Neomonachus schauinslandi (Hawaiian monk seal) [GN:nsu]
Gene
110575753  PEX16; peroxisomal biogenesis factor 16 isoform X1 [KO:K13335]
110583088  PEX3; peroxisomal biogenesis factor 3 isoform X1 [KO:K13336]
110585985  peroxisomal biogenesis factor 19-like [KO:K13337]
110573412  PEX19; peroxisomal biogenesis factor 19 isoform X1 [KO:K13337]
110580300  ABCD3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
110579882  PEX1; peroxisome biogenesis factor 1 isoform X1 [KO:K13338]
110582046  PEX6; peroxisome biogenesis factor 6 isoform X1 [KO:K13339]
110580984  PEX26; peroxisome assembly protein 26 isoform X1 [KO:K13340]
110583189  PEX7; peroxisomal biogenesis factor 7 isoform X1 [KO:K13341]
110581105  PEX5; peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
110582370  PEX5L; PEX5-related protein isoform X1 [KO:K13342]
110574656  PEX14; peroxisomal membrane protein PEX14 [KO:K13343]
110588761  PEX13; peroxisome biogenesis factor 13 [KO:K13344]
110593055  PEX12; peroxisome assembly protein 12 [KO:K13345]
110575104  PEX10; peroxisome biogenesis factor 10 [KO:K13346]
110578686  PEX2; peroxisome biogenesis factor 2 [KO:K06664]
110582299  PXMP2; peroxisomal membrane protein 2 [KO:K13347]
110574557  MPV17L2; mpv17-like protein 2 [KO:K13348]
110587299  MPV17; protein Mpv17 isoform X1 [KO:K13348]
110588030  MPV17L; mpv17-like protein [KO:K13349]
110579317  PXMP4; peroxisomal membrane protein 4 [KO:K13350]
110572292  PEX11A; peroxisomal membrane protein 11A isoform X1 [KO:K13351]
110578562  PEX11B; peroxisomal membrane protein 11B isoform X1 [KO:K13352]
110593957  PEX11G; peroxisomal membrane protein 11C isoform X1 [KO:K13353]
110578197  SLC25A17; peroxisomal membrane protein PMP34 [KO:K13354]
110570751  HACL1; 2-hydroxyacyl-CoA lyase 1 [KO:K12261] [EC:4.1.2.63]
110585918  AMACR; alpha-methylacyl-CoA racemase isoform X2 [KO:K01796] [EC:5.1.99.4]
110586584  PHYH; phytanoyl-CoA dioxygenase, peroxisomal isoform X1 [KO:K00477] [EC:1.14.11.18]
110569774  ACOX3; peroxisomal acyl-coenzyme A oxidase 3 [KO:K00232] [EC:1.3.3.6]
110572592  ACOX1; peroxisomal acyl-coenzyme A oxidase 1 isoform X1 [KO:K00232] [EC:1.3.3.6]
110584818  ACOX2; peroxisomal acyl-coenzyme A oxidase 2 [KO:K10214] [EC:1.17.99.3]
110590913  HSD17B4; peroxisomal multifunctional enzyme type 2 isoform X1 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
110575296  SCP2; sterol carrier protein 2 isoform X1 [KO:K08764] [EC:2.3.1.176]
110581717  BAAT; bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
110581808  LOW QUALITY PROTEIN: bile acid-CoA:amino acid N-acyltransferase-like [KO:K00659] [EC:2.3.1.65 3.1.2.2]
110582430  EHHADH; peroxisomal bifunctional enzyme [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
110569659  ACAA1; 3-ketoacyl-CoA thiolase, peroxisomal isoform X1 [KO:K07513] [EC:2.3.1.16]
110588063  DECR2; peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] [KO:K13237] [EC:1.3.1.124]
110588256  peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]-like [KO:K13237] [EC:1.3.1.124]
110590337  ECH1; delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
110574538  ABCD1; ATP-binding cassette sub-family D member 1 [KO:K05675] [EC:7.6.2.4]
110580717  ABCD2; ATP-binding cassette sub-family D member 2 isoform X1 [KO:K05676] [EC:7.6.2.4]
110571727  ABCD4; lysosomal cobalamin transporter ABCD4 isoform X1 [KO:K05678] [EC:7.6.2.8]
110583856  SLC27A2; very long-chain acyl-CoA synthetase isoform X1 [KO:K08746] [EC:6.2.1.- 6.2.1.3]
110589571  ACSL5; long-chain-fatty-acid--CoA ligase 5 [KO:K01897] [EC:6.2.1.3]
110591300  ACSL6; long-chain-fatty-acid--CoA ligase 6 isoform X1 [KO:K01897] [EC:6.2.1.3]
110584237  ACSL1; long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
110591788  ACSL3; LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase 3 [KO:K01897] [EC:6.2.1.3]
110570546  ACSL4; long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
110592013  PECR; peroxisomal trans-2-enoyl-CoA reductase [KO:K07753] [EC:1.3.1.38]
110586679  ECI2; enoyl-CoA delta isomerase 2 [KO:K13239] [EC:5.3.3.8]
110591825  NUDT7; peroxisomal coenzyme A diphosphatase NUDT7 isoform X1 [KO:K17879] [EC:3.6.1.77]
110588702  NUDT12; NAD-capped RNA hydrolase NUDT12 isoform X1 [KO:K03426] [EC:3.6.1.22]
110589389  NUDT13; NAD(P)H pyrophosphatase NUDT13, mitochondrial [KO:K03426] [EC:3.6.1.22]
110590284  NUDT19; nucleoside diphosphate-linked moiety X motif 19 [KO:K13355] [EC:3.6.1.77]
110579302  ACOT8; acyl-coenzyme A thioesterase 8 [KO:K11992] [EC:3.1.2.27]
110581558  CRAT; carnitine O-acetyltransferase isoform X1 [KO:K00624] [EC:2.3.1.7]
110580162  CROT; LOW QUALITY PROTEIN: peroxisomal carnitine O-octanoyltransferase [KO:K05940] [EC:2.3.1.137]
110591702  MLYCD; malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
110585968  GNPAT; dihydroxyacetone phosphate acyltransferase isoform X1 [KO:K00649] [EC:2.3.1.42]
110591871  AGPS; alkyldihydroxyacetonephosphate synthase, peroxisomal [KO:K00803] [EC:2.5.1.26]
110581062  FAR2; fatty acyl-CoA reductase 2 isoform X1 [KO:K13356] [EC:1.2.1.84]
110576243  FAR1; fatty acyl-CoA reductase 1 isoform X1 [KO:K13356] [EC:1.2.1.84]
110592423  MVK; mevalonate kinase [KO:K00869] [EC:2.7.1.36]
110573493  PMVK; phosphomevalonate kinase [KO:K13273] [EC:2.7.4.2]
110570916  AGXT; serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
110592535  DAO; D-amino-acid oxidase [KO:K00273] [EC:1.4.3.3]
110583600  DDO; D-aspartate oxidase isoform X2 [KO:K00272] [EC:1.4.3.1]
110592189  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic isoform X1 [KO:K00031] [EC:1.1.1.42]
110572297  IDH2; isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
110578814  PAOX; peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 [KO:K00308] [EC:1.5.3.13]
110592885  PIPOX; peroxisomal sarcosine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
110582107  HMGCLL1; 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1 [KO:K01640] [EC:4.1.3.4]
110575177  HMGCL; hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [KO:K01640] [EC:4.1.3.4]
110580538  HAO2; hydroxyacid oxidase 2 isoform X1 [KO:K11517] [EC:1.1.3.15]
110579313  HAO1; hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
110576267  CAT; catalase [KO:K03781] [EC:1.11.1.6]
110591726  peroxiredoxin-5, mitochondrial-like [KO:K11187] [EC:1.11.1.24]
110575949  PRDX5; peroxiredoxin-5, mitochondrial [KO:K11187] [EC:1.11.1.24]
110570116  SOD1; superoxide dismutase [Cu-Zn] isoform X2 [KO:K04565] [EC:1.15.1.1]
110583031  SOD2; superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
110592813  NOS2; LOW QUALITY PROTEIN: nitric oxide synthase, inducible [KO:K13241] [EC:1.14.13.39]
110579778  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
110578980  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
110574946  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
110575006  PRDX1; peroxiredoxin-1 isoform X2 [KO:K13279] [EC:1.11.1.24]
123325293  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
110581716  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
110592809  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
110588489  EPHX2; bifunctional epoxide hydrolase 2 isoform X1 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
110582754  GSTK1; glutathione S-transferase kappa 1 isoform X1 [KO:K13299] [EC:2.5.1.18]
110587475  XDH; xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
110585445  dehydrogenase/reductase SDR family member 4 isoform X1 [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
nsu00071  Fatty acid degradation
nsu00120  Primary bile acid biosynthesis
nsu00230  Purine metabolism
nsu00564  Glycerophospholipid metabolism
nsu00565  Ether lipid metabolism
nsu00830  Retinol metabolism
nsu00900  Terpenoid backbone biosynthesis
nsu03320  PPAR signaling pathway
KO pathway
ko04146   
LinkDB

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