KEGG   PATHWAY: ray04146
Entry
ray04146                    Pathway                                
Name
Peroxisome - Rousettus aegyptiacus (Egyptian rousette)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
ray04146  Peroxisome
ray04146

Other DBs
GO: 0005777
Organism
Rousettus aegyptiacus (Egyptian rousette) [GN:ray]
Gene
107511873  PEX16; peroxisomal biogenesis factor 16 [KO:K13335]
107497587  PEX3; peroxisomal biogenesis factor 3 [KO:K13336]
107508012  PEX19; peroxisomal biogenesis factor 19 [KO:K13337]
107517585  ABCD3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
107519066  PEX1; peroxisome biogenesis factor 1 isoform X1 [KO:K13338]
107501990  PEX6; peroxisome biogenesis factor 6 isoform X1 [KO:K13339]
107500336  PEX26; peroxisome assembly protein 26 [KO:K13340]
107521294  PEX7; peroxisomal biogenesis factor 7 [KO:K13341]
107519810  PEX5; peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
107501643  PEX5L; PEX5-related protein isoform X1 [KO:K13342]
107513103  PEX14; peroxisomal membrane protein PEX14 [KO:K13343]
107502444  PEX13; peroxisome biogenesis factor 13 [KO:K13344]
107499987  PEX12; peroxisome assembly protein 12 [KO:K13345]
107510680  PEX10; LOW QUALITY PROTEIN: peroxisome biogenesis factor 10 [KO:K13346]
107501708  PEX2; peroxisome biogenesis factor 2 [KO:K06664]
107511556  PXMP2; peroxisomal membrane protein 2 [KO:K13347]
107502142  MPV17; protein Mpv17 isoform X1 [KO:K13348]
107521660  MPV17L2; mpv17-like protein 2 [KO:K13348]
107518216  MPV17L; mpv17-like protein [KO:K13349]
107519495  PXMP4; peroxisomal membrane protein 4 [KO:K13350]
107514158  PEX11A; peroxisomal membrane protein 11A isoform X1 [KO:K13351]
107509961  PEX11B; peroxisomal membrane protein 11B [KO:K13352]
107519911  PEX11G; peroxisomal membrane protein 11C [KO:K13353]
107519704  SLC25A17; peroxisomal membrane protein PMP34 isoform X1 [KO:K13354]
107508452  HACL1; 2-hydroxyacyl-CoA lyase 1 isoform X1 [KO:K12261] [EC:4.1.2.63]
107498645  AMACR; LOW QUALITY PROTEIN: alpha-methylacyl-CoA racemase [KO:K01796] [EC:5.1.99.4]
107504844  PHYH; phytanoyl-CoA dioxygenase, peroxisomal isoform X1 [KO:K00477] [EC:1.14.11.18]
107501215  ACOX3; peroxisomal acyl-coenzyme A oxidase 3 isoform X1 [KO:K00232] [EC:1.3.3.6]
107501445  ACOX1; peroxisomal acyl-coenzyme A oxidase 1 [KO:K00232] [EC:1.3.3.6]
107503398  ACOX2; peroxisomal acyl-coenzyme A oxidase 2 [KO:K10214] [EC:1.17.99.3]
107511154  HSD17B4; peroxisomal multifunctional enzyme type 2 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
107497927  SCP2; non-specific lipid-transfer protein [KO:K08764] [EC:2.3.1.176]
107499578  bile acid-CoA:amino acid N-acyltransferase-like [KO:K00659] [EC:2.3.1.65 3.1.2.2]
107499579  acyl-coenzyme A amino acid N-acyltransferase 2-like [KO:K00659] [EC:2.3.1.65 3.1.2.2]
107518255  EHHADH; peroxisomal bifunctional enzyme [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
107499599  ACAA1; 3-ketoacyl-CoA thiolase, peroxisomal [KO:K07513] [EC:2.3.1.16]
107506135  DECR2; peroxisomal 2,4-dienoyl-CoA reductase isoform X1 [KO:K13237] [EC:1.3.1.124]
107520964  ECH1; delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
107504703  ABCD1; ATP-binding cassette sub-family D member 1 [KO:K05675] [EC:7.6.2.4]
107514210  ABCD2; ATP-binding cassette sub-family D member 2 isoform X1 [KO:K05676] [EC:7.6.2.4]
107507721  ABCD4; ATP-binding cassette sub-family D member 4 isoform X1 [KO:K05678] [EC:7.6.2.8]
107502008  SLC27A2; very long-chain acyl-CoA synthetase [KO:K08746] [EC:6.2.1.- 6.2.1.3]
107510452  ACSL1; long-chain-fatty-acid--CoA ligase 1 [KO:K01897] [EC:6.2.1.3]
107516713  ACSL3; long-chain-fatty-acid--CoA ligase 3 [KO:K01897] [EC:6.2.1.3]
107519321  ACSL4; long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
107518257  ACSL5; long-chain-fatty-acid--CoA ligase 5 isoform X1 [KO:K01897] [EC:6.2.1.3]
107497046  ACSL6; long-chain-fatty-acid--CoA ligase 6 isoform X1 [KO:K01897] [EC:6.2.1.3]
107516737  PECR; peroxisomal trans-2-enoyl-CoA reductase [KO:K07753] [EC:1.3.1.38]
107503809  ECI2; LOW QUALITY PROTEIN: enoyl-CoA delta isomerase 2, mitochondrial [KO:K13239] [EC:5.3.3.8]
107506256  NUDT7; peroxisomal coenzyme A diphosphatase NUDT7 [KO:K17879] [EC:3.6.1.77]
107509151  NUDT12; peroxisomal NADH pyrophosphatase NUDT12 [KO:K03426] [EC:3.6.1.22]
107516816  NUDT13; nucleoside diphosphate-linked moiety X motif 13 isoform X1 [KO:K03426] [EC:3.6.1.22]
107514587  ACOT8; LOW QUALITY PROTEIN: acyl-coenzyme A thioesterase 8 [KO:K11992] [EC:3.1.2.27]
107504529  CRAT; carnitine O-acetyltransferase isoform X1 [KO:K00624] [EC:2.3.1.7]
107512459  CROT; peroxisomal carnitine O-octanoyltransferase isoform X1 [KO:K05940] [EC:2.3.1.137]
107521340  MLYCD; malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
107520038  GNPAT; dihydroxyacetone phosphate acyltransferase [KO:K00649] [EC:2.3.1.42]
107514665  AGPS; alkyldihydroxyacetonephosphate synthase, peroxisomal [KO:K00803] [EC:2.5.1.26]
107514389  FAR2; fatty acyl-CoA reductase 2 isoform X1 [KO:K13356] [EC:1.2.1.84]
107501738  FAR1; fatty acyl-CoA reductase 1 [KO:K13356] [EC:1.2.1.84]
107500148  MVK; mevalonate kinase [KO:K00869] [EC:2.7.1.36]
107505476  PMVK; phosphomevalonate kinase [KO:K13273] [EC:2.7.4.2]
107504720  phosphomevalonate kinase-like [KO:K13273] [EC:2.7.4.2]
107510573  AGXT; serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
107500140  DAO; D-amino-acid oxidase [KO:K00273] [EC:1.4.3.3]
107506322  DDO; D-aspartate oxidase [KO:K00272] [EC:1.4.3.1]
107505158  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
107514157  IDH2; isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
107517150  PAOX; peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 [KO:K00308] [EC:1.5.3.13]
107507766  PIPOX; peroxisomal sarcosine oxidase isoform X1 [KO:K00306] [EC:1.5.3.1 1.5.3.7]
107511376  HMGCLL1; 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic [KO:K01640] [EC:4.1.3.4]
107501014  HMGCL; hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [KO:K01640] [EC:4.1.3.4]
107508434  HAO1; hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
107504104  CAT; catalase [KO:K03781] [EC:1.11.1.6]
107497107  PRDX5; peroxiredoxin-5, mitochondrial [KO:K11187] [EC:1.11.1.24]
107519576  SOD1; superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
107514727  SOD2; superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
107497410  NOS2; nitric oxide synthase, inducible isoform X1 [KO:K13241] [EC:1.14.13.39]
107506892  PRDX1; peroxiredoxin-1 [KO:K13279] [EC:1.11.1.24]
107501300  LOW QUALITY PROTEIN: peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
107507539  EPHX2; bifunctional epoxide hydrolase 2 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
107516990  GSTK1; glutathione S-transferase kappa 1 isoform X1 [KO:K13299] [EC:2.5.1.18]
107505738  XDH; LOW QUALITY PROTEIN: xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
107497990  dehydrogenase/reductase SDR family member 4-like isoform X1 [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
ray00071  Fatty acid degradation
ray00120  Primary bile acid biosynthesis
ray00230  Purine metabolism
ray00564  Glycerophospholipid metabolism
ray00565  Ether lipid metabolism
ray00830  Retinol metabolism
ray00900  Terpenoid backbone biosynthesis
ray03320  PPAR signaling pathway
KO pathway
ko04146   
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