KEGG   PATHWAY: sdu00513
Entry
sdu00513                    Pathway                                
Name
Various types of N-glycan biosynthesis - Seriola dumerili (greater amberjack)
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
sdu00513  Various types of N-glycan biosynthesis
sdu00513

Other DBs
GO: 0006487
Organism
Seriola dumerili (greater amberjack) [GN:sdu]
Gene
111232689  alg13; putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 [KO:K07432] [EC:2.4.1.141]
111237584  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 [KO:K07432] [EC:2.4.1.141]
111237624  alg14; UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform X1 [KO:K07441] [EC:2.4.1.141]
111217543  alg1; chitobiosyldiphosphodolichol beta-mannosyltransferase [KO:K03842] [EC:2.4.1.142]
111236927  alg2; alpha-1,3/1,6-mannosyltransferase ALG2 [KO:K03843] [EC:2.4.1.132 2.4.1.257]
111237946  GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [KO:K03844] [EC:2.4.1.131]
111238722  GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [KO:K03844] [EC:2.4.1.131]
111229092  alg3; dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase isoform X1 [KO:K03845] [EC:2.4.1.258]
111234388  alg9; alpha-1,2-mannosyltransferase ALG9 isoform X1 [KO:K03846] [EC:2.4.1.259 2.4.1.261]
111224930  alg12; dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase [KO:K03847] [EC:2.4.1.260]
111223045  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [KO:K07151] [EC:2.4.99.18]
111222354  stt3a; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A [KO:K07151] [EC:2.4.99.18]
111227695  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like [KO:K07151] [EC:2.4.99.18]
111221761  rpn1; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [KO:K12666]
111221930  rpn2; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [KO:K12667]
111223827  dad1; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [KO:K12668]
111227589  ddost; dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [KO:K12670]
111230408  magnesium transporter protein 1-like [KO:K19478]
111229380  tumor suppressor candidate 3 isoform X1 [KO:K19478]
111231612  ostc; oligosaccharyltransferase complex subunit OSTC [KO:K26501]
111229872  tmem258; transmembrane protein 258 [KO:K26502]
111221245  endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase-like [KO:K23741] [EC:3.2.1.209]
111226918  man1b1; endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase [KO:K23741] [EC:3.2.1.209]
111218623  man1a2; mannosyl-oligosaccharide 1,2-alpha-mannosidase IB [KO:K01230] [EC:3.2.1.113]
111237597  man1a1; mannosyl-oligosaccharide 1,2-alpha-mannosidase IA [KO:K01230] [EC:3.2.1.113]
111235719  mannosyl-oligosaccharide 1,2-alpha-mannosidase IA-like isoform X1 [KO:K01230] [EC:3.2.1.113]
111220846  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like [KO:K00726] [EC:2.4.1.101]
111222600  mgat1; alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [KO:K00726] [EC:2.4.1.101]
111228707  man2a2; alpha-mannosidase 2x [KO:K01231] [EC:3.2.1.114]
111238819  man2a1; alpha-mannosidase 2 [KO:K01231] [EC:3.2.1.114]
111240326  mgat2; alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [KO:K00736] [EC:2.4.1.143]
111238109  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like [KO:K00736] [EC:2.4.1.143]
111228623  hexa; beta-hexosaminidase subunit alpha [KO:K12373] [EC:3.2.1.52]
111239397  hexb; beta-hexosaminidase subunit beta isoform X1 [KO:K12373] [EC:3.2.1.52]
111240065  fut8; alpha-(1,6)-fucosyltransferase isoform X1 [KO:K00717] [EC:2.4.1.68]
111220379  hexdc; hexosaminidase D [KO:K14459] [EC:3.2.1.52]
111222525  mgat4c; alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C [KO:K13748] [EC:2.4.1.201 2.4.1.145]
111229827  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [KO:K13748] [EC:2.4.1.201 2.4.1.145]
111237016  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [KO:K13748] [EC:2.4.1.201 2.4.1.145]
111218149  mgat4a; alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [KO:K00738] [EC:2.4.1.145]
111235921  mgat4b; alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X1 [KO:K00738] [EC:2.4.1.145]
111233512  b4galt1; beta-1,4-galactosyltransferase 1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
111237265  beta-1,4-galactosyltransferase 1-like [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
111230961  b4galt2; beta-1,4-galactosyltransferase 2 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
111219224  b4galt3; beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
111219126  beta-1,4-galactosyltransferase 3-like [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
111235761  beta-1,4-galactosyltransferase 3-like [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
111231853  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like [KO:K00781] [EC:2.4.3.6]
111229061  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like [KO:K00781] [EC:2.4.3.6]
111228500  beta-1,4-N-acetylgalactosaminyltransferase 3-like [KO:K09656] [EC:2.4.1.244]
111228650  b4galnt4; N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 [KO:K09657] [EC:2.4.1.244]
111221584  chst8; carbohydrate sulfotransferase 8 [KO:K09672] [EC:2.8.2.-]
111233731  carbohydrate sulfotransferase 8-like [KO:K09672] [EC:2.8.2.-]
Compound
G00011   
G00012   
G00013   
G00014   
G00015   
G00016  Core fucose
G00017   
G00179   
G01813   
G05477   
G10665   
G10694   
G10716   
G10770   
G10841   
G10920   
G11000   
G11040   
G11933   
G12617   
G12625   
G12626   
G13047   
G13048   
G13049   
G13050   
G13055   
G13056   
G13057   
G13058   
G13059   
Reference
PMID:11412862
  Authors
Munro S.
  Title
What can yeast tell us about N-linked glycosylation in the Golgi apparatus?
  Journal
FEBS Lett 498:223-7 (2001)
DOI:10.1016/S0014-5793(01)02488-7
Reference
PMID:9878803
  Authors
Dean N.
  Title
Asparagine-linked glycosylation in the yeast Golgi.
  Journal
Biochim Biophys Acta 1426:309-22 (1999)
DOI:10.1016/S0304-4165(98)00132-9
Reference
PMID:9878780
  Authors
Herscovics A.
  Title
Processing glycosidases of Saccharomyces cerevisiae.
  Journal
Biochim Biophys Acta 1426:275-85 (1999)
DOI:10.1016/S0304-4165(98)00129-9
Reference
PMID:9218445
  Authors
Wang XH, Nakayama K, Shimma Y, Tanaka A, Jigami Y.
  Title
MNN6, a member of the KRE2/MNT1 family, is the gene for mannosylphosphate transfer in Saccharomyces cerevisiae.
  Journal
J Biol Chem 272:18117-24 (1997)
DOI:10.1074/jbc.272.29.18117
Reference
PMID:9756928
  Authors
Rayner JC, Munro S.
  Title
Identification of the MNN2 and MNN5 mannosyltransferases required for forming and extending the mannose branches of the outer chain mannans of Saccharomyces cerevisiae.
  Journal
J Biol Chem 273:26836-43 (1998)
DOI:10.1074/jbc.273.41.26836
Reference
PMID:10037752
  Authors
Jungmann J, Rayner JC, Munro S.
  Title
The Saccharomyces cerevisiae protein Mnn10p/Bed1p is a subunit of a Golgi mannosyltransferase complex.
  Journal
J Biol Chem 274:6579-85 (1999)
DOI:10.1074/jbc.274.10.6579
Reference
PMID:8253757
  Authors
Nakanishi-Shindo Y, Nakayama K, Tanaka A, Toda Y, Jigami Y.
  Title
Structure of the N-linked oligosaccharides that show the complete loss of alpha-1,6-polymannose outer chain from och1, och1 mnn1, and och1 mnn1 alg3 mutants of Saccharomyces cerevisiae.
  Journal
J Biol Chem 268:26338-45 (1993)
Reference
PMID:20233335
  Authors
Gomord V, Fitchette AC, Menu-Bouaouiche L, Saint-Jore-Dupas C, Plasson C, Michaud D, Faye L
  Title
Plant-specific glycosylation patterns in the context of therapeutic protein production.
  Journal
Plant Biotechnol J 8:564-87 (2010)
DOI:10.1111/j.1467-7652.2009.00497.x
Related
pathway
sdu00510  N-Glycan biosynthesis
KO pathway
ko00513   
LinkDB

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