KEGG   PATHWAY: shab04814
Entry
shab04814                   Pathway                                
Name
Motor proteins - Strigops habroptila (Kakapo)
Class
Cellular Processes; Cell motility
Pathway map
shab04814  Motor proteins
shab04814

Organism
Strigops habroptila (Kakapo) [GN:shab]
Gene
115607574  DYNC1H1; cytoplasmic dynein 1 heavy chain 1 [KO:K10413]
115603640  DYNC2H1; cytoplasmic dynein 2 heavy chain 1 isoform X1 [KO:K10414]
115610639  DYNC1I1; cytoplasmic dynein 1 intermediate chain 1 isoform X1 [KO:K10415]
115608561  DYNC1I2; cytoplasmic dynein 1 intermediate chain 2 isoform X1 [KO:K10415]
115619096  cytoplasmic dynein 1 light intermediate chain 2-like isoform X1 [KO:K10416]
115619451  DYNC1LI1; cytoplasmic dynein 1 light intermediate chain 1 [KO:K10416]
115619869  DYNC1LI2; cytoplasmic dynein 1 light intermediate chain 2 isoform X1 [KO:K10416]
115613586  DYNC2LI1; cytoplasmic dynein 2 light intermediate chain 1 isoform X1 [KO:K10417]
115601901  DYNLL2; dynein light chain 2, cytoplasmic isoform X1 [KO:K10418]
115614441  dynein light chain 1, cytoplasmic-like [KO:K10418]
115614442  dynein light chain 1, cytoplasmic [KO:K10418]
115601364  DYNLRB2; dynein light chain roadblock-type 2 isoform X1 [KO:K10419]
115615107  DYNLRB1; dynein light chain roadblock-type 1 isoform X1 [KO:K10419]
115613500  DYNLT1; dynein light chain Tctex-type 1 [KO:K10420]
115604076  DYNLT3; dynein light chain Tctex-type 3 isoform X1 [KO:K10420]
115613506  TCTE3; tctex1 domain-containing protein 3 [KO:K25419]
115611509  TCTEX1D4; tctex1 domain-containing protein 4 [KO:K25420]
115612231  TCTEX1D1; tctex1 domain-containing protein 1 [KO:K25421]
115605035  DNAH5; dynein heavy chain 5, axonemal [KO:K10408]
115616573  DNAH17; dynein heavy chain 17, axonemal isoform X1 [KO:K10408]
115616771  DNAH9; dynein heavy chain 9, axonemal [KO:K10408]
115606547  DNAH3; dynein heavy chain 3, axonemal [KO:K10408]
115613613  DNAH14; dynein heavy chain 14, axonemal isoform X1 [KO:K10408]
115608093  DNAH7; dynein heavy chain 7, axonemal [KO:K10408]
115613899  DNAH8; LOW QUALITY PROTEIN: dynein heavy chain 8, axonemal [KO:K10408]
115614126  DNAH1; dynein heavy chain 1, axonemal [KO:K10408]
115602733  dynein heavy chain 5, axonemal-like [KO:K10408]
115614947  DNAH10; dynein heavy chain 10, axonemal isoform X1 [KO:K10408]
115619334  DNAI1; dynein intermediate chain 1, axonemal isoform X1 [KO:K10409]
115616740  DNAI2; dynein intermediate chain 2, axonemal [KO:K11143]
115611517  WDR63; WD repeat-containing protein 63 isoform X1 [KO:K24722]
115611480  WDR78; WD repeat-containing protein 78 [KO:K24723]
115615487  DNALI1; axonemal dynein light intermediate polypeptide 1 [KO:K10410]
115604785  DNAL4; dynein light chain 4, axonemal [KO:K10412]
115610584  DCTN1; dynactin subunit 1 isoform X1 [KO:K04648]
115618756  DCTN2; dynactin subunit 2 isoform X1 [KO:K10424]
115619525  DCTN3; dynactin subunit 3 [KO:K10425]
115615451  DCTN4; dynactin subunit 4 isoform X1 [KO:K10426]
115606785  DCTN5; dynactin subunit 5 [KO:K10427]
115605010  DCTN6; dynactin subunit 6 [KO:K10428]
115608983  ACTR1A; alpha-centractin [KO:K16575]
115606711  actin-related protein 10 isoform X1 [KO:K16576]
115604872  CAPZA2; F-actin-capping protein subunit alpha-2 isoform X1 [KO:K10364]
115605317  CAPZA3; F-actin-capping protein subunit alpha-3 [KO:K10364]
115602239  CAPZA1; F-actin-capping protein subunit alpha-1 [KO:K10364]
115617297  CAPZB; F-actin-capping protein subunit beta isoform X1 [KO:K10365]
115614769  BICDL1; BICD family-like cargo adapter 1 isoform X1 [KO:K16756]
115600966  HOOK3; protein Hook homolog 3 isoform X1 [KO:K16536]
115611153  tubulin alpha-3 chain isoform X1 [KO:K07374]
115605668  tubulin alpha-3 chain [KO:K07374]
115605713  tubulin alpha-3 chain-like [KO:K07374]
115605750  TUBA8; tubulin alpha-8 chain isoform X1 [KO:K07374]
115605751  tubulin alpha-2 chain [KO:K07374]
115618641  TUBA1A; tubulin alpha-1A chain [KO:K07374]
115618643  tubulin alpha-1B chain [KO:K07374]
115618644  tubulin alpha-1C chain [KO:K07374]
115608292  tubulin alpha-4A chain-like [KO:K07374]
115608293  tubulin alpha-5 chain [KO:K07374]
115602249  tubulin alpha-8 chain [KO:K07374]
115604599  TUBB6; tubulin beta-6 chain isoform X1 [KO:K07375]
115617253  TUBB4B; tubulin beta-4B chain [KO:K07375]
115619541  TUBB3; tubulin beta-3 chain [KO:K07375]
115615075  TUBB1; tubulin beta-1 chain isoform X1 [KO:K07375]
115615078  tubulin beta-2 chain [KO:K07375]
115603458  TUBB; tubulin beta chain [KO:K07375]
115617618  TUBG1; tubulin gamma-1 chain [KO:K10389]
115602162  TUBD1; tubulin delta chain isoform X1 [KO:K10390]
115609659  TUBE1; tubulin epsilon chain isoform X1 [KO:K10391]
115618741  KIF5A; kinesin heavy chain isoform X1 [KO:K10396]
115609003  KIF5C; kinesin heavy chain [KO:K10396]
115615688  KIF5B; kinesin-1 heavy chain isoform X1 [KO:K10396]
115606528  KLC1; kinesin light chain 1 isoform X1 [KO:K10407]
115613596  KLC4; kinesin light chain 4 isoform X1 [KO:K10407]
115615660  KIF3A; kinesin-like protein KIF3A isoform X1 [KO:K10394]
115615180  KIF3B; kinesin-like protein KIF3B [KO:K20196]
115611947  KIFAP3; kinesin-associated protein 3 isoform X1 [KO:K25388]
115609233  KIF3C; kinesin-like protein KIF3C [KO:K20197]
115617442  KIF17; kinesin-like protein KIF17 isoform X1 [KO:K20198]
115611328  KIF1A; kinesin-like protein KIF1A isoform X1 [KO:K10392]
115617389  KIF1B; kinesin-like protein KIF1B isoform X1 [KO:K10392]
115603019  kinesin-like protein KIF1C [KO:K10392]
115612975  KIF13A; kinesin-like protein KIF13A isoform X1 [KO:K17914]
115609341  KIF13B; kinesin-like protein KIF13B isoform X1 [KO:K17914]
115612170  KIF14; kinesin-like protein KIF14 isoform X1 [KO:K17915]
115609546  KIF16B; kinesin-like protein KIF16B isoform X1 [KO:K17916]
115606490  STARD9; stAR-related lipid transfer protein 9 isoform X1 [KO:K16491]
115612458  KIF4A; chromosome-associated kinesin KIF4A isoform X1 [KO:K10395]
115612735  KIF7; kinesin-like protein KIF7 isoform X1 [KO:K18806]
115604972  KIF21A; kinesin-like protein KIF21A isoform X1 [KO:K24185]
115602340  KIF21B; kinesin-like protein KIF21B [KO:K24185]
115601261  KIF27; kinesin-like protein KIF27 isoform X1 [KO:K24186]
115607942  KIF11; kinesin-like protein KIF11 [KO:K10398]
115606865  kinesin-like protein KIF20A [KO:K10402]
115608184  KIF20B; kinesin-like protein KIF20B isoform X1 [KO:K10402]
115616082  KIF20A; kinesin-like protein KIF20A isoform X1 [KO:K10402]
115613122  KIF23; kinesin-like protein KIF23 isoform X1 [KO:K17387]
115610760  CENPE; centromere-associated protein E isoform X1 [KO:K11498]
115606697  KIF18A; kinesin-like protein KIF18A [KO:K10401]
115617753  KIF18B; kinesin-like protein KIF18B [KO:K26156]
115611132  KIF9; kinesin-like protein KIF9 isoform X1 [KO:K10397]
115613951  KIF6; kinesin-like protein KIF6 isoform X1 [KO:K10397]
115607313  KIF26A; kinesin-like protein KIF26A isoform X1 [KO:K10404]
115613715  KIF26B; kinesin-like protein KIF26B isoform X1 [KO:K10404]
115602137  KIF12; LOW QUALITY PROTEIN: kinesin-like protein KIF12 [KO:K10399]
115605192  KIF15; kinesin-like protein KIF15 isoform X1 [KO:K10400]
115611500  KIF2C; kinesin-like protein KIF2C isoform X1 [KO:K10393]
115619229  kinesin-like protein KIF2A [KO:K10393]
115619713  KIF24; kinesin-like protein KIF24 [KO:K10393]
115619718  KIF2A; kinesin-like protein KIF2A isoform X1 [KO:K10393]
115601174  KIFC3; kinesin-like protein KIFC3 isoform X1 [KO:K10406]
115613916  KIF25; kinesin-like protein KIF25 isoform X1 [KO:K18627]
115610867  MYO1G; unconventional myosin-Ig isoform X1 [KO:K10356]
115617766  MYO1D; unconventional myosin-Id [KO:K10356]
115618121  MYO1F; unconventional myosin-If [KO:K10356]
115612860  MYO1E; unconventional myosin-Ie isoform X1 [KO:K10356]
115618701  MYO1A; unconventional myosin-Ia isoform X1 [KO:K10356]
115601968  MYO1C; unconventional myosin-Ic isoform X1 [KO:K10356]
115614698  MYO1H; unconventional myosin-Ih [KO:K10356]
115609123  MYO1B; unconventional myosin-Ib isoform X1 [KO:K10356]
115607996  MYO3B; myosin-IIIb isoform X1 [KO:K08834] [EC:2.7.11.1]
115608572  MYO3A; myosin-IIIa isoform X1 [KO:K08834] [EC:2.7.11.1]
115612766  MYO5A; unconventional myosin-Va isoform X1 [KO:K10357]
115601132  MYO5B; unconventional myosin-Vb isoform X1 [KO:K10357]
115613362  MYO5C; unconventional myosin-Vc [KO:K10357]
115609661  MYO6; unconventional myosin-VI [KO:K10358]
115604173  MYO7A; unconventional myosin-VIIa isoform X1 [KO:K10359]
115612106  MYO7B; unconventional myosin-VIIb [KO:K21868]
115612552  MYO9A; unconventional myosin-IXa isoform X1 [KO:K10360]
115618259  MYO9B; unconventional myosin-IXb isoform X1 [KO:K10360]
115601480  MYO10; unconventional myosin-X isoform X1 [KO:K12559]
115608793  unconventional myosin-X-like isoform X1 [KO:K12559]
115616499  MYO15B; myosin XVB isoform X1 [KO:K10361]
115607326  MYO15A; unconventional myosin-XV [KO:K10361]
115603974  MYO16; unconventional myosin-XVI isoform X1 [KO:K17481]
115601925  MYO18A; unconventional myosin-XVIIIa isoform X1 [KO:K10362]
115614460  MYO18B; unconventional myosin-XVIIIb [KO:K10362]
115602050  MYO19; unconventional myosin-XIX isoform X1 [KO:K25838]
115616510  myosin-3-like [KO:K24220]
115616511  myosin heavy chain, skeletal muscle, adult-like isoform X1 [KO:K24220]
115616512  myosin heavy chain, skeletal muscle, adult isoform X1 [KO:K24220]
115616513  myosin-1B-like isoform X1 [KO:K24220]
115616514  myosin-1B isoform X1 [KO:K24220]
115616516  myosin heavy chain, skeletal muscle, adult-like isoform X1 [KO:K24220]
115616517  myosin heavy chain, skeletal muscle, adult-like isoform X1 [KO:K24220]
115616521  myosin heavy chain, skeletal muscle, adult-like [KO:K24220]
115601506  MYH15; myosin-15 [KO:K24220]
115615367  MYH7B; myosin-7B [KO:K24220]
115602616  myosin-6 [KO:K17751]
115616479  MYH10; myosin-10 isoform X1 [KO:K10352]
115604913  MYH9; myosin-9 [KO:K10352]
115606818  MYH11; myosin-11 isoform X1 [KO:K10352]
115608239  MYL1; myosin light chain 1/3, skeletal muscle isoform isoform X1 [KO:K05738]
115608520  MYL3; myosin light chain 3 [KO:K12749]
115617910  MYL4; myosin light chain 4 [KO:K12750]
115618723  MYL6; myosin light polypeptide 6 isoform X1 [KO:K12751]
115614657  MYL2; LOW QUALITY PROTEIN: myosin regulatory light chain 2, ventricular/cardiac muscle isoform [KO:K10351]
115615234  MYL9; myosin regulatory light polypeptide 9 [KO:K12755]
115602058  MYL10; myosin regulatory light chain 10 isoform X1 [KO:K12756]
115612260  myosin regulatory light chain 2, smooth muscle minor isoform isoform X1 [KO:K12757]
115612266  myosin regulatory light chain 2, smooth muscle minor isoform [KO:K12757]
115603061  myosin regulatory light chain 2, skeletal muscle isoform [KO:K12758]
115613788  ACTA1; actin, alpha skeletal muscle [KO:K10354]
115608046  ACTA2; actin, aortic smooth muscle [KO:K12313]
115606000  actin, alpha skeletal muscle B-like [KO:K12314]
115606898  ACTC1; actin, alpha cardiac muscle 1 [KO:K12314]
115618475  ACTG2; actin, gamma-enteric smooth muscle [KO:K12315]
115616751  ACTG1; actin, cytoplasmic 2 [KO:K05692]
115612443  actin, cytoplasmic type 5 [KO:K05692]
115606888  ACTB; actin, cytoplasmic 1 [KO:K05692]
115614732  TNNC1; troponin C, slow skeletal and cardiac muscles [KO:K05865]
115602429  TNNI1; troponin I, slow skeletal muscle [KO:K10371]
115615010  TNNC2; troponin C, skeletal muscle [KO:K12042]
115607565  TNNI2; troponin I, fast skeletal muscle isoform X1 [KO:K12043]
115606395  TNNT3; troponin T, fast skeletal muscle [KO:K12046]
115602432  TNNT2; troponin T, cardiac muscle isoform X1 [KO:K12045]
115612575  TPM1; tropomyosin alpha-1 chain isoform X1 [KO:K10373]
115619814  TPM2; tropomyosin beta chain isoform X1 [KO:K09290]
115609501  LOW QUALITY PROTEIN: tropomyosin beta chain-like [KO:K09290]
115602715  TPM3; tropomyosin alpha-3 chain isoform X1 [KO:K09290]
115618351  TPM4; tropomyosin alpha-4 chain isoform X1 [KO:K10375]
Reference
  Authors
Hirokawa N, Niwa S, Tanaka Y
  Title
Molecular motors in neurons: transport mechanisms and roles in brain function, development, and disease.
  Journal
Neuron 68:610-38 (2010)
DOI:10.1016/j.neuron.2010.09.039
Reference
PMID:25470043 (PDB:4RH7)
  Authors
Schmidt H, Zalyte R, Urnavicius L, Carter AP
  Title
Structure of human cytoplasmic dynein-2 primed for its power stroke.
  Journal
Nature 518:435-438 (2015)
DOI:10.1038/nature14023
Reference
PMID:22398446 (PDB:3VKG 3VKH)
  Authors
Kon T, Oyama T, Shimo-Kon R, Imamula K, Shima T, Sutoh K, Kurisu G
  Title
The 2.8 A crystal structure of the dynein motor domain.
  Journal
Nature 484:345-50 (2012)
DOI:10.1038/nature10955
Reference
PMID:22997337 (PDB:3J1T 3J1U)
  Authors
Redwine WB, Hernandez-Lopez R, Zou S, Huang J, Reck-Peterson SL, Leschziner AE
  Title
Structural basis for microtubule binding and release by dynein.
  Journal
Science 337:1532-1536 (2012)
DOI:10.1126/science.1224151
Reference
  Authors
Gibbs KL, Greensmith L, Schiavo G
  Title
Regulation of Axonal Transport by Protein Kinases.
  Journal
Trends Biochem Sci 40:597-610 (2015)
DOI:10.1016/j.tibs.2015.08.003
Reference
PMID:28602352 (PDB:5NUG 5NVS 5NVU 5NW4)
  Authors
Zhang K, Foster HE, Rondelet A, Lacey SE, Bahi-Buisson N, Bird AW, Carter AP
  Title
Cryo-EM Reveals How Human Cytoplasmic Dynein Is Auto-inhibited and Activated.
  Journal
Cell 169:1303-1314.e18 (2017)
DOI:10.1016/j.cell.2017.05.025
Reference
PMID:25814576 (PDB:5ADX 5AFR 5AFU)
  Authors
Urnavicius L, Zhang K, Diamant AG, Motz C, Schlager MA, Yu M, Patel NA, Robinson CV, Carter AP
  Title
The structure of the dynactin complex and its interaction with dynein.
  Journal
Science 347:1441-1446 (2015)
DOI:10.1126/science.aaa4080
Reference
PMID:29420470 (PDB:5OWO 6F1T 6F1U 6F1V 6F1Y 6F1Z 6F38 6F3A)
  Authors
Urnavicius L, Lau CK, Elshenawy MM, Morales-Rios E, Motz C, Yildiz A, Carter AP
  Title
Cryo-EM shows how dynactin recruits two dyneins for faster movement.
  Journal
Nature 554:202-206 (2018)
DOI:10.1038/nature25462
Reference
  Authors
Reck-Peterson SL, Redwine WB, Vale RD, Carter AP
  Title
The cytoplasmic dynein transport machinery and its many cargoes.
  Journal
Nat Rev Mol Cell Biol 19:382-398 (2018)
DOI:10.1038/s41580-018-0004-3
Reference
PMID:23434508 (PDB:3J2U)
  Authors
Asenjo AB, Chatterjee C, Tan D, DePaoli V, Rice WJ, Diaz-Avalos R, Silvestry M, Sosa H
  Title
Structural model for tubulin recognition and deformation by kinesin-13 microtubule depolymerases.
  Journal
Cell Rep 3:759-68 (2013)
DOI:10.1016/j.celrep.2013.01.030
Reference
PMID:10338210 (PDB:1B7T)
  Authors
Houdusse A, Kalabokis VN, Himmel D, Szent-Gyorgyi AG, Cohen C
  Title
Atomic structure of scallop myosin subfragment S1 complexed with MgADP: a novel conformation of the myosin head.
  Journal
Cell 97:459-70 (1999)
DOI:10.1016/s0092-8674(00)80756-4
Reference
PMID:9428521 (PDB:3KIN)
  Authors
Kozielski F, Sack S, Marx A, Thormahlen M, Schonbrunn E, Biou V, Thompson A, Mandelkow EM, Mandelkow E
  Title
The crystal structure of dimeric kinesin and implications for microtubule-dependent motility.
  Journal
Cell 91:985-94 (1997)
DOI:10.1016/s0092-8674(00)80489-4
Reference
PMID:8316857 (PDB:2MYS)
  Authors
Rayment I, Rypniewski WR, Schmidt-Base K, Smith R, Tomchick DR, Benning MM, Winkelmann DA, Wesenberg G, Holden HM
  Title
Three-dimensional structure of myosin subfragment-1: a molecular motor.
  Journal
Science 261:50-8 (1993)
DOI:10.1126/science.8316857
Reference
  Authors
Parker D, Bryant Z, Delp SL
  Title
Coarse-Grained Structural Modeling of Molecular Motors Using Multibody Dynamics.
  Journal
Cell Mol Bioeng 2:366-374 (2009)
DOI:10.1007/s12195-009-0084-4
Reference
  Authors
Dominguez R, Holmes KC
  Title
Actin structure and function.
  Journal
Annu Rev Biophys 40:169-86 (2011)
DOI:10.1146/annurev-biophys-042910-155359
Reference
PMID:31919429 (PDB:6KN7 6KN8)
  Authors
Yamada Y, Namba K, Fujii T
  Title
Cardiac muscle thin filament structures reveal calcium regulatory mechanism.
  Journal
Nat Commun 11:153 (2020)
DOI:10.1038/s41467-019-14008-1
Reference
  Authors
Kruppa AJ, Buss F
  Title
Motor proteins at the mitochondria-cytoskeleton interface.
  Journal
J Cell Sci 134:239092 (2021)
DOI:10.1242/jcs.226084
KO pathway
ko04814   
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