KEGG   PATHWAY: uah04146
Entry
uah04146                    Pathway                                
Name
Peroxisome - Ursus arctos (brown bear)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
uah04146  Peroxisome
uah04146

Other DBs
GO: 0005777
Organism
Ursus arctos (brown bear) [GN:uah]
Gene
113264995  PEX16; peroxisomal biogenesis factor 16 isoform X1 [KO:K13335]
113259510  PEX3; peroxisomal biogenesis factor 3 [KO:K13336]
113246647  PEX19; peroxisomal biogenesis factor 19 isoform X2 [KO:K13337]
113254387  ABCD3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
113259868  PEX1; peroxisomal ATPase PEX1 isoform X1 [KO:K13338]
113261283  PEX6; peroxisome biogenesis factor 6 isoform X1 [KO:K13339]
113258069  PEX26; peroxisome assembly protein 26 isoform X1 [KO:K13340]
113259483  PEX7; peroxisomal biogenesis factor 7 [KO:K13341]
113257939  PEX5; peroxisomal biogenesis factor 5 isoform X2 [KO:K13342]
113254715  PEX5L; PEX5-related protein isoform X3 [KO:K13342]
113270518  PEX14; peroxisomal membrane protein PEX14 isoform X2 [KO:K13343]
113245296  PEX13; peroxisome biogenesis factor 13 [KO:K13344]
113268961  PEX12; peroxisome assembly protein 12 [KO:K13345]
113270605  PEX10; peroxisome biogenesis factor 10 isoform X1 [KO:K13346]
113253032  PEX2; peroxisome biogenesis factor 2 isoform X2 [KO:K06664]
113266838  PXMP2; peroxisomal membrane protein 2 [KO:K13347]
113256709  MPV17L2; mpv17-like protein 2 [KO:K13348]
113271127  MPV17; protein Mpv17 isoform X1 [KO:K13348]
113270766  MPV17L; mpv17-like protein isoform X1 [KO:K13349]
113258499  PXMP4; peroxisomal membrane protein 4 isoform X1 [KO:K13350]
113263693  PEX11A; peroxisomal membrane protein 11A [KO:K13351]
113247762  PEX11B; peroxisomal membrane protein 11B [KO:K13352]
113242941  PEX11G; peroxisomal membrane protein 11C [KO:K13353]
113241745  SLC25A17; peroxisomal membrane protein PMP34 isoform X1 [KO:K13354]
113253912  HACL1; 2-hydroxyacyl-CoA lyase 1 [KO:K12261] [EC:4.1.2.63]
113260868  AMACR; alpha-methylacyl-CoA racemase isoform X1 [KO:K01796] [EC:5.1.99.4]
113244611  ACOX1; peroxisomal acyl-coenzyme A oxidase 1 isoform X2 [KO:K00232] [EC:1.3.3.6]
113245696  ACOX3; peroxisomal acyl-coenzyme A oxidase 3 isoform X1 [KO:K00232] [EC:1.3.3.6]
113257024  ACOX2; peroxisomal acyl-coenzyme A oxidase 2 isoform X3 [KO:K10214] [EC:1.17.99.3]
113261629  HSD17B4; peroxisomal multifunctional enzyme type 2 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
113254655  SCP2; sterol carrier protein 2 [KO:K08764] [EC:2.3.1.176]
113260385  acyl-coenzyme A amino acid N-acyltransferase 2-like [KO:K00659] [EC:2.3.1.65 3.1.2.2]
113260386  LOW QUALITY PROTEIN: bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
113254101  EHHADH; peroxisomal bifunctional enzyme isoform X1 [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
113253780  ACAA1; 3-ketoacyl-CoA thiolase, peroxisomal [KO:K07513] [EC:2.3.1.16]
113245374  DECR2; peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] isoform X1 [KO:K13237] [EC:1.3.1.124]
113243607  ECH1; delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
113257735  ABCD2; ATP-binding cassette sub-family D member 2 [KO:K05676] [EC:7.6.2.4]
113270339  ABCD4; lysosomal cobalamin transporter ABCD4 isoform X1 [KO:K05678] [EC:7.6.2.8]
113262264  ACSL1; long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
113241237  ACSL4; long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
113251936  ACSL5; long-chain-fatty-acid--CoA ligase 5 [KO:K01897] [EC:6.2.1.3]
113261700  ACSL6; long-chain-fatty-acid--CoA ligase 6 [KO:K01897] [EC:6.2.1.3]
113250403  ACSL3; fatty acid CoA ligase Acsl3 [KO:K01897] [EC:6.2.1.3]
113250487  PECR; peroxisomal trans-2-enoyl-CoA reductase [KO:K07753] [EC:1.3.1.38]
113264409  ECI2; enoyl-CoA delta isomerase 2 isoform X3 [KO:K13239] [EC:5.3.3.8]
113252514  NUDT7; peroxisomal coenzyme A diphosphatase NUDT7 isoform X2 [KO:K17879] [EC:3.6.1.77]
113255022  NUDT12; NAD-capped RNA hydrolase NUDT12 isoform X1 [KO:K03426] [EC:3.6.1.22]
113259171  NUDT13; NAD(P)H pyrophosphatase NUDT13, mitochondrial isoform X1 [KO:K03426] [EC:3.6.1.22]
113244719  NUDT19; acyl-coenzyme A diphosphatase NUDT19 [KO:K13355] [EC:3.6.1.77]
113258662  ACOT8; acyl-coenzyme A thioesterase 8 isoform X1 [KO:K11992] [EC:3.1.2.27]
113266498  CRAT; carnitine O-acetyltransferase isoform X2 [KO:K00624] [EC:2.3.1.7]
113259454  CROT; peroxisomal carnitine O-octanoyltransferase isoform X1 [KO:K05940] [EC:2.3.1.137]
113252546  MLYCD; malonyl-CoA decarboxylase, mitochondrial isoform X1 [KO:K01578] [EC:4.1.1.9]
113259036  dihydroxyacetone phosphate acyltransferase isoform X1 [KO:K00649] [EC:2.3.1.42]
130542999  GNPAT; dihydroxyacetone phosphate acyltransferase isoform X1 [KO:K00649] [EC:2.3.1.42]
113250728  AGPS; alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X1 [KO:K00803] [EC:2.5.1.26]
113257761  FAR2; fatty acyl-CoA reductase 2 isoform X2 [KO:K13356] [EC:1.2.1.84]
113246250  FAR1; fatty acyl-CoA reductase 1 isoform X4 [KO:K13356] [EC:1.2.1.84]
113267089  MVK; mevalonate kinase isoform X2 [KO:K00869] [EC:2.7.1.36]
113245301  PMVK; phosphomevalonate kinase isoform X1 [KO:K13273] [EC:2.7.4.2]
113249581  AGXT; alanine--glyoxylate aminotransferase isoform X2 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
113267077  DAO; D-amino-acid oxidase isoform X1 [KO:K00273] [EC:1.4.3.3]
113264740  DDO; D-aspartate oxidase isoform X1 [KO:K00272] [EC:1.4.3.1]
113250517  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
113252100  PAOX; peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 [KO:K00308] [EC:1.5.3.13]
113269058  PIPOX; peroxisomal sarcosine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
113268515  HMGCL; hydroxymethylglutaryl-CoA lyase, mitochondrial [KO:K01640] [EC:4.1.3.4]
113261167  HMGCLL1; 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1 [KO:K01640] [EC:4.1.3.4]
113244363  HAO2; 2-Hydroxyacid oxidase 2 [KO:K11517] [EC:1.1.3.15]
113258349  HAO1; 2-Hydroxyacid oxidase 1 isoform X2 [KO:K11517] [EC:1.1.3.15]
113265048  CAT; catalase isoform X2 [KO:K03781] [EC:1.11.1.6]
113244172  PRDX5; peroxiredoxin-5, mitochondrial isoform X1 [KO:K11187] [EC:1.11.1.24]
113266578  SOD1; superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
113259615  SOD2; superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
113269018  NOS2; nitric oxide synthase, inducible [KO:K13241] [EC:1.14.13.39]
113254744  PRDX1; peroxiredoxin-1 [KO:K13279] [EC:1.11.1.24]
113269956  EPHX2; bifunctional epoxide hydrolase 2 isoform X1 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
113265493  GSTK1; glutathione S-transferase kappa 1 isoform X2 [KO:K13299] [EC:2.5.1.18]
113240940  XDH; xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
113246025  dehydrogenase/reductase SDR family member 4 isoform X2 [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
uah00071  Fatty acid degradation
uah00120  Primary bile acid biosynthesis
uah00230  Purine metabolism
uah00564  Glycerophospholipid metabolism
uah00565  Ether lipid metabolism
uah00830  Retinol metabolism
uah00900  Terpenoid backbone biosynthesis
uah03320  PPAR signaling pathway
KO pathway
ko04146   
LinkDB

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