KEGG   PATHWAY: xen00230
Entry
xen00230                    Pathway                                
Name
Purine metabolism - Xenia sp. Carnegie-2017 (soft corals)
Class
Metabolism; Nucleotide metabolism
Pathway map
xen00230  Purine metabolism
xen00230

Module
xen_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:xen00230]
xen_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xen00230]
xen_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xen00230]
xen_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xen00230]
xen_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xen00230]
xen_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:xen00230]
Other DBs
GO: 0006163 0042278
Organism
Xenia sp. Carnegie-2017 (soft corals) [GN:xen]
Gene
124434403  ADP-ribose pyrophosphatase, mitochondrial-like [KO:K13988] [EC:3.6.1.13]
124440094  phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
124445386  glucose 1,6-bisphosphate synthase-like [KO:K15779] [EC:5.4.2.2 5.4.2.7]
124446721  ribose-phosphate pyrophosphokinase 2-like [KO:K00948] [EC:2.7.6.1]
124446602  amidophosphoribosyltransferase-like [KO:K00764] [EC:2.4.2.14]
124443189  LOW QUALITY PROTEIN: trifunctional purine biosynthetic protein adenosine-3-like [KO:K11787] [EC:6.3.4.13 2.1.2.2 6.3.3.1]
124445323  LOW QUALITY PROTEIN: phosphoribosylformylglycinamidine synthase-like [KO:K01952] [EC:6.3.5.3]
124446730  multifunctional protein ADE2-like isoform X1 [KO:K01587] [EC:4.1.1.21 6.3.2.6]
124447873  adenylosuccinate lyase-like isoform X1 [KO:K01756] [EC:4.3.2.2]
124440067  bifunctional purine biosynthesis protein ATIC-like [KO:K00602] [EC:2.1.2.3 3.5.4.10]
124436765  adenine phosphoribosyltransferase-like [KO:K00759] [EC:2.4.2.7]
124436868  mannosylglucosyl-3-phosphoglycerate phosphatase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
124443983  cytosolic purine 5'-nucleotidase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
124441799  LOW QUALITY PROTEIN: 5'-nucleotidase-like [KO:K19970] [EC:3.1.3.5]
124435814  purine nucleoside phosphorylase-like [KO:K03783] [EC:2.4.2.1]
124440625  hypoxanthine-guanine phosphoribosyltransferase-like [KO:K00760] [EC:2.4.2.8]
124445373  inosine-5'-monophosphate dehydrogenase 1-like [KO:K00088] [EC:1.1.1.205]
124445866  nucleoside diphosphate kinase A-like isoform X1 [KO:K00940] [EC:2.7.4.6]
124437122  uncharacterized protein LOC124437122 [KO:K00940] [EC:2.7.4.6]
124446675  LOW QUALITY PROTEIN: nucleoside diphosphate kinase-like [KO:K00940] [EC:2.7.4.6]
124447386  nucleoside diphosphate kinase 7-like [KO:K00940] [EC:2.7.4.6]
124450892  nucleoside diphosphate kinase 6-like [KO:K00940] [EC:2.7.4.6]
124451598  nucleoside diphosphate kinase 6-like isoform X1 [KO:K00940] [EC:2.7.4.6]
124451599  nucleoside diphosphate kinase 6-like [KO:K00940] [EC:2.7.4.6]
124442482  adenylate kinase 9-like [KO:K18533] [EC:2.7.4.3 2.7.4.6]
124444543  ectonucleoside triphosphate diphosphohydrolase 8-like [KO:K01510] [EC:3.6.1.5]
124448475  LOW QUALITY PROTEIN: soluble calcium-activated nucleotidase 1-like [KO:K12304] [EC:3.6.1.6]
124444705  ectonucleoside triphosphate diphosphohydrolase 4-like [KO:K12305] [EC:3.6.1.6]
124452774  ectonucleoside triphosphate diphosphohydrolase 6-like [KO:K01511] [EC:3.6.1.6]
124447167  U8 snoRNA-decapping enzyme-like [KO:K16855] [EC:3.6.1.62 3.6.1.64]
124439141  inosine triphosphate pyrophosphatase-like [KO:K01519] [EC:3.6.1.66]
124443144  xanthine dehydrogenase/oxidase-like isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
124443928  GMP synthase [glutamine-hydrolyzing]-like [KO:K01951] [EC:6.3.5.2]
124437851  GMP reductase 2-like [KO:K00364] [EC:1.7.1.7]
124453211  guanylate kinase-like [KO:K00942] [EC:2.7.4.8]
124445975  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
124440785  LOW QUALITY PROTEIN: ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
124443692  ribonucleoside-diphosphate reductase subunit M2 B-like [KO:K10808] [EC:1.17.4.1]
124452321  5'-deoxynucleotidase HDDC2-like [KO:K07023] [EC:3.1.3.89]
124444290  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1-like [KO:K21138] [EC:3.1.7.2]
124444292  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1-like [KO:K21138] [EC:3.1.7.2]
124433348  adenylate cyclase type 3-like [KO:K08043] [EC:4.6.1.1]
124439835  adenylate cyclase type 5-like [KO:K08046] [EC:4.6.1.1]
124445488  adenylate cyclase type 9-like [KO:K08049] [EC:4.6.1.1]
124446905  guanylate cyclase soluble subunit alpha-2-like [KO:K12318] [EC:4.6.1.2]
124445791  guanylate cyclase soluble subunit beta-1-like [KO:K12319] [EC:4.6.1.2]
124447897  speract receptor-like isoform X1 [KO:K01769] [EC:4.6.1.2]
124453184  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A-like isoform X1 [KO:K13755] [EC:3.1.4.17]
124447188  cGMP-dependent 3',5'-cyclic phosphodiesterase-like isoform X1 [KO:K18283] [EC:3.1.4.17]
124438326  cGMP-inhibited 3',5'-cyclic phosphodiesterase A-like [KO:K19021] [EC:3.1.4.17]
124441920  cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A-like [KO:K18438] [EC:3.1.4.17 3.1.4.35]
124453137  probable 3',5'-cyclic phosphodiesterase pde-5 [KO:K18438] [EC:3.1.4.17 3.1.4.35]
124445887  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like isoform X1 [KO:K13298] [EC:3.1.4.17 3.1.4.35]
124439677  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like isoform X1 [KO:K13298] [EC:3.1.4.17 3.1.4.35]
124442418  adenylosuccinate synthetase isozyme 1-like [KO:K01939] [EC:6.3.4.4]
124445763  AMP deaminase 2-like isoform X1 [KO:K01490] [EC:3.5.4.6]
124438443  adenosine kinase-like [KO:K00856] [EC:2.7.1.20]
124458859  adenosine deaminase-like isoform X1 [KO:K01488] [EC:3.5.4.4]
124438717  adenylate kinase 8-like [KO:K00939] [EC:2.7.4.3]
124448905  adenylate kinase-like isoform X1 [KO:K00939] [EC:2.7.4.3]
124443414  adenylate kinase 7-like [KO:K00939] [EC:2.7.4.3]
124457146  adenylate kinase isoenzyme 6-like [KO:K18532] [EC:2.7.4.3]
124437833  GTP:AMP phosphotransferase AK3, mitochondrial-like [KO:K00944] [EC:2.7.4.10]
124439606  venom phosphodiesterase 2-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124441470  cAMP-specific 3',5'-cyclic phosphodiesterase 4C-like isoform X1 [KO:K13293] [EC:3.1.4.53]
124433419  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A-like isoform X1 [KO:K18437] [EC:3.1.4.53]
124435295  bis(5'-adenosyl)-triphosphatase-like [KO:K01522] [EC:3.6.1.29]
124453012  bis(5'-adenosyl)-triphosphatase ENPP4-like [KO:K18424] [EC:3.6.1.29]
124452721  LOW QUALITY PROTEIN: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
xen00030  Pentose phosphate pathway
xen00220  Arginine biosynthesis
xen00250  Alanine, aspartate and glutamate metabolism
xen00260  Glycine, serine and threonine metabolism
xen00340  Histidine metabolism
xen00630  Glyoxylate and dicarboxylate metabolism
xen00730  Thiamine metabolism
xen00740  Riboflavin metabolism
xen00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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