SSDB Best Search Result

Entry:nal:B005_3125 (304 a.a.)
Name:DNA polymerase LigD, polymerase domain protein
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 92 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
sco:SCO6498 conserved hypothetical protein SC1E6.07     K01971     319      765     0.511      262     
sgu:SGLAU_27360 DNA polymerase LigD, polymerase domain- K01971     308      749     0.444      304     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      635     0.380      297     
pde:Pden_4186 conserved hypothetical protein            K01971     330      630     0.413      269     
amd:AMED_5203 ATP-dependent DNA ligase                  K01971     287      624     0.401      284     
swi:Swit_3982 DNA ligase D                              K01971     837      620     0.390      264     
ssy:SLG_04290 putative DNA ligase                       K01971     835      615     0.389      262     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930      614     0.368      269     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      614     0.410      266     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      609     0.364      308     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      609     0.407      263     
sct:SCAT_5514 conserved protein of unknown function                335      595     0.387      266     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      590     0.384      258     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      590     0.391      258     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      585     0.367      267     
sro:Sros_6714 DNA primase small subunit                            334      578     0.358      307     
mta:Moth_2082 conserved hypothetical protein            K01971     306      575     0.362      268     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      575     0.378      283     
ret:RHE_CH00617 putative DNA ligase protein             K01971     659      571     0.370      262     
sen:SACE_3394 ATP-dependent DNA ligase                             292      567     0.377      281     
scl:sce3523 unnamed protein product; High confidence in K01971     762      563     0.403      258     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      557     0.350      257     
ccyc:SCMU_06830 hypothetical protein                               727      556     0.369      306     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      554     0.385      260     
dsy:DSY0616 hypothetical protein                        K01971     818      550     0.356      275     
sno:Snov_0819 DNA ligase D                              K01971     842      548     0.353      258     
mab:MAB_0280 Conserved hypothetical protein                        306      547     0.391      281     
cpy:Cphy_1729 DNA ligase D                              K01971     813      543     0.372      250     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      543     0.375      267     
mul:MUL_4339 conserved hypothetical protein                        346      542     0.376      311     
mmi:MMAR_5265 conserved hypothetical protein                       346      541     0.377      310     
mva:Mvan_5542 conserved hypothetical protein                       349      541     0.362      309     
sml:Smlt2530 putative DNA ligase family protein         K01971     849      540     0.352      281     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      535     0.364      258     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      527     0.366      265     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      524     0.357      258     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      524     0.357      255     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      523     0.357      249     
mtu:Rv3730c hypothetical protein                                   346      523     0.377      300     
mtc:MT3835 conserved hypothetical protein                          346      523     0.377      300     
ase:ACPL_519 DNA ligase (ATP)                           K01971     301      522     0.367      270     
msm:MSMEG_6301 DNA polymerase LigD, polymerase domain              350      521     0.356      312     
phe:Phep_1702 DNA ligase D                              K01971     877      514     0.325      265     
nfa:NFA_25590 hypothetical protein                                 333      513     0.357      258     
sma:SAVERM_1696 putative DNA primase, small subunit                338      513     0.349      312     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      510     0.342      272     
nca:Noca_2445 putative DNA ligase (ATP), C-terminal                326      508     0.354      268     
sgr:SGR_1023 conserved hypothetical protein                        345      504     0.350      263     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      500     0.336      256     
rpa:TX73_018915 DNA ligase D                            K01971     914      498     0.344      262     
chy:CHY_0025 conserved hypothetical protein             K01971     293      491     0.351      259     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      489     0.352      264     
gpo:GPOL_c30660 DNA polymerase LigD                                318      487     0.345      264     
xau:Xaut_4365 DNA ligase D                              K01971     886      486     0.343      277     
kfl:Kfla_5287 DNA polymerase LigD, polymerase domain pr            335      484     0.333      267     
rle:pRL120229 putative DNA ligase family protein        K01971     881      484     0.339      274     
stp:Strop_1543 DNA primase, small subunit                          341      478     0.337      255     
ppu:PP_3260 DNA ligase D                                K01971     833      477     0.336      256     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      466     0.343      265     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      463     0.321      277     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      459     0.271      284     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      450     0.312      282     
oih:OB3034 hypothetical conserved protein               K01971     595      447     0.291      289     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      443     0.293      276     
ksk:KSE_05320 hypothetical protein                      K01971     173      408     0.480      175     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      377     0.291      244     
dvu:DVU_0748 acetyl-CoA synthetase                      K01895     648      134     0.250      260     
mgr:MGG_08686 hypothetical protein                                 721      131     0.255      231     
vvi:100267490 pyruvate, phosphate dikinase regulatory p K20115     424      129     0.253      281     
ptr:465200 DNA-(apurinic or apyrimidinic site) endonucl K10771     318      129     0.249      261     
sly:138348428 uncharacterized protein                              954      128     0.255      302     
hsa:328 DNA repair nuclease/redox regulator APEX1       K10771     318      127     0.249      261     
dds:Ddes_0136 thiamine pyrophosphate protein domain pro K00175     283      127     0.359      92      
vg:55613026 Mycobacterium phage DrLupo; helicase        K26929     654      126     0.244      242     
fca:101090569 carbohydrate sulfotransferase 8           K09672     425      126     0.307      127     
oas:101102580 vacuolar protein sorting-associated prote K20180     839      121     0.233      287     
bmor:101745774 L-2-hydroxyglutarate dehydrogenase, mito K00109     446      121     0.232      164     
bta:505361 vacuolar protein sorting-associated protein  K20180     839      121     0.233      287     
xla:108711230 scm-like with four MBT domains protein 2  K26269     909      120     0.209      296     
tcr:507765.40 hypothetical protein                                 414      119     0.231      173     
dme:Dmel_CG11909 target of brain insulin                K24727     657      118     0.251      187     
tth:TT_C1296 5-methylcytosine-specific restriction enzy            170      117     0.300      150     
smm:Smp_074410 hypothetical protein                     K24229     290      116     0.237      160     
cjc:100400557 DNA-(apurinic or apyrimidinic site) endon K10771     318      115     0.242      256     
mcc:702757 DNA-(apurinic or apyrimidinic site) lyase    K10771     318      113     0.238      261     
nta:107785689 pentatricopeptide repeat-containing prote            737      110     0.403      67      
nmr:Nmar_0449 ribosomal protein L16                     K02866     169      110     0.253      95      
gmx:102664618 uncharacterized protein LOC102664618                 584      109     0.233      206     
ana:alr4852 hypothetical protein                                   213      108     0.246      114     
smo:SELMODRAFT_419730 hypothetical protein                         236      104     0.269      78      
cel:CELE_M110.3 E3 ubiquitin-protein ligase MARCHF5                189       97     0.255      141     
eca:ECA1484 conserved hypothetical protein                          92       92     0.339      59      

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