KEGG   PATHWAY: acep03040
Entry
acep03040                   Pathway                                
Name
Spliceosome - Atta cephalotes (leaf cutting ant)
Description
After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.
Class
Genetic Information Processing; Transcription
Pathway map
acep03040  Spliceosome
acep03040

Other DBs
GO: 0005681
Organism
Atta cephalotes (leaf cutting ant) [GN:acep]
Gene
105617100  [KO:K12835] [EC:3.6.4.13]
105617119  [KO:K12864]
105617399  [KO:K12839]
105617456  [KO:K12812] [EC:3.6.4.13]
105617675  [KO:K12623]
105617757  [KO:K11087]
105617788  [KO:K12886]
105617816  [KO:K12890]
105618035  [KO:K12849]
105618318  [KO:K09567] [EC:5.2.1.8]
105618345  [KO:K12874]
105618363  [KO:K12862]
105618507  [KO:K12820] [EC:3.6.4.13]
105618651  [KO:K12824]
105618789  [KO:K12662]
105618808  [KO:K12818] [EC:3.6.4.13]
105618855  [KO:K12896]
105618989  [KO:K12622]
105618992  [KO:K12869]
105619113  [KO:K12892]
105619132  [KO:K11097]
105619364  [KO:K12837]
105619424  [KO:K12852]
105619494  [KO:K12816]
105619502  [KO:K11095]
105619537  [KO:K12827]
105619827  [KO:K12871]
105619858  [KO:K12832]
105619859  [KO:K12621]
105619970  [KO:K12821]
105619998  [KO:K12842]
105620074  [KO:K12857]
105620186  [KO:K09564] [EC:5.2.1.8]
105620343  [KO:K11088]
105620462  [KO:K12879]
105620498  [KO:K12861]
105620503  [KO:K12829]
105620506  [KO:K13025] [EC:3.6.4.13]
105620707  [KO:K11096]
105620740  [KO:K11984]
105620755  [KO:K12626]
105620772  [KO:K12854] [EC:3.6.4.13]
105620932  [KO:K12875]
105620997  [KO:K11098]
105621081  [KO:K12836]
105621157  [KO:K12834]
105621418  [KO:K12624]
105621548  [KO:K12891]
105621559  [KO:K12825]
105621607  [KO:K12863]
105621762  [KO:K12845]
105621764  [KO:K12830]
105621862  [KO:K12741]
105621865  [KO:K12844]
105621922  [KO:K12870]
105621937  [KO:K12855]
105622019  [KO:K12840]
105622021  [KO:K11094]
105622063  [KO:K12846]
105622167  [KO:K11092]
105622349  [KO:K12733] [EC:5.2.1.8]
105622468  [KO:K12866]
105622645  [KO:K12881]
105622690  [KO:K12882]
105622737  [KO:K12883]
105623029  [KO:K12815] [EC:3.6.4.13]
105623062  [KO:K12877]
105623194  [KO:K12822]
105623390  [KO:K12847]
105623710  [KO:K12817]
105623771  [KO:K12872]
105623850  [KO:K12841]
105623878  [KO:K11093]
105623889  [KO:K12856]
105624101  [KO:K12625]
105624105  [KO:K12865]
105624282  [KO:K12873]
105624347  [KO:K12819]
105624400  [KO:K12833]
105624500  [KO:K12848]
105624599  [KO:K12850]
105624613  [KO:K12859]
105624645  [KO:K11086]
105624655  [KO:K10599] [EC:2.3.2.27]
105624697  [KO:K12880]
105624704  [KO:K06063]
105624818  [KO:K12627]
105624914  [KO:K12838]
105625132  [KO:K12867]
105625168  [KO:K12831]
105625552  [KO:K13098]
105625664  [KO:K12858] [EC:3.6.4.13]
105625915  [KO:K12836]
105625925  [KO:K12843]
105626699  [KO:K12828]
105626745  [KO:K03283]
105626924  [KO:K12876]
105626935  [KO:K12823] [EC:3.6.4.13]
105626999  [KO:K12823] [EC:3.6.4.13]
105627126  [KO:K03283]
105627158  [KO:K12826]
105627322  [KO:K12897]
105627456  [KO:K12878]
105627501  [KO:K12868]
105627513  [KO:K12811] [EC:3.6.4.13]
105627678  [KO:K11099]
105627893  [KO:K12860]
105627920  [KO:K12893]
105627929  [KO:K12813] [EC:3.6.4.13]
Reference
  Authors
Wahl MC, Will CL, Luhrmann R
  Title
The spliceosome: design principles of a dynamic RNP machine.
  Journal
Cell 136:701-18 (2009)
DOI:10.1016/j.cell.2009.02.009
Reference
  Authors
Morris DP, Greenleaf AL
  Title
The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II.
  Journal
J Biol Chem 275:39935-43 (2000)
DOI:10.1074/jbc.M004118200
Reference
  Authors
Chen YI, Moore RE, Ge HY, Young MK, Lee TD, Stevens SW
  Title
Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors.
  Journal
Nucleic Acids Res 35:3928-44 (2007)
DOI:10.1093/nar/gkm347
Reference
  Authors
Ritchie DB, Schellenberg MJ, MacMillan AM
  Title
Spliceosome structure: piece by piece.
  Journal
Biochim Biophys Acta 1789:624-33 (2009)
DOI:10.1016/j.bbagrm.2009.08.010
KO pathway
ko03040   

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