KEGG   PATHWAY: otw00513
Entry
otw00513                    Pathway                                
Name
Various types of N-glycan biosynthesis - Oncorhynchus tshawytscha (Chinook salmon)
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
otw00513  Various types of N-glycan biosynthesis
otw00513

Module
otw_M00072  N-glycosylation by oligosaccharyltransferase [PATH:otw00513]
Other DBs
GO: 0006487
Organism
Oncorhynchus tshawytscha (Chinook salmon) [GN:otw]
Gene
112214463  man2a1; alpha-mannosidase 2 isoform X1 [KO:K01231] [EC:3.2.1.114]
112214481  [KO:K26501]
112216768  alg12; dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase [KO:K03847] [EC:2.4.1.260]
112217585  [KO:K01230] [EC:3.2.1.113]
112217651  [KO:K00736] [EC:2.4.1.143]
112217850  [KO:K00736] [EC:2.4.1.143]
112218868  mgat4c; alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C [KO:K13748] [EC:2.4.1.201 2.4.1.145]
112218964  hexa; beta-hexosaminidase subunit alpha [KO:K12373] [EC:3.2.1.52]
112218977  b4galnt3b; beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1 [KO:K09656] [EC:2.4.1.244]
112218991  [KO:K01231] [EC:3.2.1.114]
112219144  [KO:K09672] [EC:2.8.2.-]
112219151  [KO:K13748] [EC:2.4.1.201 2.4.1.145]
112219203  b4galnt4a; N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 [KO:K09657] [EC:2.4.1.244]
112219395  [KO:K12666]
112220198  [KO:K12373] [EC:3.2.1.52]
112220520  [KO:K12667]
112220929  [KO:K00738] [EC:2.4.1.145]
112220987  [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
112221032  [KO:K00738] [EC:2.4.1.145]
112221479  [KO:K13748] [EC:2.4.1.201 2.4.1.145]
112221698  tmem258; transmembrane protein 258 [KO:K26502]
112222014  ddost; dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [KO:K12670]
112223054  [KO:K01230] [EC:3.2.1.113]
112224336  hexdc; hexosaminidase D isoform X1 [KO:K14459] [EC:3.2.1.52]
112225363  [KO:K00738] [EC:2.4.1.145]
112225470  [KO:K01230] [EC:3.2.1.113]
112226542  alg3; dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase isoform X1 [KO:K03845] [EC:2.4.1.258]
112226941  b4galt2; beta-1,4-galactosyltransferase 2 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
112227085  st3gal3b; CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1 [KO:K00781] [EC:2.4.3.6]
112227619  alg14; UDP-N-acetylglucosamine transferase subunit ALG14 homolog [KO:K07441] [EC:2.4.1.141]
112228222  alg9; alpha-1,2-mannosyltransferase ALG9 isoform X1 [KO:K03846] [EC:2.4.1.259 2.4.1.261]
112229055  alg13; putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X1 [KO:K07432] [EC:2.4.1.141]
112229406  [KO:K00726] [EC:2.4.1.101]
112229547  [KO:K01230] [EC:3.2.1.113]
112229713  b4galt3; beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
112229967  [KO:K07151] [EC:2.4.99.18]
112230385  si:dkey-199f5.8; beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
112230905  hexb; beta-hexosaminidase subunit beta isoform X1 [KO:K12373] [EC:3.2.1.52]
112230941  mgat1a; alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase a [KO:K00726] [EC:2.4.1.101]
112231032  [KO:K12668]
112231086  [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
112231139  [KO:K07432] [EC:2.4.1.141]
112231477  [KO:K01230] [EC:3.2.1.113]
112231601  [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
112231848  [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
112232571  [KO:K12670]
112232797  [KO:K23741]
112234451  man1b1a; endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase [KO:K23741]
112236228  [KO:K19478]
112237275  [KO:K00717] [EC:2.4.1.68]
112237579  [KO:K19478]
112237744  [KO:K28202]
112238483  tusc3; tumor suppressor candidate 3 isoform X1 [KO:K19478]
112238983  zgc:113333; beta-N-acetylhexosaminidase [KO:K14459] [EC:3.2.1.52]
112239598  [KO:K03844] [EC:2.4.1.131]
112240312  [KO:K03842] [EC:2.4.1.142]
112240345  alg2; alpha-1,3/1,6-mannosyltransferase ALG2 [KO:K03843] [EC:2.4.1.132 2.4.1.257]
112240759  [KO:K01230] [EC:3.2.1.113]
112241015  [KO:K28202]
112241703  ost4; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 [KO:K00730]
112242142  [KO:K00738] [EC:2.4.1.145]
112245005  [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
112245091  [KO:K07151] [EC:2.4.99.18]
112246643  [KO:K00781] [EC:2.4.3.6]
112249323  [KO:K09672] [EC:2.8.2.-]
112250144  [KO:K01230] [EC:3.2.1.113]
112250375  [KO:K00736] [EC:2.4.1.143]
112250474  [KO:K00717] [EC:2.4.1.68]
112250545  [KO:K00736] [EC:2.4.1.143]
112251285  [KO:K00781] [EC:2.4.3.6]
112251819  [KO:K12668]
112252461  [KO:K09656] [EC:2.4.1.244]
112252518  [KO:K01231] [EC:3.2.1.114]
112252638  [KO:K09672] [EC:2.8.2.-]
112252660  [KO:K13748] [EC:2.4.1.201 2.4.1.145]
112253389  [KO:K13748] [EC:2.4.1.201 2.4.1.145]
112253922  alg11; GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase isoform X1 [KO:K03844] [EC:2.4.1.131]
112254335  rpn2; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1 [KO:K12667]
112254415  [KO:K12666]
112255688  [KO:K00738] [EC:2.4.1.145]
112256222  zgc:92907; UDP-N-acetylglucosamine transferase subunit ALG13 homolog isoform X1 [KO:K07432] [EC:2.4.1.141]
112256274  [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
112256317  mgat4b; alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [KO:K00738] [EC:2.4.1.145]
112256877  fut8a; alpha-(1,6)-fucosyltransferase [KO:K00717] [EC:2.4.1.68]
112257442  [KO:K01231] [EC:3.2.1.114]
112257821  [KO:K07151] [EC:2.4.99.18]
112260123  [KO:K26501]
112260287  [KO:K00781] [EC:2.4.3.6]
112260467  [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
112260872  [KO:K03845] [EC:2.4.1.258]
112262442  [KO:K00717] [EC:2.4.1.68]
112263106  [KO:K23741]
112263149  [KO:K26502]
112264307  mgat1b; alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b [KO:K00726] [EC:2.4.1.101]
112264982  [KO:K07151] [EC:2.4.99.18]
121839580  [KO:K03842] [EC:2.4.1.142]
121843941  [KO:K07151] [EC:2.4.99.18]
Compound
G00011  
G00012  
G00013  
G00014  
G00015  
G00016  Core fucose
G00017  
G00179  
G01813  
G05477  
G10665  
G10694  
G10716  
G10770  
G10841  
G10920  
G11000  
G11040  
G11933  
G12617  
G12625  
G12626  
G13047  
G13048  
G13049  
G13050  
G13055  
G13056  
G13057  
G13058  
G13059  
Reference
PMID:11412862
  Authors
Munro S.
  Title
What can yeast tell us about N-linked glycosylation in the Golgi apparatus?
  Journal
FEBS Lett 498:223-7 (2001)
DOI:10.1016/S0014-5793(01)02488-7
Reference
PMID:9878803
  Authors
Dean N.
  Title
Asparagine-linked glycosylation in the yeast Golgi.
  Journal
Biochim Biophys Acta 1426:309-22 (1999)
DOI:10.1016/S0304-4165(98)00132-9
Reference
PMID:9878780
  Authors
Herscovics A.
  Title
Processing glycosidases of Saccharomyces cerevisiae.
  Journal
Biochim Biophys Acta 1426:275-85 (1999)
DOI:10.1016/S0304-4165(98)00129-9
Reference
PMID:9218445
  Authors
Wang XH, Nakayama K, Shimma Y, Tanaka A, Jigami Y.
  Title
MNN6, a member of the KRE2/MNT1 family, is the gene for mannosylphosphate transfer in Saccharomyces cerevisiae.
  Journal
J Biol Chem 272:18117-24 (1997)
DOI:10.1074/jbc.272.29.18117
Reference
PMID:9756928
  Authors
Rayner JC, Munro S.
  Title
Identification of the MNN2 and MNN5 mannosyltransferases required for forming and extending the mannose branches of the outer chain mannans of Saccharomyces cerevisiae.
  Journal
J Biol Chem 273:26836-43 (1998)
DOI:10.1074/jbc.273.41.26836
Reference
PMID:10037752
  Authors
Jungmann J, Rayner JC, Munro S.
  Title
The Saccharomyces cerevisiae protein Mnn10p/Bed1p is a subunit of a Golgi mannosyltransferase complex.
  Journal
J Biol Chem 274:6579-85 (1999)
DOI:10.1074/jbc.274.10.6579
Reference
PMID:8253757
  Authors
Nakanishi-Shindo Y, Nakayama K, Tanaka A, Toda Y, Jigami Y.
  Title
Structure of the N-linked oligosaccharides that show the complete loss of alpha-1,6-polymannose outer chain from och1, och1 mnn1, and och1 mnn1 alg3 mutants of Saccharomyces cerevisiae.
  Journal
J Biol Chem 268:26338-45 (1993)
Reference
PMID:20233335
  Authors
Gomord V, Fitchette AC, Menu-Bouaouiche L, Saint-Jore-Dupas C, Plasson C, Michaud D, Faye L
  Title
Plant-specific glycosylation patterns in the context of therapeutic protein production.
  Journal
Plant Biotechnol J 8:564-87 (2010)
DOI:10.1111/j.1467-7652.2009.00497.x
Related
pathway
otw00510  N-Glycan biosynthesis
KO pathway
ko00513   

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