KEGG   PATHWAY: rtp00513
Entry
rtp00513                    Pathway                                
Name
Various types of N-glycan biosynthesis - Rhincodon typus (whale shark)
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
rtp00513  Various types of N-glycan biosynthesis
rtp00513

Other DBs
GO: 0006487
Organism
Rhincodon typus (whale shark) [GN:rtp]
Gene
109927181  alg13; putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 [KO:K07432] [EC:2.4.1.141]
109919739  alg14; UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform X1 [KO:K07441] [EC:2.4.1.141]
109914501  alg1; chitobiosyldiphosphodolichol beta-mannosyltransferase [KO:K03842] [EC:2.4.1.142]
125485321  alg2; alpha-1,3/1,6-mannosyltransferase ALG2 [KO:K03843] [EC:2.4.1.132 2.4.1.257]
109932447  alg11; GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [KO:K03844] [EC:2.4.1.131]
109916296  alg3; dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [KO:K03845] [EC:2.4.1.258]
109931078  alg9; alpha-1,2-mannosyltransferase ALG9 isoform X1 [KO:K03846] [EC:2.4.1.259 2.4.1.261]
109915320  alg12; dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1 [KO:K03847] [EC:2.4.1.260]
109924687  stt3b; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [KO:K07151] [EC:2.4.99.18]
109916501  stt3a; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A [KO:K07151] [EC:2.4.99.18]
109917919  rpn1; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [KO:K12666]
109923240  rpn2; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1 [KO:K12667]
109934151  dad1; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [KO:K12668]
109927778  ddost; dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [KO:K12670]
109911320  magnesium transporter protein 1-like [KO:K19478]
109929479  tumor suppressor candidate 3 [KO:K19478]
109911532  ostc; oligosaccharyltransferase complex subunit ostc isoform X1 [KO:K26501]
109921165  tmem258; transmembrane protein 258 [KO:K26502]
109927301  man1b1b; mannosidase, alpha, class 1B, member 1b isoform X1 [KO:K23741] [EC:3.2.1.209]
109928645  man1a1; mannosyl-oligosaccharide 1,2-alpha-mannosidase IA [KO:K01230] [EC:3.2.1.113]
109930822  mannosyl-oligosaccharide 1,2-alpha-mannosidase IA-like [KO:K01230] [EC:3.2.1.113]
109930719  man1a2; mannosyl-oligosaccharide 1,2-alpha-mannosidase IB isoform X1 [KO:K01230] [EC:3.2.1.113]
109922664  mgat1b; alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b [KO:K00726] [EC:2.4.1.101]
109930439  man2a2; alpha-mannosidase 2x isoform X1 [KO:K01231] [EC:3.2.1.114]
109938999  man2a1; alpha-mannosidase 2 isoform X1 [KO:K01231] [EC:3.2.1.114]
109932782  mgat2; alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [KO:K00736] [EC:2.4.1.143]
109926873  beta-hexosaminidase subunit beta [KO:K12373] [EC:3.2.1.52]
109928769  alpha-(1,6)-fucosyltransferase [KO:K00717] [EC:2.4.1.68]
109936399  zgc:113333; beta-N-acetylhexosaminidase [KO:K14459] [EC:3.2.1.52]
109925893  hexosaminidase D-like isoform X1 [KO:K14459] [EC:3.2.1.52]
109910955  mgat4c; alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X1 [KO:K13748] [EC:2.4.1.201 2.4.1.145]
109914242  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [KO:K13748] [EC:2.4.1.201 2.4.1.145]
125480974  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [KO:K13748] [EC:2.4.1.201 2.4.1.145]
109932246  mgat4a; alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [KO:K00738] [EC:2.4.1.145]
109915483  mgat4b; alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [KO:K00738] [EC:2.4.1.145]
109916805  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like isoform X1 [KO:K00738] [EC:2.4.1.145]
109917086  beta-1,4-galactosyltransferase 1-like [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
109917873  b4galt2; beta-1,4-galactosyltransferase 2 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
109922940  beta-1,4-galactosyltransferase 3-like [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
109913946  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1 [KO:K00781] [EC:2.4.3.6]
109930789  b4galnt3b; beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1 [KO:K09656] [EC:2.4.1.244]
109918085  carbohydrate sulfotransferase 9-like [KO:K09673] [EC:2.8.2.-]
Compound
G00011   
G00012   
G00013   
G00014   
G00015   
G00016  Core fucose
G00017   
G00179   
G01813   
G05477   
G10665   
G10694   
G10716   
G10770   
G10841   
G10920   
G11000   
G11040   
G11933   
G12617   
G12625   
G12626   
G13047   
G13048   
G13049   
G13050   
G13055   
G13056   
G13057   
G13058   
G13059   
Reference
PMID:11412862
  Authors
Munro S.
  Title
What can yeast tell us about N-linked glycosylation in the Golgi apparatus?
  Journal
FEBS Lett 498:223-7 (2001)
DOI:10.1016/S0014-5793(01)02488-7
Reference
PMID:9878803
  Authors
Dean N.
  Title
Asparagine-linked glycosylation in the yeast Golgi.
  Journal
Biochim Biophys Acta 1426:309-22 (1999)
DOI:10.1016/S0304-4165(98)00132-9
Reference
PMID:9878780
  Authors
Herscovics A.
  Title
Processing glycosidases of Saccharomyces cerevisiae.
  Journal
Biochim Biophys Acta 1426:275-85 (1999)
DOI:10.1016/S0304-4165(98)00129-9
Reference
PMID:9218445
  Authors
Wang XH, Nakayama K, Shimma Y, Tanaka A, Jigami Y.
  Title
MNN6, a member of the KRE2/MNT1 family, is the gene for mannosylphosphate transfer in Saccharomyces cerevisiae.
  Journal
J Biol Chem 272:18117-24 (1997)
DOI:10.1074/jbc.272.29.18117
Reference
PMID:9756928
  Authors
Rayner JC, Munro S.
  Title
Identification of the MNN2 and MNN5 mannosyltransferases required for forming and extending the mannose branches of the outer chain mannans of Saccharomyces cerevisiae.
  Journal
J Biol Chem 273:26836-43 (1998)
DOI:10.1074/jbc.273.41.26836
Reference
PMID:10037752
  Authors
Jungmann J, Rayner JC, Munro S.
  Title
The Saccharomyces cerevisiae protein Mnn10p/Bed1p is a subunit of a Golgi mannosyltransferase complex.
  Journal
J Biol Chem 274:6579-85 (1999)
DOI:10.1074/jbc.274.10.6579
Reference
PMID:8253757
  Authors
Nakanishi-Shindo Y, Nakayama K, Tanaka A, Toda Y, Jigami Y.
  Title
Structure of the N-linked oligosaccharides that show the complete loss of alpha-1,6-polymannose outer chain from och1, och1 mnn1, and och1 mnn1 alg3 mutants of Saccharomyces cerevisiae.
  Journal
J Biol Chem 268:26338-45 (1993)
Reference
PMID:20233335
  Authors
Gomord V, Fitchette AC, Menu-Bouaouiche L, Saint-Jore-Dupas C, Plasson C, Michaud D, Faye L
  Title
Plant-specific glycosylation patterns in the context of therapeutic protein production.
  Journal
Plant Biotechnol J 8:564-87 (2010)
DOI:10.1111/j.1467-7652.2009.00497.x
Related
pathway
rtp00510  N-Glycan biosynthesis
KO pathway
ko00513   
LinkDB

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