KEGG   PATHWAY: sly03082
Entry
sly03082                    Pathway                                
Name
ATP-dependent chromatin remodeling - Solanum lycopersicum (tomato)
Class
Genetic Information Processing; Chromosome
Pathway map
sly03082  ATP-dependent chromatin remodeling
sly03082

Organism
Solanum lycopersicum (tomato) [GN:sly]
Gene
101267413  ISWI chromatin-remodeling complex ATPase CHR11-like [KO:K11654] [EC:5.6.2.-]
101245879  ISWI chromatin-remodeling complex ATPase CHR11 [KO:K11654] [EC:5.6.2.-]
101260506  DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
101266569  WD-40 repeat-containing protein MSI2 [KO:K10752]
101267299  WD-40 repeat-containing protein MSI4 [KO:K10752]
543534  MSI1; WD-40 repeat-containing protein MSI1 [KO:K10752]
101243728  WD-40 repeat-containing protein MSI4 [KO:K10752]
101246671  chromodomain-helicase-DNA-binding protein 5-like [KO:K11642] [EC:5.6.2.-]
101263831  CHD3-type chromatin-remodeling factor PICKLE-like isoform X1 [KO:K11643] [EC:5.6.2.-]
101268002  CHD3-type chromatin-remodeling factor PICKLE isoform X1 [KO:K11643] [EC:5.6.2.-]
101255404  uncharacterized protein LOC101255404 [KO:K11643] [EC:5.6.2.-]
101256864  histone deacetylase 6-like [KO:K06067] [EC:3.5.1.98]
101254943  histone deacetylase 19 isoform X2 [KO:K06067] [EC:3.5.1.98]
101251648  histone deacetylase 9 [KO:K06067] [EC:3.5.1.98]
101258377  HDA3; histone deacetylase [KO:K06067] [EC:3.5.1.98]
101245796  ATP-dependent helicase BRM [KO:K11647] [EC:5.6.2.-]
101256344  chromatin structure-remodeling complex protein BSH-like isoform X1 [KO:K11648]
101255453  chromatin structure-remodeling complex protein BSH [KO:K11648]
101265486  SWI/SNF complex subunit SWI3D [KO:K11649]
101250780  SWI/SNF complex subunit SWI3A [KO:K11649]
101268100  SWI/SNF complex subunit SWI3B [KO:K11649]
101264940  SWI/SNF complex subunit SWI3C [KO:K11649]
101248354  SWI/SNF complex component SNF12 homolog [KO:K11650]
101264507  SWI/SNF complex component SNF12 homolog [KO:K11650]
101260909  actin-related protein 4 [KO:K11340]
101253085  uncharacterized protein LOC101253085 [KO:K22184]
101261955  uncharacterized protein LOC101261955 isoform X2 [KO:K22184]
101245078  uncharacterized protein LOC101245078 isoform X1 [KO:K22184]
101247829  uncharacterized protein LOC101247829 isoform X1 [KO:K22184]
101260036  chromatin-remodeling ATPase INO80 [KO:K11665] [EC:5.6.2.-]
101248581  chromatin-remodeling complex subunit ies6 [KO:K11667]
101255762  uncharacterized protein LOC101255762 [KO:K11671]
101250723  ubiquitin carboxyl-terminal hydrolase 2 [KO:K05610] [EC:3.4.19.12]
101256745  ruvB-like protein 1 [KO:K04499] [EC:5.6.2.4]
101264735  ruvB-like protein 1 [KO:K04499] [EC:5.6.2.4]
101262595  ruvB-like 2 [KO:K11338] [EC:5.6.2.3]
101260649  actin-related protein 5 isoform X1 [KO:K11672]
101244230  actin-related protein 9 isoform X1 [KO:K11673]
101248082  protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [KO:K11661] [EC:5.6.2.-]
101262045  SWR1-complex protein 4 isoform X2 [KO:K11324]
101257425  transcription initiation factor TFIID subunit 14b [KO:K11341]
101248968  transcription initiation factor TFIID subunit 14b [KO:K11341]
101250882  SWR1 complex subunit 2 [KO:K11664]
101255365  probable histone H2AXb [KO:K11251]
101267931  probable histone H2A variant 1 [KO:K11251]
101259246  histone H2A-beta, sperm-like [KO:K11251]
101263314  histone H2A-beta, sperm-like [KO:K11251]
101260728  probable histone H2A.3 [KO:K11251]
101265669  histone H2A [KO:K11251]
101264975  histone H2AX-like [KO:K11251]
101247665  probable histone H2A.1 [KO:K11251]
101256806  probable histone H2AXb [KO:K11251]
101262690  histone H2A.6 [KO:K11251]
101268740  probable histone H2A variant 3 [KO:K11251]
101265996  histone H2A isoform X1 [KO:K11251]
101250163  HTA6; histone H2A.1 [KO:K11251]
101248985  histone H2AX-like [KO:K11251]
101256783  probable histone H2A variant 1 [KO:K11251]
101258369  probable histone H2A.3 [KO:K11251]
101245946  actin-related protein 6 isoform X1 [KO:K11662]
101245230  SWR1 complex subunit 6 [KO:K11663]
101258912  transformation/transcription domain-associated protein isoform X4 [KO:K08874]
101249778  nuA4 complex subunit EAF3 homolog isoform 1 [KO:K11339]
101243988  MRG family protein [KO:K11339]
101253542  uncharacterized protein LOC101253542 [KO:K11322]
101258428  enhancer of polycomb-like protein 1 [KO:K11322]
101252527  chromatin modification-related protein MEAF6 [KO:K11344]
101252026  chromatin modification-related protein MEAF6-like [KO:K11344]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
LinkDB

DBGET integrated database retrieval system