KEGG   PATHWAY: tge04146
Entry
tge04146                    Pathway                                
Name
Peroxisome - Theropithecus gelada (gelada)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
tge04146  Peroxisome
tge04146

Other DBs
GO: 0005777
Organism
Theropithecus gelada (gelada) [GN:tge]
Gene
112607230  PEX16; peroxisomal biogenesis factor 16 isoform X1 [KO:K13335]
112623720  PEX3; peroxisomal biogenesis factor 3 [KO:K13336]
112620949  PEX19; peroxisomal biogenesis factor 19 isoform X1 [KO:K13337]
112620460  ABCD3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
112621313  PEX1; peroxisome biogenesis factor 1 isoform X1 [KO:K13338]
112622331  PEX6; peroxisome biogenesis factor 6 isoform X1 [KO:K13339]
112617358  peroxisome assembly protein 26 [KO:K13340]
112617613  peroxisome assembly protein 26-like [KO:K13340]
112633203  PEX26; peroxisome assembly protein 26 [KO:K13340]
112622886  PEX7; peroxisomal biogenesis factor 7 [KO:K13341]
112619062  PEX5L; PEX5-related protein isoform X1 [KO:K13342]
112634921  PEX5; peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
112622523  PEX14; peroxisomal membrane protein PEX14 isoform X1 [KO:K13343]
112604999  PEX13; peroxisome biogenesis factor 13 [KO:K13344]
112609545  PEX12; LOW QUALITY PROTEIN: peroxisome assembly protein 12 [KO:K13345]
112612119  PEX10; peroxisome biogenesis factor 10 isoform X1 [KO:K13346]
112630261  PEX2; peroxisome biogenesis factor 2 isoform X1 [KO:K06664]
112634017  PXMP2; peroxisomal membrane protein 2 isoform X1 [KO:K13347]
112613053  MPV17L2; mpv17-like protein 2 isoform X1 [KO:K13348]
112636936  MPV17; protein Mpv17 [KO:K13348]
112614031  mpv17-like protein [KO:K13349]
112614665  uncharacterized protein LOC112614665 [KO:K13349]
112632893  PXMP4; peroxisomal membrane protein 4 isoform X1 [KO:K13350]
112629411  PEX11A; peroxisomal membrane protein 11A isoform X1 [KO:K13351]
112618613  PEX11B; peroxisomal membrane protein 11B isoform X1 [KO:K13352]
112612876  PEX11G; peroxisomal membrane protein 11C isoform X1 [KO:K13353]
112633405  SLC25A17; peroxisomal membrane protein PMP34 isoform X1 [KO:K13354]
112617609  HACL1; 2-hydroxyacyl-CoA lyase 1 isoform X1 [KO:K12261] [EC:4.1.2.63]
112626064  AMACR; alpha-methylacyl-CoA racemase isoform X1 [KO:K01796] [EC:5.1.99.4]
112631952  PHYH; phytanoyl-CoA dioxygenase, peroxisomal isoform X1 [KO:K00477] [EC:1.14.11.18]
112609997  ACOX1; peroxisomal acyl-coenzyme A oxidase 1 isoform X1 [KO:K00232] [EC:1.3.3.6]
112624878  ACOX3; peroxisomal acyl-coenzyme A oxidase 3 [KO:K00232] [EC:1.3.3.6]
112618624  ACOX2; peroxisomal acyl-coenzyme A oxidase 2 [KO:K10214] [EC:1.17.99.3]
112625827  HSD17B4; peroxisomal multifunctional enzyme type 2 isoform X1 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
112630140  SCP2; non-specific lipid-transfer protein isoform X1 [KO:K08764] [EC:2.3.1.176]
112608227  BAAT; bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
112619647  EHHADH; peroxisomal bifunctional enzyme isoform X1 [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
112618266  ACAA1; 3-ketoacyl-CoA thiolase, peroxisomal isoform X1 [KO:K07513] [EC:2.3.1.16]
112614183  DECR2; peroxisomal 2,4-dienoyl-CoA reductase isoform X1 [KO:K13237] [EC:1.3.1.124]
112612125  ECH1; delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
112615076  ABCD1; ATP-binding cassette sub-family D member 1 isoform X1 [KO:K05675] [EC:7.6.2.4]
112634903  ABCD2; ATP-binding cassette sub-family D member 2 [KO:K05676] [EC:7.6.2.4]
112628945  ABCD4; ATP-binding cassette sub-family D member 4 isoform X1 [KO:K05678] [EC:7.6.2.8]
112627810  SLC27A2; very long-chain acyl-CoA synthetase isoform X1 [KO:K08746] [EC:6.2.1.- 6.2.1.3]
112635977  ACSL3; long-chain-fatty-acid--CoA ligase 3 [KO:K01897] [EC:6.2.1.3]
112615494  ACSL4; long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
112631462  ACSL5; long-chain-fatty-acid--CoA ligase 5 isoform X1 [KO:K01897] [EC:6.2.1.3]
112624420  ACSL1; long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
112626539  ACSL6; long-chain-fatty-acid--CoA ligase 6 isoform X1 [KO:K01897] [EC:6.2.1.3]
112636685  PECR; peroxisomal trans-2-enoyl-CoA reductase [KO:K07753] [EC:1.3.1.38]
112622797  ECI2; enoyl-CoA delta isomerase 2, mitochondrial isoform X1 [KO:K13239] [EC:5.3.3.8]
112614336  NUDT7; peroxisomal coenzyme A diphosphatase NUDT7 isoform X1 [KO:K17879] [EC:3.6.1.77]
112627141  NUDT12; peroxisomal NADH pyrophosphatase NUDT12 [KO:K03426] [EC:3.6.1.22]
112631950  NUDT13; nucleoside diphosphate-linked moiety X motif 13 isoform X1 [KO:K03426] [EC:3.6.1.22]
112613128  NUDT19; nucleoside diphosphate-linked moiety X motif 19 [KO:K13355] [EC:3.6.1.77]
112632694  ACOT8; acyl-coenzyme A thioesterase 8 [KO:K11992] [EC:3.1.2.27]
112608024  CRAT; carnitine O-acetyltransferase isoform X1 [KO:K00624] [EC:2.3.1.7]
112621434  CROT; LOW QUALITY PROTEIN: peroxisomal carnitine O-octanoyltransferase [KO:K05940] [EC:2.3.1.137]
112614408  MLYCD; malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
112620792  GNPAT; dihydroxyacetone phosphate acyltransferase isoform X1 [KO:K00649] [EC:2.3.1.42]
112636319  AGPS; alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X1 [KO:K00803] [EC:2.5.1.26]
112606523  FAR1; fatty acyl-CoA reductase 1 [KO:K13356] [EC:1.2.1.84]
112634351  FAR2; fatty acyl-CoA reductase 2 isoform X1 [KO:K13356] [EC:1.2.1.84]
112634715  MVK; mevalonate kinase isoform X1 [KO:K00869] [EC:2.7.1.36]
112607334  PMVK; phosphomevalonate kinase isoform X1 [KO:K13273] [EC:2.7.4.2]
112636238  AGXT; serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
112634438  DAO; D-amino-acid oxidase [KO:K00273] [EC:1.4.3.3]
112623048  DDO; D-aspartate oxidase [KO:K00272] [EC:1.4.3.1]
112628312  IDH2; isocitrate dehydrogenase [NADP], mitochondrial isoform X1 [KO:K00031] [EC:1.1.1.42]
112635915  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
112622516  LOW QUALITY PROTEIN: isocitrate dehydrogenase [NADP] cytoplasmic-like [KO:K00031] [EC:1.1.1.42]
112632181  PAOX; peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 [KO:K00308] [EC:1.5.3.13]
112609321  PIPOX; peroxisomal sarcosine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
112622757  HMGCLL1; 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1 [KO:K01640] [EC:4.1.3.4]
112624737  HMGCL; hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [KO:K01640] [EC:4.1.3.4]
112631872  HAO2; hydroxyacid oxidase 2 isoform X1 [KO:K11517] [EC:1.1.3.15]
112633285  HAO1; hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
112606197  CAT; catalase [KO:K03781] [EC:1.11.1.6]
112605761  PRDX5; peroxiredoxin-5, mitochondrial isoform X1 [KO:K11187] [EC:1.11.1.24]
112621130  SOD1; superoxide dismutase [Cu-Zn] isoform X1 [KO:K04565] [EC:1.15.1.1]
112630615  LOW QUALITY PROTEIN: superoxide dismutase [Cu-Zn]-like [KO:K04565] [EC:1.15.1.1]
112623343  SOD2; superoxide dismutase [Mn], mitochondrial isoform X1 [KO:K04564] [EC:1.15.1.1]
112609895  NOS2; nitric oxide synthase, inducible [KO:K13241] [EC:1.14.13.39]
112614244  PRDX1; peroxiredoxin-1 isoform X1 [KO:K13279] [EC:1.11.1.24]
112629928  EPHX2; bifunctional epoxide hydrolase 2 isoform X1 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
112620448  GSTK1; glutathione S-transferase kappa 1 isoform X1 [KO:K13299] [EC:2.5.1.18]
112604828  XDH; xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
112628937  dehydrogenase/reductase SDR family member 4 isoform X1 [KO:K11147] [EC:1.1.-.-]
112629107  dehydrogenase/reductase SDR family member 4-like [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
tge00071  Fatty acid degradation
tge00120  Primary bile acid biosynthesis
tge00230  Purine metabolism
tge00564  Glycerophospholipid metabolism
tge00565  Ether lipid metabolism
tge00830  Retinol metabolism
tge00900  Terpenoid backbone biosynthesis
tge03320  PPAR signaling pathway
KO pathway
ko04146   
LinkDB

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