KEGG   PATHWAY: xhe03440
Entry
xhe03440                    Pathway                                
Name
Homologous recombination - Xiphophorus hellerii (green swordtail)
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
xhe03440  Homologous recombination
xhe03440

Other DBs
GO: 0000724
Organism
Xiphophorus hellerii (green swordtail) [GN:xhe]
Gene
116707704  atm; serine-protein kinase ATM isoform X1 [KO:K04728] [EC:2.7.11.1]
116707730  mre11; double-strand break repair protein MRE11 isoform X1 [KO:K10865]
116707746  brip1; Fanconi anemia group J protein isoform X1 [KO:K15362] [EC:5.6.2.3]
116708100  rpa1; replication protein A 70 kDa DNA-binding subunit [KO:K07466]
116709373  babam2; BRISC and BRCA1-A complex member 2 [KO:K12173]
116711594  xrcc2; DNA repair protein XRCC2 isoform X1 [KO:K10879]
116711652  rbbp8; DNA endonuclease RBBP8 isoform X1 [KO:K20773] [EC:3.1.-.-]
116712051  topbp1; DNA topoisomerase 2-binding protein 1 isoform X1 [KO:K10728]
116717334  rpa2; replication protein A 32 kDa subunit [KO:K10739]
116717622  nbn; nibrin isoform X1 [KO:K10867]
116717669  rad54b; DNA repair and recombination protein RAD54B isoform X1 [KO:K10877] [EC:5.6.2.-]
116720155  pold4; DNA polymerase delta subunit 4 isoform X1 [KO:K03505]
116720734  palb2; partner and localizer of BRCA2 [KO:K10897]
116722355  pold3; DNA polymerase delta subunit 3 isoform X1 [KO:K03504]
116723089  rad51c; DNA repair protein RAD51 homolog 3 [KO:K10870]
116723662  bard1; BRCA1-associated RING domain protein 1 [KO:K10683]
116725068  brcc3; lys-63-specific deubiquitinase BRCC36 [KO:K11864] [EC:3.4.19.-]
116725080  abraxas1; BRCA1-A complex subunit Abraxas 1 [KO:K20774]
116726044  [KO:K10875] [EC:5.6.2.-]
116726449  babam1; BRISC and BRCA1-A complex member 1 [KO:K20776]
116726713  brca1; breast cancer type 1 susceptibility protein isoform X1 [KO:K10605] [EC:2.3.2.27]
116727574  eme1; crossover junction endonuclease EME1 isoform X1 [KO:K10882] [EC:3.1.22.-]
116727856  uimc1; BRCA1-A complex subunit RAP80 isoform X1 [KO:K20775]
116728413  rad51d; DNA repair protein RAD51 homolog 4 [KO:K10871]
116728718  rad50; DNA repair protein RAD50 [KO:K10866] [EC:3.6.-.-]
116728730  [KO:K07466]
116729193  pold2; DNA polymerase delta subunit 2 [KO:K02328]
116729322  rad52; DNA repair protein RAD52 homolog isoform X1 [KO:K10873]
116729396  top3b; DNA topoisomerase 3-beta-1 [KO:K03165] [EC:5.6.2.1]
116730872  [KO:K10875] [EC:5.6.2.-]
116731113  rpa3; replication protein A 14 kDa subunit [KO:K10740]
116731357  sycp3; synaptonemal complex protein 3 [KO:K19528]
116731817  [KO:K10739]
116732064  mus81; crossover junction endonuclease MUS81 [KO:K08991] [EC:3.1.22.-]
116733639  rad51; DNA repair protein RAD51 homolog 1 [KO:K04482]
116733935  xrcc3; DNA repair protein XRCC3 [KO:K10880]
116735780  top3a; DNA topoisomerase 3-alpha isoform X1 [KO:K03165] [EC:5.6.2.1]
116736224  pold1; DNA polymerase delta catalytic subunit [KO:K02327] [EC:2.7.7.7]
116736410  blm; Bloom syndrome protein isoform X1 [KO:K10901] [EC:5.6.2.4]
116737035  ssbp1; single-stranded DNA-binding protein, mitochondrial [KO:K03111]
116737613  brca2; breast cancer type 2 susceptibility protein isoform X1 [KO:K08775]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   

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