GFIT result for
rko
|
GFIT result for
rko
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rko:JWS14_44480 (327 a.a.) |
-- |
K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > roa:Pd630_LPD09135(322) | 327 | 78.3 | 1709 | 8 | <> | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpsk:JWS13_04200(328) | 330 | 77.0 | 1688 | 5 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rop:ROP_pROB01-05350(331) | 326 | 72.1 | 1590 | 4 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > roz:CBI38_31175(323) | 321 | 57.0 | 1185 | 8 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rha:RHA1_ro11147(323) | 329 | 54.1 | 1101 | 10 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > req:REQ_26630(323) | 320 | 50.0 | 945 | 5 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pdef:P9209_05125(324) | 319 | 50.8 | 921 | 3 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rcr:NCTC10994_00973(313) | 319 | 49.2 | 910 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhod:AOT96_34395(324) | 315 | 47.6 | 910 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rav:AAT18_03845(325) | 320 | 47.8 | 897 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ncy:NOCYR_3082(323) | 322 | 47.2 | 876 | 3 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > reb:XU06_30590(324) | 315 | 47.3 | 876 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhq:IM25_17355(322) | 315 | 47.6 | 874 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rrz:CS378_19505(325) | 322 | 47.8 | 873 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpy:Y013_03425(322) | 315 | 47.3 | 871 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rrt:4535765_02469(312) | 312 | 48.1 | 870 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rby:CEJ39_14110(322) | 316 | 47.5 | 865 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nfa:NFA_29400(320) | 324 | 41.4 | 810 | 6 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actn:L083_1682(393) | 326 | 45.7 | 803 | 18 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nyu:D7D52_23495(?) | 317 | 44.8 | 795 | 0 | -- | - | |||
| > nspu:IFM12276_26510(320) | 319 | 42.3 | 794 | 0 | -- | hypothetical protein | |||
| > nad:NCTC11293_02099(324) | 327 | 44.6 | 792 | 5 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > noz:DMB37_00695(315) | 316 | 41.8 | 785 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nod:FOH10_10960(314) | 314 | 44.6 | 777 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ntc:KHQ06_20635(318) | 317 | 43.2 | 775 | 2 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nie:KV110_20845(315) | 317 | 42.0 | 773 | 8 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhaw:RMN56_26030(?) | 322 | 44.7 | 771 | 0 | -- | - | |||
| > mcee:MCEL_17150(318) | 325 | 44.3 | 770 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aou:ACTOB_003949(?) | 325 | 42.8 | 766 | 0 | -- | - | |||
| > nbr:O3I_020445(318) | 320 | 42.5 | 766 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nya:LTV02_14895(321) | 319 | 42.0 | 763 | 5 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rer:RER_pREL1-01040(279) | 275 | 46.2 | 761 | 2 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nhu:H0264_19415(314) | 318 | 41.2 | 760 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gor:KTR9_5426(320) | 324 | 43.2 | 759 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pbro:HOP40_18535(312) | 323 | 44.3 | 759 | 20 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ngp:LTT66_30105(315) | 316 | 41.8 | 753 | 6 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aih:Aiant_82070(327) | 319 | 43.6 | 750 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actl:L3i22_060250(334) | 320 | 42.2 | 745 | 21 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccaz:COUCH_26075(410) | 327 | 43.4 | 741 | 16 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afs:AFR_28570(389) | 324 | 41.7 | 739 | 12 | -- | K01971 | ligD | DNA polymerase LigD ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > asic:Q0Z83_112230(?) | 317 | 41.3 | 733 | 0 | -- | - | |||
| > cfi:Celf_0800(491) | 328 | 43.6 | 733 | 13 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nfr:ERS450000_01148(295) | 304 | 40.5 | 729 | 6 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ahm:TL08_19410(347) | 328 | 43.3 | 728 | 2 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mkm:Mkms_5930(329) | 314 | 44.9 | 723 | 6 | -- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmc:Mmcs_5528(329) | 314 | 44.9 | 723 | 4 | -- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mtem:GCE86_11915(309) | 319 | 43.3 | 723 | 10 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > celh:GXP71_12485(499) | 324 | 42.6 | 721 | 6 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msa:Mycsm_07191(330) | 323 | 42.1 | 715 | 5 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ngn:LCN96_18550(334) | 329 | 41.0 | 714 | 10 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acad:UA74_22360(384) | 332 | 42.5 | 712 | 7 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acti:UA75_22835(384) | 332 | 42.5 | 712 | 6 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sacc:EYD13_10390(313) | 320 | 43.1 | 710 | 3 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > noa:BKM31_27980(334) | 324 | 41.7 | 706 | 6 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > spiq:OHA34_30840(?) | 326 | 41.7 | 703 | 0 | -- | - | |||
| > mflv:NCTC10271_02243(322) | 318 | 42.5 | 697 | 6 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > now:GBF35_18495(333) | 326 | 42.3 | 696 | 6 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhai:OHB01_28760(?) | 326 | 41.4 | 695 | 0 | -- | - | |||
| > rfa:A3L23_05167(309) | 310 | 41.6 | 693 | 3 | -> | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > led:BBK82_36775(480) | 325 | 39.1 | 692 | 6 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > strc:AA958_07435(334) | 329 | 40.7 | 692 | 9 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ahg:AHOG_20405(333) | 327 | 42.2 | 691 | 3 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tcu:Tcur_1208(316) | 327 | 41.3 | 690 | 2 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amaz:LUW76_36950(324) | 327 | 40.7 | 689 | 9 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsol:FSW04_15890(798) | 333 | 41.1 | 688 | 11 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agra:AGRA3207_005930(324) | 322 | 41.3 | 686 | 5 | -- | K01971 | ligD | DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tbi:Tbis_2338(321) | 328 | 41.5 | 685 | 3 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ncx:Nocox_15540(334) | 329 | 40.7 | 684 | 9 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfla:Pflav_021830(322) | 326 | 39.3 | 684 | 11 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sdec:L3078_05670(323) | 329 | 42.6 | 678 | 16 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amyb:BKN51_01540(318) | 326 | 41.4 | 677 | 5 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > athm:L1857_29160(333) | 325 | 41.2 | 677 | 11 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pdx:Psed_4989(683) | 323 | 40.6 | 677 | 41 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cai:Caci_5248(495) | 332 | 41.0 | 676 | 9 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppel:H6H00_08145(322) | 320 | 42.5 | 676 | 22 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > celz:E5225_05400(314) | 325 | 41.8 | 675 | 11 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aori:SD37_31835(321) | 327 | 40.7 | 674 | 8 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amq:AMETH_5252(333) | 324 | 40.4 | 673 | 9 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aja:AJAP_30105(318) | 323 | 40.9 | 671 | 6 | -- | K01971 | ligD | Hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhs:A3Q41_04980(278) | 281 | 42.3 | 670 | 3 | -> | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aroo:NQK81_13585(321) | 324 | 40.7 | 668 | 12 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > malv:MALV_56170(314) | 316 | 42.1 | 666 | 4 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aoi:AORI_1870(318) | 323 | 40.2 | 665 | 9 | -- | K01971 | ligD | lig; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fal:FRAAL4382(581) | 325 | 40.6 | 665 | 122 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsd:BLASA_3098(323) | 323 | 40.6 | 661 | 10 | -- | K01971 | ligD | LigD; DNA ligase D/DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sbae:DSM104329_04323(723) | 334 | 40.1 | 660 | 11 | -- | lig; DNA ligase | |||
| > bala:DSM104299_02990(808) | 334 | 39.5 | 659 | 0 | -- | ATP-dependent DNA ligase | |||
| > cprt:FIC82_009535(903) | 337 | 40.4 | 659 | 65 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > jtl:M6D93_05340(501) | 330 | 39.4 | 659 | 2 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > madi:A7U43_28175(?) | 312 | 42.6 | 659 | 0 | -- | - | |||
| > mgau:MGALJ_60070(335) | 318 | 42.1 | 658 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dhi:LH044_20170(?) | 332 | 39.8 | 657 | 0 | -- | - | |||
| > amav:GCM10025877_08610(?) | 328 | 39.9 | 656 | 0 | -- | - | |||
| > shar:HUT13_25850(320) | 326 | 41.1 | 656 | 21 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actw:F7P10_31570(324) | 329 | 40.1 | 655 | 14 | -- | K01971 | ligD | DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cceu:CBR64_00560(865) | 336 | 40.8 | 655 | 23 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmad:BAY61_28605(484) | 325 | 41.2 | 654 | 6 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smao:CAG99_02035(330) | 328 | 42.1 | 653 | 24 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > leif:HF024_11835(820) | 322 | 41.3 | 652 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > svi:Svir_34920(477) | 333 | 40.5 | 650 | 2 | -- | K01971 | ligD | DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |