KEGG   PATHWAY: caua03022
Entry
caua03022                   Pathway                                
Name
Basal transcription factors - Carassius auratus (goldfish)
Class
Genetic Information Processing; Transcription
Pathway map
caua03022  Basal transcription factors
caua03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Carassius auratus (goldfish) [GN:caua]
Gene
113121102  transcription initiation factor IIA subunit 1-like [KO:K03122]
113121159  transcription initiation factor IIA subunit 1-like [KO:K03122]
113063036  transcription initiation factor IIA subunit 1-like [KO:K03122]
113057336  gtf2a1l; TFIIA-alpha and beta-like factor isoform X1 [KO:K03122]
113049509  transcription initiation factor IIA subunit 2-like [KO:K03123]
113070428  transcription initiation factor IIA subunit 2 [KO:K03123]
113052300  transcription initiation factor IIA subunit 2 [KO:K03123]
113116168  transcription initiation factor IIB-like [KO:K03124]
113116983  transcription initiation factor IIB [KO:K03124]
113045836  transcription initiation factor IIB-like [KO:K03124]
113112721  TATA-box-binding protein-like [KO:K03120]
113041436  TATA box-binding protein-like protein 1 [KO:K03120]
113112987  TATA-box-binding protein-like [KO:K03120]
113057002  TATA-box-binding protein [KO:K03120]
113080412  TATA box-binding protein-like protein 1 [KO:K03120]
113065598  TATA box-binding protein-like protein 1 [KO:K03120]
113117941  TATA box-binding protein-like protein 2 isoform X1 [KO:K03120]
113076412  transcription initiation factor TFIID subunit 1-like isoform X1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
113078648  taf2; transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
113075441  transcription initiation factor TFIID subunit 7-like [KO:K03132]
113114116  transcription initiation factor TFIID subunit 7-like [KO:K03132]
113041431  transcription initiation factor TFIID subunit 8-like [KO:K14649]
113098275  transcription initiation factor TFIID subunit 8-like [KO:K14649]
113065322  transcription initiation factor TFIID subunit 8-like [KO:K14649]
113065583  transcription initiation factor TFIID subunit 8 [KO:K14649]
113048233  transcription initiation factor TFIID subunit 3-like [KO:K14650]
113061498  taf3; transcription initiation factor TFIID subunit 3 [KO:K14650]
113107267  transcription initiation factor TFIID subunit 10-like isoform X1 [KO:K03134]
113093938  transcription initiation factor TFIID subunit 10-like [KO:K03134]
113107581  transcription initiation factor TFIID subunit 10-like isoform X1 [KO:K03134]
113043433  transcription initiation factor TFIID subunit 5-like isoform X1 [KO:K03130]
113044046  transcription initiation factor TFIID subunit 5-like [KO:K03130]
113044060  transcription initiation factor TFIID subunit 5-like [KO:K03130]
113059232  taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1 [KO:K03130]
113061409  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
113066908  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
113055245  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
113043329  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
113037748  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
113111241  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
113117988  transcription initiation factor TFIID subunit 4-like [KO:K03129]
113116004  transcription initiation factor TFIID subunit 12-like [KO:K03126]
113059314  transcription initiation factor TFIID subunit 12-like [KO:K03126]
113059570  transcription initiation factor TFIID subunit 12-like [KO:K03126]
113054313  TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
113083300  transcription initiation factor TFIID subunit 6-like [KO:K03131]
113072647  transcription initiation factor TFIID subunit 6-like [KO:K03131]
113105510  taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
113070106  transcription initiation factor TFIID subunit 9-like [KO:K14535]
113038349  transcription initiation factor TFIID subunit 9-like isoform X1 [KO:K14535]
113041003  transcription initiation factor TFIID subunit 11-like [KO:K03135]
113094064  transcription initiation factor TFIID subunit 11-like [KO:K03135]
113069169  transcription initiation factor TFIID subunit 13 [KO:K03127]
113041590  RNA-binding protein FUS-like isoform X1 [KO:K14651]
113108702  LOW QUALITY PROTEIN: general transcription factor IIE subunit 1-like [KO:K03136]
113053237  general transcription factor IIE subunit 1-like [KO:K03136]
113094235  general transcription factor IIE subunit 2-like [KO:K03137]
113107578  general transcription factor IIE subunit 2-like [KO:K03137]
113044261  general transcription factor IIE subunit 2-like [KO:K03137]
113045179  gtf2f1; general transcription factor IIF subunit 1 isoform X1 [KO:K03138]
113109018  general transcription factor IIF subunit 2-like isoform X1 [KO:K03139] [EC:5.6.2.-]
113109292  general transcription factor IIF subunit 2-like isoform X1 [KO:K03139] [EC:5.6.2.-]
113044471  general transcription factor IIF subunit 2-like isoform X1 [KO:K03139] [EC:5.6.2.-]
113066598  general transcription factor IIH subunit 1-like [KO:K03141]
113066599  general transcription factor IIH subunit 1-like [KO:K03141]
113042936  general transcription factor IIH subunit 1-like [KO:K03141]
113049408  general transcription factor IIH subunit 2-like [KO:K03142]
113094249  gtf2h3; general transcription factor IIH subunit 3 [KO:K03143]
113119523  general transcription factor IIH subunit 4-like [KO:K03144]
113090813  general transcription factor IIH subunit 4-like [KO:K03144]
113092319  general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
113050867  general transcription and DNA repair factor IIH helicase subunit XPB-like isoform X1 [KO:K10843] [EC:5.6.2.4]
113115060  general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
113058450  general transcription and DNA repair factor IIH helicase subunit XPD-like [KO:K10844] [EC:5.6.2.3]
113120957  general transcription factor IIH subunit 5-like [KO:K10845]
113063197  general transcription factor IIH subunit 5 [KO:K10845]
113045509  general transcription factor IIH subunit 5 [KO:K10845]
113049630  cyclin-dependent kinase 7 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
113080483  cyclin-dependent kinase 7-like [KO:K02202] [EC:2.7.11.22 2.7.11.23]
113112576  CDK-activating kinase assembly factor MAT1-like [KO:K10842]
113078320  CDK-activating kinase assembly factor MAT1-like [KO:K10842]
113056892  mnat1; CDK-activating kinase assembly factor MAT1 isoform X1 [KO:K10842]
113049056  cyclin-H-like [KO:K06634]
113079160  cyclin-H-like isoform X1 [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
caua03020  RNA polymerase
caua03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

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