KEGG   PATHWAY: dgt00230
Entry
dgt00230                    Pathway                                
Name
Purine metabolism - Dendronephthya gigantea (soft corals)
Class
Metabolism; Nucleotide metabolism
Pathway map
dgt00230  Purine metabolism
dgt00230

Module
dgt_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:dgt00230]
dgt_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dgt00230]
dgt_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dgt00230]
dgt_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dgt00230]
dgt_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dgt00230]
dgt_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:dgt00230]
dgt_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:dgt00230]
Other DBs
GO: 0006163 0042278
Organism
Dendronephthya gigantea (soft corals) [GN:dgt]
Gene
114520747  ADP-ribose pyrophosphatase, mitochondrial-like [KO:K13988] [EC:3.6.1.13]
114526288  phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
114524448  ribose-phosphate pyrophosphokinase 2-like [KO:K00948] [EC:2.7.6.1]
114527889  amidophosphoribosyltransferase-like [KO:K00764] [EC:2.4.2.14]
114532554  trifunctional purine biosynthetic protein adenosine-3-like [KO:K11787] [EC:6.3.4.13 2.1.2.2 6.3.3.1]
114526660  phosphoribosylformylglycinamidine synthase-like [KO:K01952] [EC:6.3.5.3]
114527900  multifunctional protein ADE2-like [KO:K01587] [EC:4.1.1.21 6.3.2.6]
114519619  adenylosuccinate lyase-like [KO:K01756] [EC:4.3.2.2]
114518024  bifunctional purine biosynthesis protein PURH-like [KO:K00602] [EC:2.1.2.3 3.5.4.10]
114516456  adenine phosphoribosyltransferase-like [KO:K00759] [EC:2.4.2.7]
114533774  cytosolic 5'-nucleotidase 1A-like isoform X1 [KO:K01081] [EC:3.1.3.5]
114532703  uncharacterized protein LOC114532703 [KO:K01081] [EC:3.1.3.5]
114534822  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
114520250  snake venom 5'-nucleotidase-like [KO:K01081] [EC:3.1.3.5]
114538028  cytosolic purine 5'-nucleotidase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
114534371  5'-nucleotidase-like [KO:K19970] [EC:3.1.3.5]
114532716  purine nucleoside phosphorylase-like [KO:K03783] [EC:2.4.2.1]
114517808  hypoxanthine-guanine phosphoribosyltransferase-like [KO:K00760] [EC:2.4.2.8]
114535117  hypoxanthine-guanine phosphoribosyltransferase-like [KO:K00760] [EC:2.4.2.8]
114536840  inosine-5'-monophosphate dehydrogenase 1b-like [KO:K00088] [EC:1.1.1.205]
114525970  inosine-5'-monophosphate dehydrogenase 1-like [KO:K00088] [EC:1.1.1.205]
114528756  nucleoside diphosphate kinase 6-like [KO:K00940] [EC:2.7.4.6]
114529995  nucleoside diphosphate kinase 7-like [KO:K00940] [EC:2.7.4.6]
114521400  nucleoside diphosphate kinase-like [KO:K00940] [EC:2.7.4.6]
114535529  adenylate kinase 9-like isoform X1 [KO:K18533] [EC:2.7.4.3 2.7.4.6]
114516040  ectonucleoside triphosphate diphosphohydrolase 1-like isoform X1 [KO:K01510] [EC:3.6.1.5]
114529099  soluble calcium-activated nucleotidase 1-like [KO:K12304] [EC:3.6.1.6]
114515884  ectonucleoside triphosphate diphosphohydrolase 4-like [KO:K12305] [EC:3.6.1.6]
114531619  ectonucleoside triphosphate diphosphohydrolase 5-like [KO:K01511] [EC:3.6.1.6]
114524949  U8 snoRNA-decapping enzyme-like [KO:K16855] [EC:3.6.1.62 3.6.1.64]
114519099  inosine triphosphate pyrophosphatase-like [KO:K01519] [EC:3.6.1.66]
114534119  indole-3-acetaldehyde oxidase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
114534120  xanthine dehydrogenase/oxidase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
114519687  LOW QUALITY PROTEIN: xanthine dehydrogenase/oxidase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
114519708  xanthine dehydrogenase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
114539283  xanthine dehydrogenase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
114523124  xanthine dehydrogenase/oxidase-like isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
114535854  bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]-like [KO:K01518] [EC:3.6.1.17]
114518105  GMP synthase [glutamine-hydrolyzing]-like [KO:K01951] [EC:6.3.5.2]
114516535  GMP reductase 2-like [KO:K00364] [EC:1.7.1.7]
114521426  LOW QUALITY PROTEIN: guanine deaminase-like [KO:K01487] [EC:3.5.4.3]
114525679  guanylate kinase-like isoform X1 [KO:K00942] [EC:2.7.4.8]
114527415  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
114528753  ribonucleoside-diphosphate reductase subunit M2-like [KO:K10808] [EC:1.17.4.1]
114525158  HD domain-containing protein 2-like [KO:K07023] [EC:3.1.3.89]
114518214  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1-like [KO:K21138] [EC:3.1.7.2]
114520988  adenylate cyclase type 5-like [KO:K08045] [EC:4.6.1.1]
114524446  adenylate cyclase type 9-like [KO:K08049] [EC:4.6.1.1]
114523321  guanylate cyclase soluble subunit alpha-2-like [KO:K12318] [EC:4.6.1.2]
114523516  guanylate cyclase soluble subunit beta-1-like [KO:K12319] [EC:4.6.1.2]
114523320  guanylate cyclase soluble subunit beta-1-like [KO:K12319] [EC:4.6.1.2]
114523417  guanylate cyclase soluble subunit beta-1-like [KO:K12319] [EC:4.6.1.2]
114519212  receptor-type guanylate cyclase Gyc76C-like [KO:K01769] [EC:4.6.1.2]
114529069  receptor-type guanylate cyclase Gyc76C-like [KO:K01769] [EC:4.6.1.2]
114525624  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B-like isoform X1 [KO:K13755] [EC:3.1.4.17]
114529161  cGMP-dependent 3',5'-cyclic phosphodiesterase-like isoform X1 [KO:K18283] [EC:3.1.4.17]
114520863  cGMP-inhibited 3',5'-cyclic phosphodiesterase A-like [KO:K19021] [EC:3.1.4.17]
114518217  retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta-like [KO:K13758]
114515815  cGMP-specific 3',5'-cyclic phosphodiesterase-like isoform X1 [KO:K13763] [EC:3.1.4.35]
114528877  probable 3',5'-cyclic phosphodiesterase pde-5 [KO:K18438] [EC:3.1.4.17 3.1.4.35]
114533287  cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A-like [KO:K18438] [EC:3.1.4.17 3.1.4.35]
114524518  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like isoform X1 [KO:K13298] [EC:3.1.4.17 3.1.4.35]
114527831  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like [KO:K13298] [EC:3.1.4.17 3.1.4.35]
114519918  adenylosuccinate synthetase isozyme 1-like [KO:K01939] [EC:6.3.4.4]
114524709  AMP deaminase 2-like [KO:K01490] [EC:3.5.4.6]
114544739  LOW QUALITY PROTEIN: AMP deaminase 2-like [KO:K01490] [EC:3.5.4.6]
114530921  adenosine kinase-like [KO:K00856] [EC:2.7.1.20]
114526950  adenosine deaminase-like [KO:K01488] [EC:3.5.4.4]
114522252  adenylate kinase 7-like [KO:K00939] [EC:2.7.4.3]
114527438  adenylate kinase-like isoform X1 [KO:K00939] [EC:2.7.4.3]
114530290  adenylate kinase 8-like [KO:K00939] [EC:2.7.4.3]
114521289  adenylate kinase isoenzyme 6-like isoform X1 [KO:K18532] [EC:2.7.4.3]
114527156  GTP:AMP phosphotransferase AK3, mitochondrial-like [KO:K00944] [EC:2.7.4.10]
114524454  cancer-related nucleoside-triphosphatase-like [KO:K06928] [EC:3.6.1.15]
114527256  venom phosphodiesterase 2-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
114524284  cAMP-specific 3',5'-cyclic phosphodiesterase 4C-like isoform X1 [KO:K13293] [EC:3.1.4.53]
114530694  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B-like [KO:K18437] [EC:3.1.4.53]
114520759  bis(5'-adenosyl)-triphosphatase-like [KO:K01522] [EC:3.6.1.29]
114516486  bis(5'-adenosyl)-triphosphatase ENPP4-like [KO:K18424] [EC:3.6.1.29]
114516403  bis(5'-adenosyl)-triphosphatase ENPP4-like [KO:K18424] [EC:3.6.1.29]
114518348  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like isoform X1 [KO:K13811] [EC:2.7.7.4 2.7.1.25]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
dgt00030  Pentose phosphate pathway
dgt00220  Arginine biosynthesis
dgt00250  Alanine, aspartate and glutamate metabolism
dgt00260  Glycine, serine and threonine metabolism
dgt00340  Histidine metabolism
dgt00630  Glyoxylate and dicarboxylate metabolism
dgt00730  Thiamine metabolism
dgt00740  Riboflavin metabolism
dgt00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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