Entry
Name
Autophagy - animal - Drosophila pseudoobscura
Description
Autophagy (or macroautophagy) is a cellular catabolic pathway involving in protein degradation, organelle turnover, and non-selective breakdown of cytoplasmic components, which is evolutionarily conserved among eukaryotes and exquisitely regulated. This progress initiates with production of the autophagosome, a double-membrane intracellular structure of reticular origin that engulfs cytoplasmic contents and ultimately fuses with lysosomes for cargo degradation. Autophagy is regulated in response to extra- or intracellular stress and signals such as starvation, growth factor deprivation and ER stress. Constitutive level of autophagy plays an important role in cellular homeostasis and maintains quality control of essential cellular components.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Drosophila pseudoobscura [GN:
dpo ]
Gene
4800882 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922 ] [EC:2.7.1.153 ]
4817932 phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649 ]
4815680 dual specificity mitogen-activated protein kinase kinase dSOR1 isoform X1 [KO:K04368 ] [EC:2.7.12.2 ]
4812475 uncharacterized protein LOC4812475 isoform X1 [KO:K15464 ]
4814128 WD repeat domain phosphoinositide-interacting protein 2 isoform X4 [KO:K17908 ]
4816543 WD repeat domain phosphoinositide-interacting protein 2 isoform X2 [KO:K17908 ]
4803040 WD repeat domain phosphoinositide-interacting protein 3 [KO:K22991 ]
6900231 mediator of RNA polymerase II transcription subunit 12 isoform X1 [KO:K21245 ]
4801157 beclin 1-associated autophagy-related key regulator [KO:K17889 ]
4812335 ras guanine nucleotide exchange factor V isoform X1 [KO:K21247 ]
4816222 UV radiation resistance-associated gene protein [KO:K21249 ]
4802432 inositol 1,4,5-trisphosphate receptor isoform X1 [KO:K04958 ]
4814759 eukaryotic translation initiation factor 2 subunit 1 [KO:K03237 ]
4804442 ubiquitin-like modifier-activating enzyme ATG7 [KO:K08337 ]
6902160 gamma-aminobutyric acid receptor-associated protein [KO:K08341 ]
6903723 gamma-aminobutyric acid receptor-associated protein [KO:K08341 ]
4800695 cysteine protease ATG4D isoform X1 [KO:K08342 ] [EC:3.4.22.-]
6903343 WD repeat and FYVE domain-containing protein 3 [KO:K22262 ]
6899768 vacuolar protein-sorting-associated protein 11 homolog [KO:K20179 ]
4800352 vacuolar protein sorting-associated protein 16 homolog [KO:K20180 ]
4815465 vacuolar protein sorting-associated protein 18 homolog [KO:K20181 ]
4815130 vacuolar protein sorting-associated protein 33A [KO:K20182 ]
6902747 vacuolar protein sorting-associated protein 41 homolog isoform X1 [KO:K20184 ]
Compound
C00350 Phosphatidylethanolamine
C01194 1-Phosphatidyl-D-myo-inositol
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
Reference
Authors
Meijer AJ, Codogno P.
Title
Regulation and role of autophagy in mammalian cells.
Journal
Reference
Authors
Deretic V.
Title
Autophagy in innate and adaptive immunity.
Journal
Reference
Authors
Levine B, Yuan J.
Title
Autophagy in cell death: an innocent convict?
Journal
Reference
Authors
Tanida I, Ueno T, Kominami E.
Title
LC3 conjugation system in mammalian autophagy.
Journal
Reference
Authors
Lum JJ, DeBerardinis RJ, Thompson CB.
Title
Autophagy in metazoans: cell survival in the land of plenty.
Journal
Reference
Authors
Reggiori F, Klionsky DJ.
Title
Autophagosomes: biogenesis from scratch?
Journal
Reference
Authors
Klionsky DJ, Emr SD.
Title
Autophagy as a regulated pathway of cellular degradation.
Journal
Reference
Authors
Bechet D, Tassa A, Taillandier D, Combaret L, Attaix D.
Title
Lysosomal proteolysis in skeletal muscle.
Journal
Reference
Authors
He C, Klionsky DJ
Title
Regulation mechanisms and signaling pathways of autophagy.
Journal
Reference
Authors
Yang Z, Klionsky DJ
Title
An overview of the molecular mechanism of autophagy.
Journal
Reference
Authors
Yang Z, Klionsky DJ
Title
Mammalian autophagy: core molecular machinery and signaling regulation.
Journal
Reference
Authors
Chen Y, Klionsky DJ
Title
The regulation of autophagy - unanswered questions.
Journal
Reference
Authors
Mizushima N, Yoshimori T, Ohsumi Y
Title
The role of Atg proteins in autophagosome formation.
Journal
Reference
Authors
Russell RC, Yuan HX, Guan KL
Title
Autophagy regulation by nutrient signaling.
Journal
Reference
Authors
Noda NN, Fujioka Y
Title
Atg1 family kinases in autophagy initiation.
Journal
Related pathway
dpo04141 Protein processing in endoplasmic reticulum
KO pathway
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