KEGG   PATHWAY: oaa04146
Entry
oaa04146                    Pathway                                
Name
Peroxisome - Ornithorhynchus anatinus (platypus)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
oaa04146  Peroxisome
oaa04146

Other DBs
GO: 0005777
Organism
Ornithorhynchus anatinus (platypus) [GN:oaa]
Gene
100089350  PEX16; peroxisomal biogenesis factor 16 isoform X1 [KO:K13335]
100075798  PEX3; peroxisomal biogenesis factor 3 [KO:K13336]
100083694  PEX19; peroxisomal biogenesis factor 19 isoform X1 [KO:K13337]
100080139  ABCD3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
100091862  PEX1; peroxisome biogenesis factor 1 [KO:K13338]
100077495  PEX6; peroxisome biogenesis factor 6 [KO:K13339]
100075861  PEX26; peroxisome assembly protein 26 [KO:K13340]
100085906  PEX7; peroxisomal biogenesis factor 7 isoform X1 [KO:K13341]
100074644  PEX5L; PEX5-related protein isoform X1 [KO:K13342]
100084181  PEX5; peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
100079050  PEX14; peroxisomal membrane protein PEX14 [KO:K13343]
100081624  PEX13; peroxisome biogenesis factor 13 isoform X1 [KO:K13344]
100080624  PEX12; peroxisome assembly protein 12 [KO:K13345]
100088192  PEX10; peroxisome biogenesis factor 10 isoform X1 [KO:K13346]
103166583  PEX2; peroxisome biogenesis factor 2 isoform X1 [KO:K06664]
100080108  PXMP2; peroxisomal membrane protein 2 [KO:K13347]
100080239  MPV17L2; mpv17-like protein 2 [KO:K13348]
100077073  MPV17; protein Mpv17 isoform X1 [KO:K13348]
100681252  MPV17L; mpv17-like protein [KO:K13349]
100078481  PXMP4; peroxisomal membrane protein 4 [KO:K13350]
100090616  PEX11A; peroxisomal membrane protein 11A [KO:K13351]
114808242  PEX11B; peroxisomal membrane protein 11B isoform X1 [KO:K13352]
100091135  PEX11G; peroxisomal membrane protein 11C [KO:K13353]
100076774  SLC25A17; peroxisomal membrane protein PMP34 [KO:K13354]
100084023  HACL1; 2-hydroxyacyl-CoA lyase 1 [KO:K12261] [EC:4.1.2.63]
100077603  AMACR; alpha-methylacyl-CoA racemase [KO:K01796] [EC:5.1.99.4]
100085334  PHYH; phytanoyl-CoA dioxygenase, peroxisomal [KO:K00477] [EC:1.14.11.18]
100083493  ACOX1; peroxisomal acyl-coenzyme A oxidase 1 isoform X1 [KO:K00232] [EC:1.3.3.6]
103169536  ACOX3; LOW QUALITY PROTEIN: peroxisomal acyl-coenzyme A oxidase 3 [KO:K00232] [EC:1.3.3.6]
100074731  ACOX2; peroxisomal acyl-coenzyme A oxidase 2 isoform X1 [KO:K10214] [EC:1.17.99.3]
100081754  HSD17B4; peroxisomal multifunctional enzyme type 2 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
100084202  SCP2; sterol carrier protein 2 [KO:K08764] [EC:2.3.1.176]
100084056  BAAT; bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
100082172  EHHADH; peroxisomal bifunctional enzyme isoform X3 [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
100090526  ACAA1; 3-ketoacyl-CoA thiolase, peroxisomal [KO:K07513] [EC:2.3.1.16]
100078257  DECR2; peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] [KO:K13237] [EC:1.3.1.124]
100681370  ECH1; delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
103170678  ABCD1; ATP-binding cassette sub-family D member 1 [KO:K05675] [EC:7.6.2.4]
100091377  ABCD2; ATP-binding cassette sub-family D member 2 [KO:K05676] [EC:7.6.2.4]
100080064  ABCD4; lysosomal cobalamin transporter ABCD4 isoform X1 [KO:K05678] [EC:7.6.2.8]
100075331  SLC27A2; very long-chain acyl-CoA synthetase [KO:K08746] [EC:6.2.1.- 6.2.1.3]
100073630  ACSL4; long-chain-fatty-acid--CoA ligase 4 isoform X2 [KO:K01897] [EC:6.2.1.3]
100082580  ACSL5; long-chain-fatty-acid--CoA ligase 5 [KO:K01897] [EC:6.2.1.3]
100080087  ACSL6; long-chain-fatty-acid--CoA ligase 6 isoform X2 [KO:K01897] [EC:6.2.1.3]
100081479  ACSL3; long-chain-fatty-acid--CoA ligase 3 isoform X1 [KO:K01897] [EC:6.2.1.3]
100076360  ACSL1; long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
100086606  PECR; peroxisomal trans-2-enoyl-CoA reductase [KO:K07753] [EC:1.3.1.38]
100079137  ECI2; enoyl-CoA delta isomerase 2 isoform X1 [KO:K13239] [EC:5.3.3.8]
100087809  NUDT7; peroxisomal coenzyme A diphosphatase NUDT7 [KO:K17879] [EC:3.6.1.77]
100074267  NUDT12; NAD-capped RNA hydrolase NUDT12 isoform X1 [KO:K03426] [EC:3.6.1.22]
100077178  NUDT13; NAD(P)H pyrophosphatase NUDT13, mitochondrial isoform X1 [KO:K03426] [EC:3.6.1.22]
100077816  NUDT19; nucleoside diphosphate-linked moiety X motif 19 isoform X1 [KO:K13355] [EC:3.6.1.77]
114806147  ACOT8; acyl-coenzyme A thioesterase 8 [KO:K11992] [EC:3.1.2.27]
100090652  CRAT; carnitine O-acetyltransferase isoform X1 [KO:K00624] [EC:2.3.1.7]
100077745  peroxisomal carnitine O-octanoyltransferase isoform X1 [KO:K05940] [EC:2.3.1.137]
100077493  MLYCD; malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
100085042  GNPAT; dihydroxyacetone phosphate acyltransferase isoform X1 [KO:K00649] [EC:2.3.1.42]
100084919  AGPS; alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X1 [KO:K00803] [EC:2.5.1.26]
100076543  FAR1; fatty acyl-CoA reductase 1 isoform X1 [KO:K13356] [EC:1.2.1.84]
100092894  FAR2; fatty acyl-CoA reductase 2 [KO:K13356] [EC:1.2.1.84]
100090013  MVK; mevalonate kinase [KO:K00869] [EC:2.7.1.36]
114807913  PMVK; phosphomevalonate kinase [KO:K13273] [EC:2.7.4.2]
100080454  AGXT; serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
100082667  DAO; D-amino-acid oxidase isoform X1 [KO:K00273] [EC:1.4.3.3]
100092192  DDO; D-aspartate oxidase isoform X1 [KO:K00272] [EC:1.4.3.1]
100076051  IDH2; isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
100080086  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic isoform X1 [KO:K00031] [EC:1.1.1.42]
100091298  PAOX; peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 [KO:K00308] [EC:1.5.3.13]
100079754  PIPOX; peroxisomal sarcosine oxidase isoform X1 [KO:K00306] [EC:1.5.3.1 1.5.3.7]
100089310  HMGCL; hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [KO:K01640] [EC:4.1.3.4]
100073773  HMGCLL1; 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1 [KO:K01640] [EC:4.1.3.4]
100084125  HAO1; hydroxyacid oxidase 1 isoform X1 [KO:K11517] [EC:1.1.3.15]
100076362  HAO2; hydroxyacid oxidase 2 [KO:K11517] [EC:1.1.3.15]
100076353  CAT; catalase [KO:K03781] [EC:1.11.1.6]
100083285  PRDX5; peroxiredoxin-5, mitochondrial [KO:K11187] [EC:1.11.1.24]
114817987  SOD1; superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
100090175  SOD2; superoxide dismutase [Mn], mitochondrial isoform X1 [KO:K04564] [EC:1.15.1.1]
100075386  NOS2; nitric oxide synthase, inducible isoform X1 [KO:K13241] [EC:1.14.13.39]
100076481  PRDX1; peroxiredoxin-1 [KO:K13279] [EC:1.11.1.24]
100093187  EPHX2; bifunctional epoxide hydrolase 2 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
100075063  GSTK1; glutathione S-transferase kappa 1 isoform X2 [KO:K13299] [EC:2.5.1.18]
100078370  xanthine dehydrogenase/oxidase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
100078272  xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
100681543  xanthine dehydrogenase/oxidase-like isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
100078307  xanthine dehydrogenase/oxidase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
100078335  LOW QUALITY PROTEIN: xanthine dehydrogenase/oxidase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
100085630  xanthine dehydrogenase/oxidase-like isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
100073679  xanthine dehydrogenase/oxidase-like isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
114806406  LOW QUALITY PROTEIN: xanthine dehydrogenase/oxidase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
100092951  dehydrogenase/reductase SDR family member 4-like [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
oaa00071  Fatty acid degradation
oaa00120  Primary bile acid biosynthesis
oaa00230  Purine metabolism
oaa00564  Glycerophospholipid metabolism
oaa00565  Ether lipid metabolism
oaa00830  Retinol metabolism
oaa00900  Terpenoid backbone biosynthesis
oaa03320  PPAR signaling pathway
KO pathway
ko04146   
LinkDB

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