KEGG   PATHWAY: soj02030
Entry
soj02030                    Pathway                                
Name
Bacterial chemotaxis - Shinella oryzae
Description
Chemotaxis is the process by which cells sense chemical gradients in their environment and then move towards more favorable conditions. In chemotaxis, events at the receptors control autophosphorylation of the CheA histidine kinase, and the phosphohistidine is the substrate for the response regulator CheY, which catalyzes the transfer of the phosphoryl group to a conserved aspartate. The resulting CheY-P can interact with the switch mechanism in the motor. This interaction causes a change in behavior, such as in direction or speed of rotation of flagella.
Class
Cellular Processes; Cell motility
Pathway map
soj02030  Bacterial chemotaxis
soj02030

Other DBs
GO: 0006935
Organism
Shinella oryzae [GN:soj]
Gene
K6301_00235  HAMP domain-containing protein [KO:K03406]
K6301_00315  methyl-accepting chemotaxis protein [KO:K03406]
K6301_00605  HAMP domain-containing protein [KO:K03406]
K6301_01410  globin-coupled sensor protein [KO:K03406]
K6301_01785  methyl-accepting chemotaxis protein [KO:K03406]
K6301_01790  methyl-accepting chemotaxis protein [KO:K03406]
K6301_02225  methyl-accepting chemotaxis protein [KO:K03406]
K6301_03750  methyl-accepting chemotaxis protein [KO:K03406]
K6301_09455  globin-coupled sensor protein [KO:K03406]
K6301_11245  methyl-accepting chemotaxis protein [KO:K03406]
K6301_12220  globin-coupled sensor protein [KO:K03406]
K6301_13080  PAS domain-containing methyl-accepting chemotaxis protein [KO:K03406]
K6301_20000  HAMP domain-containing methyl-accepting chemotaxis protein [KO:K03406]
K6301_21335  MCP four helix bundle domain-containing protein [KO:K03406]
K6301_21340  MCP four helix bundle domain-containing protein [KO:K03406]
K6301_21345  MCP four helix bundle domain-containing protein [KO:K03406]
K6301_21475  PAS domain-containing methyl-accepting chemotaxis protein [KO:K03406]
K6301_22550  HAMP domain-containing protein [KO:K03406]
K6301_09035  PAS domain-containing methyl-accepting chemotaxis protein [KO:K03406]
K6301_19750  sugar ABC transporter substrate-binding protein [KO:K10439]
K6301_23710  substrate-binding domain-containing protein [KO:K10439]
K6301_24910  substrate-binding domain-containing protein [KO:K10439]
K6301_12200  substrate-binding domain-containing protein [KO:K10439]
K6301_15000  ABC transporter substrate-binding protein [KO:K10439]
K6301_16245  substrate-binding domain-containing protein [KO:K10439]
K6301_16950  sugar ABC transporter substrate-binding protein [KO:K10439]
K6301_16975  sugar ABC transporter substrate-binding protein [KO:K10439]
K6301_17075  sugar-binding protein [KO:K10439]
K6301_17180  substrate-binding domain-containing protein [KO:K10439]
K6301_17745  sugar ABC transporter substrate-binding protein [KO:K10439]
K6301_19440  substrate-binding domain-containing protein [KO:K10439]
K6301_20165  substrate-binding domain-containing protein [KO:K10439]
K6301_20945  substrate-binding domain-containing protein [KO:K10439]
K6301_20985  substrate-binding domain-containing protein [KO:K10439]
K6301_21405  substrate-binding domain-containing protein [KO:K10439]
K6301_21550  substrate-binding domain-containing protein [KO:K10439]
K6301_22000  sugar ABC transporter substrate-binding protein [KO:K10439]
K6301_22185  ABC transporter substrate-binding protein [KO:K10439]
K6301_22990  sugar ABC transporter substrate-binding protein [KO:K10439]
K6301_01905  ABC transporter substrate-binding protein [KO:K12368]
K6301_01425  chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
K6301_21325  chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
K6301_01430  chemotaxis protein CheW [KO:K03408]
K6301_09140  chemotaxis protein CheW [KO:K03408]
K6301_13085  chemotaxis protein CheW [KO:K03408]
K6301_21330  chemotaxis protein CheW [KO:K03408]
K6301_21350  chemotaxis protein CheW [KO:K03408]
K6301_01420  cheY1; chemotaxis response regulator CheY1 [KO:K03413]
K6301_01445  response regulator [KO:K03413]
K6301_11405  response regulator [KO:K03413]
K6301_21320  response regulator [KO:K03413]
K6301_01415  STAS domain-containing protein [KO:K03409]
K6301_01440  cheB; protein-glutamate O-methylesterase CheB [KO:K03412] [EC:3.1.1.61 3.5.1.44]
K6301_21360  chemotaxis response regulator protein-glutamate methylesterase [KO:K03412] [EC:3.1.1.61 3.5.1.44]
K6301_01450  cheD; chemoreceptor glutamine deamidase CheD [KO:K03411] [EC:3.5.1.44]
K6301_01435  cheR; protein-glutamate O-methylesterase CheR [KO:K00575] [EC:2.1.1.80]
K6301_18520  response regulator [KO:K00575] [EC:2.1.1.80]
K6301_21355  protein-glutamate O-methyltransferase CheR [KO:K00575] [EC:2.1.1.80]
K6301_01485  fliG; flagellar motor switch protein FliG [KO:K02410]
K6301_01495  FliM/FliN family flagellar motor switch protein [KO:K02416]
K6301_01490  fliN; flagellar motor switch protein FliN [KO:K02417]
K6301_01500  motA; flagellar motor stator protein MotA [KO:K02556]
K6301_01610  MotB family protein [KO:K02557]
K6301_11680  peptidoglycan -binding protein [KO:K02557]
Compound
C00049  L-Aspartate
C00107  Dipeptide
C00121  D-Ribose
C00124  D-Galactose
C00208  Maltose
C00716  Serine
Reference
PMID:12011078
  Authors
Kristich CJ, Ordal GW.
  Title
Bacillus subtilis CheD is a chemoreceptor modification enzyme required for chemotaxis.
  Journal
J Biol Chem 277:25356-62 (2002)
DOI:10.1074/jbc.M201334200
Reference
PMID:11722727
  Authors
Kirby JR, Kristich CJ, Saulmon MM, Zimmer MA, Garrity LF, Zhulin IB, Ordal GW.
  Title
CheC is related to the family of flagellar switch proteins and acts independently from CheD to control chemotaxis in Bacillus subtilis.
  Journal
Mol Microbiol 42:573-85 (2001)
DOI:10.1046/j.1365-2958.2001.02581.x
Reference
PMID:12920116
  Authors
Szurmant H, Bunn MW, Cannistraro VJ, Ordal GW.
  Title
Bacillus subtilis hydrolyzes CheY-P at the location of its action, the flagellar switch.
  Journal
J Biol Chem 278:48611-6 (2003)
DOI:10.1074/jbc.M306180200
Reference
PMID:14749334
  Authors
Szurmant H, Muff TJ, Ordal GW.
  Title
Bacillus subtilis CheC and FliY are members of a novel class of CheY-P-hydrolyzing proteins in the chemotactic signal transduction cascade.
  Journal
J Biol Chem 279:21787-92 (2004)
DOI:10.1074/jbc.M311497200
Reference
PMID:11158445
  Authors
Yoshihara S, Geng X, Okamoto S, Yura K, Murata T, Go M, Ohmori M, Ikeuchi M.
  Title
Mutational analysis of genes involved in pilus structure, motility and transformation competency in the unicellular motile cyanobacterium Synechocystis sp. PCC 6803.
  Journal
Plant Cell Physiol 42:63-73 (2001)
DOI:10.1093/pcp/pce007
Reference
PMID:8104179
  Authors
Darzins A.
  Title
The pilG gene product, required for Pseudomonas aeruginosa pilus production and twitching motility, is homologous to the enteric, single-domain response regulator CheY.
  Journal
J Bacteriol 175:5934-44 (1993)
DOI:10.1128/JB.175.18.5934-5944.1993
Reference
PMID:15187186
  Authors
Szurmant H, Ordal GW
  Title
Diversity in chemotaxis mechanisms among the bacteria and archaea.
  Journal
Microbiol Mol Biol Rev 68:301-19 (2004)
DOI:10.1128/MMBR.68.2.301-319.2004
Reference
PMID:18774298
  Authors
Rao CV, Glekas GD, Ordal GW
  Title
The three adaptation systems of Bacillus subtilis chemotaxis.
  Journal
Trends Microbiol 16:480-7 (2008)
DOI:10.1016/j.tim.2008.07.003
Reference
PMID:18990184
  Authors
Muff TJ, Ordal GW
  Title
The diverse CheC-type phosphatases: chemotaxis and beyond.
  Journal
Mol Microbiol 70:1054-61 (2008)
DOI:10.1111/j.1365-2958.2008.06482.x
Reference
PMID:19203648
  Authors
Miller LD, Russell MH, Alexandre G
  Title
Diversity in bacterial chemotactic responses and niche adaptation.
  Journal
Adv Appl Microbiol 66:53-75 (2009)
DOI:10.1016/S0065-2164(08)00803-4
Related
pathway
soj02040  Flagellar assembly
KO pathway
ko02030   
LinkDB

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