KEGG   PATHWAY: vap00620
Entry
vap00620                    Pathway                                
Name
Pyruvate metabolism - Variovorax paradoxus S110
Class
Metabolism; Carbohydrate metabolism
Pathway map
vap00620  Pyruvate metabolism
vap00620

Module
vap_M00168  CAM (Crassulacean acid metabolism), dark [PATH:vap00620]
vap_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vap00620]
vap_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vap00620]
Other DBs
GO: 0006090
Organism
Variovorax paradoxus S110 [GN:vap]
Gene
Vapar_6251  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Vapar_2526  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Vapar_5367  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Vapar_5478  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Vapar_5477  thiamine pyrophosphate protein domain protein TPP-binding [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Vapar_5334  2-oxo-acid dehydrogenase E1 subunit, homodimeric type [KO:K00163] [EC:1.2.4.1]
Vapar_2162  2-oxo-acid dehydrogenase E1 subunit, homodimeric type [KO:K00163] [EC:1.2.4.1]
Vapar_5149  alpha-ketoglutarate dehydrogenase [KO:K00163] [EC:1.2.4.1]
Vapar_5335  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
Vapar_2163  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
Vapar_5336  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Vapar_2165  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Vapar_2173  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Vapar_1703  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Vapar_6242  PQQ-dependent dehydrogenase, methanol/ethanol family [KO:K00114] [EC:1.1.2.8]
Vapar_3824  acetate kinase [KO:K00925] [EC:2.7.2.1]
Vapar_3808  Phosphate acetyltransferase [KO:K00625] [EC:2.3.1.8]
Vapar_4478  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Vapar_5100  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Vapar_3088  acetyl-CoA carboxylase, carboxyl transferase, alpha subunit [KO:K01962] [EC:6.4.1.2 2.1.3.15]
Vapar_0949  acetyl-CoA carboxylase, biotin carboxyl carrier protein [KO:K02160]
Vapar_6362  acetyl-CoA carboxylase, biotin carboxyl carrier protein [KO:K02160]
Vapar_6366  biotin/lipoyl attachment domain-containing protein [KO:K02160]
Vapar_0950  acetyl-CoA carboxylase, biotin carboxylase [KO:K01961] [EC:6.4.1.2 6.3.4.14]
Vapar_6363  acetyl-CoA carboxylase, biotin carboxylase [KO:K01961] [EC:6.4.1.2 6.3.4.14]
Vapar_1413  acetyl-CoA carboxylase, carboxyl transferase, beta subunit [KO:K01963] [EC:6.4.1.2 2.1.3.15]
Vapar_4711  acylphosphatase [KO:K01512] [EC:3.6.1.7]
Vapar_1651  Aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
Vapar_6271  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Vapar_2344  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Vapar_5977  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Vapar_5690  Aldehyde dehydrogenase (NAD(+)) [KO:K00138] [EC:1.2.1.-]
Vapar_5497  CoA-binding domain protein [KO:K24012] [EC:6.2.1.13]
Vapar_6147  CoA-binding domain protein [KO:K24012] [EC:6.2.1.13]
Vapar_1331  L-lactate dehydrogenase (cytochrome) [KO:K00101] [EC:1.1.2.3]
Vapar_1999  thiamine pyrophosphate protein TPP binding domain protein [KO:K00156] [EC:1.2.5.1]
Vapar_0052  FAD linked oxidase domain protein [KO:K00102] [EC:1.1.2.4]
Vapar_1699  Glyoxalase/bleomycin resistance protein/dioxygenase [KO:K01759] [EC:4.4.1.5]
Vapar_2133  lactoylglutathione lyase [KO:K01759] [EC:4.4.1.5]
Vapar_3703  lactoylglutathione lyase [KO:K01759] [EC:4.4.1.5]
Vapar_2338  hydroxyacylglutathione hydrolase [KO:K01069] [EC:3.1.2.6]
Vapar_5630  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Vapar_4717  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Vapar_5231  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Vapar_1774  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
Vapar_5338  Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase [KO:K00029] [EC:1.1.1.40]
Vapar_3958  Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase [KO:K00029] [EC:1.1.1.40]
Vapar_5270  Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase [KO:K00029] [EC:1.1.1.40]
Vapar_1432  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Vapar_2518  hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit [KO:K01676] [EC:4.2.1.2]
Vapar_2522  fumarate hydratase, class II [KO:K01679] [EC:4.2.1.2]
Vapar_5615  fumarate reductase/succinate dehydrogenase flavoprotein domain protein [KO:K00244] [EC:1.3.5.1]
Vapar_5618  succinate dehydrogenase and fumarate reductase iron-sulfur protein [KO:K00245] [EC:1.3.5.1]
Vapar_5617  conserved hypothetical protein [KO:K00246]
Vapar_5616  succinate dehydrogenase, cytochrome b subunit [KO:K00247]
Vapar_1373  Phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
Vapar_0147  Phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Vapar_1816  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
Vapar_0452  malate synthase G [KO:K01638] [EC:2.3.3.9]
Vapar_5341  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Vapar_2023  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Vapar_5873  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Vapar_4732  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Vapar_5670  Propanoyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
Vapar_1841  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Vapar_2923  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Vapar_0445  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Vapar_5357  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Vapar_0843  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Vapar_2373  2-isopropylmalate synthase [KO:K01649] [EC:2.3.3.13]
Vapar_2374  2-isopropylmalate synthase [KO:K01649] [EC:2.3.3.13]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00033  Acetate
C00036  Oxaloacetate
C00042  Succinate
C00058  Formate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00083  Malonyl-CoA
C00084  Acetaldehyde
C00122  Fumarate
C00149  (S)-Malate
C00186  (S)-Lactate
C00227  Acetyl phosphate
C00256  (R)-Lactate
C00332  Acetoacetyl-CoA
C00424  (S)-Lactaldehyde
C00469  Ethanol
C00546  Methylglyoxal
C00937  (R)-Lactaldehyde
C01251  (R)-2-Hydroxybutane-1,2,4-tricarboxylate
C02488  (R)-2-Ethylmalate
C02504  alpha-Isopropylmalate
C03248  Acetylenedicarboxylate
C03451  (R)-S-Lactoylglutathione
C03981  2-Hydroxyethylenedicarboxylate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05993  Acetyl adenylate
C05994  2-Propylmalate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Related
pathway
vap00010  Glycolysis / Gluconeogenesis
vap00020  Citrate cycle (TCA cycle)
vap00061  Fatty acid biosynthesis
vap00250  Alanine, aspartate and glutamate metabolism
vap00260  Glycine, serine and threonine metabolism
vap00290  Valine, leucine and isoleucine biosynthesis
vap00300  Lysine biosynthesis
vap00630  Glyoxylate and dicarboxylate metabolism
vap00640  Propanoate metabolism
vap00650  Butanoate metabolism
vap00760  Nicotinate and nicotinamide metabolism
KO pathway
ko00620   
LinkDB

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