KEGG   PATHWAY: shon04640
Entry
shon04640                   Pathway                                
Name
Hematopoietic cell lineage - Sturnira hondurensis
Description
Blood-cell development progresses from a hematopoietic stem cell (HSC), which can undergo either self-renewal or differentiation into a multilineage committed progenitor cell: a common lymphoid progenitor (CLP) or a common myeloid progenitor (CMP). A CLP gives rise to the lymphoid lineage of white blood cells or leukocytes-the natural killer (NK) cells and the T and B lymphocytes. A CMP gives rise to the myeloid lineage, which comprises the rest of the leukocytes, the erythrocytes (red blood cells), and the megakaryocytes that produce platelets important in blood clotting. Cells undergoing these differentiation process express a stage- and lineage-specific set of surface markers. Therefore cellular stages are identified by the specific expression patterns of these genes.
Class
Organismal Systems; Immune system
Pathway map
shon04640  Hematopoietic cell lineage
shon04640

Organism
Sturnira hondurensis [GN:shon]
Gene
118974221  CD34; hematopoietic progenitor cell antigen CD34 isoform X1 [KO:K06474]
118974245  THPO; thrombopoietin isoform X1 [KO:K06854]
118974340  CSF2RA; granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X1 [KO:K05066]
118974342  IL3RA; interleukin-3 receptor subunit alpha [KO:K04737]
118974345  [KO:K05066]
118977656  CSF3R; granulocyte colony-stimulating factor receptor isoform X1 [KO:K05061]
118978022  ITGA3; integrin alpha-3 [KO:K06482]
118978095  CSF3; granulocyte colony-stimulating factor [KO:K05423]
118978279  ITGAM; integrin alpha-M isoform X1 [KO:K06461]
118978285  TFRC; transferrin receptor protein 1 [KO:K06503]
118978582  KIT; mast/stem cell growth factor receptor Kit isoform X1 [KO:K05091] [EC:2.7.10.1]
118978841  IL9R; interleukin-9 receptor [KO:K05073]
118979605  GALT; galactose-1-phosphate uridylyltransferase isoform X1 [KO:K05056]
118980775  [KO:K04011]
118981330  [KO:K06752]
118981390  IL11; interleukin-11 [KO:K05417]
118981671  ITGA2; integrin alpha-2 isoform X1 [KO:K06481]
118981677  ITGA1; integrin alpha-1 [KO:K06480]
118981732  [KO:K06752]
118981889  IL1A; interleukin-1 alpha [KO:K04383]
118981894  IL1B; interleukin-1 beta [KO:K04519]
118981911  CSF1; macrophage colony-stimulating factor 1 isoform X1 [KO:K05453]
118981980  CD2; T-cell surface antigen CD2 [KO:K06449]
118981992  CD8B; T-cell surface glycoprotein CD8 beta chain [KO:K06459]
118982002  CD8A; T-cell surface glycoprotein CD8 alpha chain [KO:K06458]
118982019  FCGR1A; high affinity immunoglobulin gamma Fc receptor I isoform X1 [KO:K06498]
118982371  CD1E; T-cell surface glycoprotein CD1e, membrane-associated isoform X1 [KO:K06448]
118982376  [KO:K06448]
118982534  CD22; B-cell receptor CD22 isoform X1 [KO:K06467]
118982570  [KO:K04006]
118982573  CR2; complement receptor type 2 isoform X1 [KO:K04012]
118982574  [KO:K04011]
118982809  [KO:K06752]
118983156  CD59; CD59 glycoprotein [KO:K04008]
118983169  CD44; CD44 antigen isoform X1 [KO:K06256]
118983348  GP5; platelet glycoprotein V [KO:K06260]
118984928  [KO:K06752]
118985218  [KO:K06448]
118985219  [KO:K06448]
118985220  [KO:K06448]
118985637  ITGA4; integrin alpha-4 [KO:K06483]
118985704  ITGA6; integrin alpha-6 isoform X1 [KO:K06485]
118985812  [KO:K06448]
118985844  [KO:K06448]
118986159  CSF1R; macrophage colony-stimulating factor 1 receptor [KO:K05090] [EC:2.7.10.1]
118986405  GP9; platelet glycoprotein IX [KO:K06263]
118986595  CD38; ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 [KO:K01242] [EC:3.2.2.6 2.4.99.20]
118987483  MME; neprilysin [KO:K01389] [EC:3.4.24.11]
118987585  TNF; tumor necrosis factor isoform X1 [KO:K03156]
118987697  FCER2; low affinity immunoglobulin epsilon Fc receptor isoform X1 [KO:K06468]
118989401  IL5RA; interleukin-5 receptor subunit alpha [KO:K05067]
118990122  CSF2; granulocyte-macrophage colony-stimulating factor [KO:K05427]
118990129  IL4; interleukin-4 [KO:K05430]
118990131  IL5; LOW QUALITY PROTEIN: interleukin-5 [KO:K05428]
118990189  IL6R; interleukin-6 receptor subunit alpha isoform X1 [KO:K05055]
118990318  DNTT; DNA nucleotidylexotransferase isoform X1 [KO:K00977] [EC:2.7.7.31]
118991469  [KO:K06752]
118991472  [KO:K06752]
118991540  [KO:K06752]
118991542  [KO:K06752]
118991964  [KO:K11140] [EC:3.4.11.2]
118992858  EPO; erythropoietin [KO:K05437]
118994652  IL1R2; interleukin-1 receptor type 2 isoform X1 [KO:K04387]
118994653  IL1R1; interleukin-1 receptor type 1 isoform X1 [KO:K04386]
118994762  CD3G; T-cell surface glycoprotein CD3 gamma chain [KO:K06452]
118994764  CD3D; T-cell surface glycoprotein CD3 delta chain isoform X1 [KO:K06450]
118994765  CD3E; T-cell surface glycoprotein CD3 epsilon chain [KO:K06451]
118995431  GYPA; glycophorin-A [KO:K06575]
118995806  FLT3; receptor-type tyrosine-protein kinase FLT3 [KO:K05092] [EC:2.7.10.1]
118996884  MS4A1; B-lymphocyte antigen CD20 isoform X1 [KO:K06466]
118996898  CD5; T-cell surface glycoprotein CD5 [KO:K06455]
118997775  IL7; interleukin-7 isoform X1 [KO:K05431]
118998143  CD14; monocyte differentiation antigen CD14 [KO:K04391]
118998771  IL7R; interleukin-7 receptor subunit alpha [KO:K05072]
118999033  [KO:K06752]
118999034  [KO:K06752]
118999036  [KO:K06752]
118999037  [KO:K06752]
118999195  [KO:K06752]
118999808  [KO:K06473]
118999809  [KO:K06473]
118999914  KITLG; kit ligand isoform X1 [KO:K05461]
119000807  IL2RA; interleukin-2 receptor subunit alpha isoform X1 [KO:K05068]
119000991  CD36; platelet glycoprotein 4 [KO:K06259]
119001066  GP1BA; platelet glycoprotein Ib alpha chain [KO:K06261]
119001758  IL4R; interleukin-4 receptor subunit alpha isoform X1 [KO:K05071]
119001831  GP1BB; platelet glycoprotein Ib beta chain [KO:K06262]
119001963  ITGA2B; integrin alpha-IIb [KO:K06476]
119002273  CD9; CD9 antigen [KO:K06460]
119002350  CD4; T-cell surface glycoprotein CD4 [KO:K06454]
119003549  ITGB3; integrin beta-3 [KO:K06493]
Reference
  Authors
Janeway CA Jr, Travers P, Walport M, Shlomchik MJ
  Title
Immunobiology - International editon: The immune system in health and disease
  Journal
Harcourt Publishers Ltd, a subsidiary of Harcourt International Ltd (2001)
Reference
  Authors
Abe T
  Title
[Atlas of malignancies in hematopoietic organ - Morphology, immunology, chromosome and gene] (In Japanese)
  Journal
Nihonijishinhousya (2000)
Reference
  Authors
Rothenberg EV, Taghon T.
  Title
Molecular genetics of T cell development.
  Journal
Annu Rev Immunol 23:601-49 (2005)
DOI:10.1146/annurev.immunol.23.021704.115737
Reference
  Authors
Ceredig R, Rolink T.
  Title
A positive look at double-negative thymocytes.
  Journal
Nat Rev Immunol 2:888-97 (2002)
DOI:10.1038/nri937
Reference
  Authors
de Bruijn MF, Speck NA.
  Title
Core-binding factors in hematopoiesis and immune function.
  Journal
Oncogene 23:4238-48 (2004)
DOI:10.1038/sj.onc.1207763
Reference
  Authors
Radtke F, Wilson A, Mancini SJ, MacDonald HR.
  Title
Notch regulation of lymphocyte development and function.
  Journal
Nat Immunol 5:247-53 (2004)
DOI:10.1038/ni1045
Reference
  Authors
Spits H.
  Title
Development of alphabeta T cells in the human thymus.
  Journal
Nat Rev Immunol 2:760-72 (2002)
DOI:10.1038/nri913
Reference
PMID:9927518
  Authors
Di Santo JP, Aifantis I, Rosmaraki E, Garcia C, Feinberg J, Fehling HJ, Fischer A, von Boehmer H, Rocha B.
  Title
The common cytokine receptor gamma chain and the pre-T cell receptor provide independent but critically overlapping signals in early alpha/beta T cell development.
  Journal
J Exp Med 189:563-74 (1999)
DOI:10.1084/jem.189.3.563
Reference
  Authors
Mak TW, Penninger JM, Ohashi PS.
  Title
Knockout mice: a paradigm shift in modern immunology.
  Journal
Nat Rev Immunol 1:11-9 (2001)
DOI:10.1038/35095551
Reference
  Authors
Shapiro-Shelef M, Calame K.
  Title
Regulation of plasma-cell development.
  Journal
Nat Rev Immunol 5:230-42 (2005)
DOI:10.1038/nri1572
Reference
  Authors
Maillard I, Adler SH, Pear WS.
  Title
Notch and the immune system.
  Journal
Immunity 19:781-91 (2003)
DOI:10.1016/S1074-7613(03)00325-X
Reference
  Authors
Alpdogan O, van den Brink MR.
  Title
IL-7 and IL-15: therapeutic cytokines for immunodeficiency.
  Journal
Trends Immunol 26:56-64 (2005)
DOI:10.1016/j.it.2004.11.002
KO pathway
ko04640   

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