SSDB Best Search Result

Entry:sfa:Sfla_1982 (297 a.a.)
Name:DNA polymerase LigD, polymerase domain protein
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 83 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
sgr:SGR_2196 conserved hypothetical protein             K01971     296     1642     0.814      295     
sma:SAVERM_2946 putative DNA ligase                     K01971     293     1447     0.722      295     
sgu:SGLAU_22865 DNA polymerase LigD, polymerase domain- K01971     290     1404     0.720      289     
sco:SCO5308 conserved hypothetical protein              K01971     293     1387     0.702      295     
sct:SCAT_5459 conserved protein of unknown function     K01971     298      959     0.517      292     
stp:Strop_3967 DNA primase, small subunit               K01971     302      923     0.513      300     
sen:SACE_3549 DNA ligase (ATP)                          K01971     302      921     0.497      290     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      904     0.493      294     
amd:AMED_4197 ATP-dependent DNA ligase                  K01971     299      899     0.514      288     
ase:ACPL_519 DNA ligase (ATP)                           K01971     301      876     0.485      297     
nca:Noca_1237 ATP dependent DNA ligase                  K01971     304      862     0.507      292     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808      753     0.455      303     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      744     0.440      291     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      730     0.435      294     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      702     0.408      289     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770      696     0.419      301     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      692     0.415      301     
msm:MSMEG_5570 DNA ligase                               K01971     755      686     0.421      280     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      685     0.412      306     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      680     0.439      287     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      669     0.431      276     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      662     0.418      287     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      662     0.418      287     
mta:Moth_2082 conserved hypothetical protein            K01971     306      549     0.380      287     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      522     0.380      284     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      503     0.349      278     
chy:CHY_0025 conserved hypothetical protein             K01971     293      500     0.347      274     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      499     0.344      282     
sro:Sros_6714 DNA primase small subunit                            334      491     0.331      290     
phe:Phep_1702 DNA ligase D                              K01971     877      490     0.329      286     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      487     0.345      293     
sno:Snov_0819 DNA ligase D                              K01971     842      472     0.352      253     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      469     0.313      275     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      468     0.349      269     
ssy:SLG_04290 putative DNA ligase                       K01971     835      467     0.335      260     
ret:RHE_CH00617 putative DNA ligase protein             K01971     659      465     0.340      247     
sml:Smlt2530 putative DNA ligase family protein         K01971     849      463     0.343      268     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      462     0.332      292     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901      460     0.342      278     
mlo:mll2077 probable ATP-dependent DNA ligase                      833      458     0.318      289     
xau:Xaut_4365 DNA ligase D                              K01971     886      457     0.340      253     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      455     0.350      280     
dsy:DSY0616 hypothetical protein                        K01971     818      455     0.353      278     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      453     0.331      275     
pde:Pden_4186 conserved hypothetical protein            K01971     330      452     0.349      232     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      448     0.312      279     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      448     0.320      294     
swi:Swit_3982 DNA ligase D                              K01971     837      448     0.308      260     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      445     0.325      283     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      443     0.340      265     
scl:sce3523 unnamed protein product; High confidence in K01971     762      442     0.352      290     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      442     0.337      261     
rpa:TX73_018915 DNA ligase D                            K01971     914      438     0.352      261     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      436     0.356      253     
rle:pRL120229 putative DNA ligase family protein        K01971     881      433     0.323      263     
cpy:Cphy_1729 DNA ligase D                              K01971     813      431     0.317      271     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      429     0.313      262     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      425     0.331      275     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      409     0.280      275     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      405     0.337      291     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      397     0.335      248     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      376     0.302      291     
ppu:PP_3260 DNA ligase D                                K01971     833      366     0.309      282     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      359     0.339      283     
oih:OB3034 hypothetical conserved protein               K01971     595      340     0.275      280     
ksk:KSE_05320 hypothetical protein                      K01971     173      195     0.326      129     
vg:77950928 Gordonia phage Emperor; minor tail protein             483      146     0.244      266     
tre:TRIREDRAFT_62263 hypothetical protein                          576      128     0.272      136     
gmx:102667106 uncharacterized protein LOC102667106                 373      118     0.258      128     
cdn:BN940_06266 hypothetical protein                               210      117     0.281      185     
mdm:103400044 uncharacterized methyltransferase At2g410            348      113     0.345      84      
nmr:Nmar_1736 cob(II)yrinic acid a,c-diamide reductase  K04719     236      109     0.286      126     
lma:LMJF_25_2260 hypothetical protein                              123      108     0.283      99      
mja:MJ_ECS07 hypothetical protein                                  441      107     0.221      244     
sly:101256325 putative F-box/LRR-repeat protein At5g027            501      105     0.285      123     
yps:YPTB0560 hypothetical protein                                  278      105     0.360      75      
hsa:4717 NADH dehydrogenase [ubiquinone] 1 subunit C1,  K03967      76      103     0.395      43      
ptr:461494 NADH dehydrogenase [ubiquinone] 1 subunit C1 K03967      76      103     0.395      43      
nme:NMB0898 hypothetical protein                                    62      100     0.410      39      
sot:107057786 uncharacterized LOC107057786                         173       96     0.247      97      
ssc:100037985 NADH dehydrogenase [ubiquinone] 1 subunit K03967      76       95     0.389      36      
ocu:103350693 NADH dehydrogenase [ubiquinone] 1 subunit K03967      76       94     0.372      43      
bfr:BF0097 putative D-tyrosyl-tRNA deacylase            K07560     150       92     0.252      131     

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