SSDB Best Search Result

Entry:ssx:SACTE_4536 (297 a.a.)
Name:DNA polymerase LigD, polymerase domain protein
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 89 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
sgr:SGR_2196 conserved hypothetical protein             K01971     296     1600     0.790      295     
sma:SAVERM_2946 putative DNA ligase                     K01971     293     1454     0.736      295     
sgu:SGLAU_22865 DNA polymerase LigD, polymerase domain- K01971     290     1438     0.729      292     
sco:SCO5308 conserved hypothetical protein              K01971     293     1375     0.698      295     
sct:SCAT_5459 conserved protein of unknown function     K01971     298      973     0.521      292     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      959     0.512      301     
stp:Strop_3967 DNA primase, small subunit               K01971     302      942     0.517      300     
ase:ACPL_519 DNA ligase (ATP)                           K01971     301      920     0.497      300     
amd:AMED_4197 ATP-dependent DNA ligase                  K01971     299      920     0.517      288     
sen:SACE_3549 DNA ligase (ATP)                          K01971     302      914     0.497      294     
nca:Noca_1237 ATP dependent DNA ligase                  K01971     304      874     0.515      293     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      728     0.439      303     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      722     0.429      289     
msm:MSMEG_5570 DNA ligase                               K01971     755      719     0.432      285     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770      710     0.412      306     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808      709     0.444      304     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      708     0.443      287     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      706     0.408      306     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      697     0.445      290     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      691     0.411      302     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      680     0.419      291     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      680     0.419      291     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      664     0.444      277     
mta:Moth_2067 conserved hypothetical protein            K01971     312      576     0.385      304     
chy:CHY_0025 conserved hypothetical protein             K01971     293      529     0.365      274     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      522     0.388      281     
phe:Phep_1702 DNA ligase D                              K01971     877      514     0.337      294     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      511     0.332      298     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      511     0.344      279     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      505     0.354      257     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      494     0.323      294     
sro:Sros_6714 DNA primase small subunit                            334      493     0.342      284     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      489     0.326      282     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      487     0.336      256     
xau:Xaut_4365 DNA ligase D                              K01971     886      485     0.333      285     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      484     0.341      276     
rpa:TX73_018915 DNA ligase D                            K01971     914      483     0.347      265     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      475     0.376      263     
sno:Snov_0819 DNA ligase D                              K01971     842      473     0.334      296     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      472     0.349      284     
scl:sce3523 unnamed protein product; High confidence in K01971     762      470     0.352      284     
swi:Swit_3982 DNA ligase D                              K01971     837      470     0.324      259     
pde:Pden_4186 conserved hypothetical protein            K01971     330      470     0.353      232     
rle:pRL120229 putative DNA ligase family protein        K01971     881      470     0.337      267     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      470     0.349      261     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      467     0.341      273     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901      467     0.335      269     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      466     0.338      266     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      465     0.365      255     
ssy:SLG_04290 putative DNA ligase                       K01971     835      464     0.316      282     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      462     0.350      280     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      458     0.333      288     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      456     0.330      282     
dsy:DSY0616 hypothetical protein                        K01971     818      456     0.344      276     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      453     0.310      277     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      447     0.327      281     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      447     0.330      267     
cpy:Cphy_1729 DNA ligase D                              K01971     813      441     0.325      271     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      440     0.306      265     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      423     0.340      256     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      420     0.341      255     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      409     0.301      292     
oih:OB3034 hypothetical conserved protein               K01971     595      394     0.320      272     
ppu:PP_3260 DNA ligase D                                K01971     833      385     0.337      249     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      372     0.327      251     
ksk:KSE_05320 hypothetical protein                      K01971     173      223     0.315      165     
vg:65133596 Gordonia phage Phlop; hypothetical protein             145      125     0.356      90      
smo:SELMODRAFT_78332 hypothetical protein               K22374     315      121     0.326      132     
spu:584514 sulfotransferase 1C2-like                    K01025     330      119     0.286      91      
cjc:108592425 LOW QUALITY PROTEIN: guanylate-binding pr K20899     494      114     0.206      141     
cpoc:100716538 src kinase-associated phosphoprotein 2   K23471     355      113     0.292      106     
ecu:ECU01_0770 uncharacterized protein                             205      113     0.395      43      
gga:418181 phosphatidylinositol 4-phosphate 3-kinase C2 K00923    1494      112     0.299      77      
ava:Ava_0323 probable glycosyl transferase                         324      111     0.317      82      
bth:BT_1682 SusD homolog                                K21572     651      111     0.294      102     
ola:101157719 calpain-5-like                            K08574     495      110     0.262      107     
sly:101247737 nerylneryl diphosphate synthase CPT2, chl            314      109     0.257      148     
mja:MJ_ECS07 hypothetical protein                                  441      108     0.221      231     
ana:alr0585 probable glycosyl transferase                          324      108     0.317      82      
ag:AFW98426 nerylneryl diphosphate synthase (EC:2.5.1.1 K22423     314      107     0.257      148     
sot:102592976 dimethylallylcistransferase, chloroplasti K11778     319      105     0.264      148     
hsa:4717 NADH dehydrogenase [ubiquinone] 1 subunit C1,  K03967      76      104     0.395      43      
ptr:461494 NADH dehydrogenase [ubiquinone] 1 subunit C1 K03967      76      104     0.395      43      
aci:ACIAD1038 conserved hypothetical protein; putative             283      103     0.236      165     
tcr:506621.30 ribonucleoside-diphosphate reductase smal K10808     337       98     0.245      147     
nme:NMB0898 hypothetical protein                                    62       98     0.410      39      
ssc:100037985 NADH dehydrogenase [ubiquinone] 1 subunit K03967      76       97     0.349      43      
ocu:103350693 NADH dehydrogenase [ubiquinone] 1 subunit K03967      76       95     0.372      43      
mgr:MGG_16252 hypothetical protein                                 112       90     0.328      67      

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