GFIT result for
pnl
|
GFIT result for
pnl
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| pnl:PNK_2195 (623 a.a.) |
-- |
K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > pcu:PC_RS08790(828) | 621 | 65.2 | 2844 | 2 | -- | K01971 | ligD | unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > puv:PUV_10690(794) | 623 | 53.5 | 2262 | 0 | -- | K01971 | ligD | putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fla:SY85_09220(907) | 656 | 49.7 | 2187 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gbm:Gbem_0128(871) | 655 | 51.0 | 2185 | 2 | -- | K01971 | ligD | ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gbn:GEOBRER4_01130(866) | 649 | 51.6 | 2180 | 2 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gpl:M1B72_21695(916) | 632 | 51.7 | 2177 | 11 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gem:GM21_0109(872) | 654 | 50.9 | 2172 | 1 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gsub:KP001_16080(856) | 639 | 51.2 | 2158 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ger:KP004_20250(900) | 635 | 50.6 | 2148 | 14 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > geo:Geob_0336(829) | 621 | 50.7 | 2130 | 1 | -- | K01971 | ligD | ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > geb:GM18_0111(892) | 652 | 50.0 | 2129 | 2 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fgg:FSB75_09325(904) | 655 | 48.5 | 2120 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nko:Niako_1577(934) | 679 | 48.3 | 2116 | 5 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nib:GU926_17365(839) | 631 | 49.4 | 2114 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gnt:KP003_20190(886) | 640 | 50.0 | 2110 | 8 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nso:NIASO_02455(845) | 624 | 49.7 | 2088 | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ruf:TH63_03090(857) | 635 | 48.7 | 2077 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chu:CHU_2837(896) | 661 | 48.1 | 2073 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > carh:EGY05_19215(622) | 617 | 49.6 | 2059 | 2 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cgn:OK18_05350(623) | 622 | 50.3 | 2059 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fpb:NLJ00_16410(849) | 627 | 50.7 | 2047 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > spdr:G6053_08675(900) | 639 | 47.7 | 2043 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dsn:HWI92_06210(910) | 654 | 48.6 | 2042 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agd:FRZ59_11550(885) | 663 | 49.2 | 2041 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cora:N0B40_18275(623) | 617 | 49.8 | 2037 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pex:IZT61_03730(899) | 654 | 48.0 | 2034 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > clac:EG342_02710(626) | 623 | 48.8 | 2032 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cpi:Cpin_0998(861) | 630 | 48.4 | 2028 | 3 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cdae:MUU74_07305(623) | 620 | 49.7 | 2026 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > crhi:KB553_12850(622) | 616 | 48.9 | 2024 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cben:EG339_03185(622) | 616 | 48.7 | 2020 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mup:A0256_05625(914) | 659 | 47.5 | 2020 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smui:I6J00_01330(899) | 641 | 47.7 | 2016 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cpip:CJF12_16755(628) | 623 | 48.6 | 2015 | 3 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chrj:CHRYMOREF3P_2387(623) | 619 | 49.4 | 2014 | 0 | <- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccas:EIB73_02615(852) | 633 | 47.1 | 2013 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccau:EG346_09160(623) | 622 | 49.0 | 2013 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cgle:NCTC11432_02809(623) | 620 | 48.9 | 2012 | 1 | <- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbp:EB354_08915(625) | 623 | 49.1 | 2009 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > phe:Phep_1702(877) | 662 | 47.9 | 2009 | 1 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cnk:EG343_11590(627) | 621 | 48.8 | 2003 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cil:EG358_18930(629) | 623 | 49.0 | 2002 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbau:H1R16_11785(895) | 641 | 47.1 | 2000 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nia:A8C56_12060(855) | 632 | 48.4 | 1999 | 2 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sahn:JRG66_00755(807) | 624 | 47.9 | 1997 | 3 | -- | ligD; DNA ligase D | |||
| > fen:J0383_00790(862) | 633 | 49.3 | 1996 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ffl:HYN86_19795(853) | 631 | 49.1 | 1996 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fgi:OP10G_3151(680) | 648 | 47.1 | 1996 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kaq:L0B70_12100(910) | 645 | 47.3 | 1995 | 3 | -- | ligD; DNA ligase D | |||
| > cfil:MYF79_04960(846) | 629 | 46.6 | 1994 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cih:ATE47_13465(629) | 624 | 48.6 | 1994 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > proe:H9L23_08200(898) | 653 | 47.6 | 1994 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chry:CEY12_12005(623) | 622 | 48.9 | 1993 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pek:FFJ24_006755(898) | 653 | 47.5 | 1992 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chih:GWR21_20550(855) | 629 | 47.4 | 1991 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ctai:NCTC12078_02832(620) | 617 | 48.3 | 1991 | 1 | <- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sbx:CA265_06915(898) | 653 | 47.0 | 1989 | 2 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cio:CEQ15_15855(625) | 619 | 48.5 | 1988 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fjo:Fjoh_3303(855) | 635 | 48.3 | 1988 | 1 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chrc:QGN23_02655(?) | 629 | 47.1 | 1986 | 0 | -- | - | |||
| > cnp:M0D58_09040(626) | 623 | 48.2 | 1986 | 2 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > csac:SIO70_22240(?) | 699 | 46.5 | 1986 | 0 | -- | - | |||
| > gfl:GRFL_2087(804) | 623 | 45.9 | 1985 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fjg:BB050_02761(853) | 637 | 49.1 | 1984 | 2 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kfa:Q73A0000_03135(850) | 631 | 46.6 | 1983 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mgk:FSB76_28040(904) | 655 | 46.4 | 1980 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > muh:HYN43_006135(908) | 653 | 47.8 | 1979 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmuo:LOK61_07905(899) | 654 | 46.8 | 1978 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > muc:MuYL_0888(910) | 652 | 47.4 | 1977 | 1 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ctur:LNP04_08700(642) | 626 | 47.4 | 1975 | 2 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chra:F7R58_04555(897) | 641 | 45.9 | 1973 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fba:FIC_00895(896) | 644 | 46.4 | 1972 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > prk:H9N25_07075(898) | 653 | 47.3 | 1971 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smis:LDL76_08210(818) | 627 | 45.6 | 1971 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afla:FHG64_05770(821) | 625 | 47.0 | 1970 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kbe:J4771_01620(845) | 624 | 46.3 | 1968 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > stha:NCTC11429_05207(900) | 643 | 46.5 | 1968 | 2 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > anp:FK178_09475(818) | 625 | 46.6 | 1967 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cgam:PFY09_10240(626) | 620 | 48.1 | 1967 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > grs:C7S20_09415(822) | 627 | 46.4 | 1966 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > csha:EG350_02300(626) | 621 | 48.3 | 1965 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msab:SNE25_14925(?) | 655 | 46.4 | 1964 | 0 | -- | - | |||
| > cjg:NCTC13459_00547(845) | 627 | 45.8 | 1961 | 1 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ssiy:JVX97_10860(912) | 651 | 46.1 | 1960 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fhu:M0M44_22495(856) | 634 | 47.9 | 1959 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cant:NCTC13489_00767(844) | 628 | 46.3 | 1954 | 1 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > salt:AO058_01020(819) | 627 | 45.9 | 1954 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chf:KTO58_22580(858) | 626 | 47.3 | 1952 | 2 | -- | ligD; DNA ligase D | |||
| > chk:D4L85_04315(640) | 639 | 46.2 | 1952 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nyn:U0035_05110(?) | 650 | 45.8 | 1952 | 0 | -- | - | |||
| > lpal:LDL79_02040(809) | 623 | 45.9 | 1948 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > shg:Sph21_2578(905) | 656 | 46.3 | 1948 | 1 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > oli:FKG96_10260(905) | 656 | 46.2 | 1947 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sphn:BV902_20470(912) | 651 | 45.8 | 1945 | 1 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > csal:NBC122_02419(623) | 618 | 46.6 | 1944 | 1 | <- | K01971 | ligD | ligD_2; Multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dfe:Dfer_0365(902) | 647 | 46.4 | 1942 | 2 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > eze:KI430_02845(620) | 621 | 46.7 | 1942 | 1 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aev:EI546_03815(903) | 654 | 47.6 | 1941 | 6 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dpf:ON006_07675(?) | 651 | 46.5 | 1939 | 0 | -- | - | |||
| > fbi:L0669_15115(854) | 635 | 47.4 | 1938 | 3 | -- | ligD; DNA ligase D | |||