KEGG   PATHWAY: osa00010
Entry
osa00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Oryza sativa japonica (Japanese rice)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
osa00010  Glycolysis / Gluconeogenesis
osa00010

Module
osa_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:osa00010]
osa_M00002  Glycolysis, core module involving three-carbon compounds [PATH:osa00010]
osa_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:osa00010]
osa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:osa00010]
Other DBs
GO: 0006096 0006094
Organism
Oryza sativa japonica (Japanese rice) [GN:osa]
Gene
107275630  HXK10; hexokinase-10 [KO:K00844] [EC:2.7.1.1]
107277365  FBA2; fructose-bisphosphate aldolase 2, cytoplasmic [KO:K01623] [EC:4.1.2.13]
136356546  [KO:K00002] [EC:1.1.1.2]
4324066  [KO:K01568] [EC:4.1.1.1]
4324263  [KO:K00873] [EC:2.7.1.40]
4324666  HXK5; hexokinase-9 [KO:K00844] [EC:2.7.1.1]
4325027  AldC-1; fructose-bisphosphate aldolase 3, cytoplasmic [KO:K01623] [EC:4.1.2.13]
4325071  CFBP1; fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
4325211  OsJ_00367; triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
4326074  [KO:K01623] [EC:4.1.2.13]
4326516  HXK3; hexokinase-3 [KO:K00844] [EC:2.7.1.1]
4326547  HXK2; hexokinase-6 [KO:K00844] [EC:2.7.1.1]
4326776  HXK4; hexokinase-8 [KO:K00844] [EC:2.7.1.1]
4326849  [KO:K00382] [EC:1.8.1.4]
4326980  [KO:K00382] [EC:1.8.1.4]
4327164  [KO:K01792] [EC:5.1.3.15]
4327173  [KO:K00873] [EC:2.7.1.40]
4327196  [KO:K00850] [EC:2.7.1.11]
4327301  [KO:K00850] [EC:2.7.1.11]
4327400  [KO:K01803] [EC:5.3.1.1]
4327475  [KO:K00002] [EC:1.1.1.2]
4327476  [KO:K00002] [EC:1.1.1.2]
4327493  [KO:K15633] [EC:5.4.2.12]
4328010  [KO:K00627] [EC:2.3.1.12]
4328012  [KO:K00016] [EC:1.1.1.27]
4328435  [KO:K00927] [EC:2.7.2.3]
4328446  [KO:K00134] [EC:1.2.1.12]
4328481  [KO:K01792] [EC:5.1.3.15]
4329518  [KO:K01895] [EC:6.2.1.1]
4329753  [KO:K01785] [EC:5.1.3.3]
4329892  GAPC3; glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic [KO:K00134] [EC:1.2.1.12]
4330090  [KO:K00001] [EC:1.1.1.1]
4330146  [KO:K00128] [EC:1.2.1.3]
4330149  [KO:K00128] [EC:1.2.1.3]
4330512  [KO:K00895] [EC:2.7.1.90]
4330612  [KO:K00128] [EC:1.2.1.3]
4330673  OsJ_08320; pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [KO:K00161] [EC:1.2.4.1]
4330747  [KO:K01834] [EC:5.4.2.11]
4331130  FALDH; alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
4331893  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
4331894  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
4332253  [KO:K01689] [EC:4.2.1.11]
4332293  [KO:K01610] [EC:4.1.1.49]
4332356  [KO:K01689] [EC:4.2.1.11]
4332364  FBPase; fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
4332519  PDC; pyruvate decarboxylase 2 [KO:K01568] [EC:4.1.1.1]
4332592  [KO:K01913] [EC:6.2.1.1 6.2.1.2]
4332593  [KO:K01913] [EC:6.2.1.1 6.2.1.2]
4332728  [KO:K15633] [EC:5.4.2.12]
4332976  [KO:K01785] [EC:5.1.3.3]
4333181  CPDK2; pyruvate, phosphate dikinase 2 isoform 1 [KO:K01006] [EC:2.7.9.1]
4333564  OsJ_11888; pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic [KO:K00162] [EC:1.2.4.1]
4333694  [KO:K00873] [EC:2.7.1.40]
4333895  [KO:K01835] [EC:5.4.2.2]
4334290  GPI-A; glucose-6-phosphate isomerase, cytosolic A [KO:K01810] [EC:5.3.1.9]
4334577  [KO:K03103] [EC:3.1.3.62 3.1.3.80]
4334968  OsJ_13591; pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic [KO:K00161] [EC:1.2.4.1]
4335745  [KO:K01895] [EC:6.2.1.1]
4336037  [KO:K01785] [EC:5.1.3.3]
4336039  [KO:K01785] [EC:5.1.3.3]
4336113  [KO:K00850] [EC:2.7.1.11]
4336216  GAPC2; glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [KO:K00134] [EC:1.2.1.12]
4336538  [KO:K00128] [EC:1.2.1.3]
4337265  [KO:K01792] [EC:5.1.3.15]
4337406  [KO:K00873] [EC:2.7.1.40]
4337862  [KO:K00382] [EC:1.8.1.4]
4337881  [KO:K00382] [EC:1.8.1.4]
4338010  HXK6; hexokinase-7 [KO:K00844] [EC:2.7.1.1]
4338034  [KO:K00850] [EC:2.7.1.11]
4338737  FBA1; fructose-bisphosphate aldolase 1, cytoplasmic [KO:K01623] [EC:4.1.2.13]
4338750  cpdK; pyruvate, phosphate dikinase 1, chloroplastic [KO:K01006] [EC:2.7.9.1]
4338912  [KO:K03841] [EC:3.1.3.11]
4338987  [KO:K00002] [EC:1.1.1.2]
4339066  PDC; pyruvate decarboxylase 1 [KO:K01568] [EC:4.1.1.1]
4339068  [KO:K01568] [EC:4.1.1.1]
4339090  [KO:K00002] [EC:1.1.1.2]
4339133  [KO:K15633] [EC:5.4.2.12]
4339204  [KO:K00927] [EC:2.7.2.3]
4339361  HXK5; hexokinase-5 [KO:K00844] [EC:2.7.1.1]
4339369  [KO:K00850] [EC:2.7.1.11]
4339420  HXK2; hexokinase-2 [KO:K00844] [EC:2.7.1.1]
4339654  [KO:K01792] [EC:5.1.3.15]
4339856  [KO:K00016] [EC:1.1.1.27]
4339859  [KO:K00627] [EC:2.3.1.12]
4340042  [KO:K01689] [EC:4.2.1.11]
4340153  [KO:K00850] [EC:2.7.1.11]
4340640  PDHE1-A; pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [KO:K00161] [EC:1.2.4.1]
4340643  [KO:K00895] [EC:2.7.1.90]
4340677  GPI-B; glucose-6-phosphate isomerase, cytosolic B [KO:K01810] [EC:5.3.1.9]
4340725  [KO:K00128] [EC:1.2.1.3]
4340909  [KO:K00895] [EC:2.7.1.90]
4341113  [KO:K00627] [EC:2.3.1.12]
4341496  [KO:K01623] [EC:4.1.2.13]
4341770  [KO:K03841] [EC:3.1.3.11]
4341782  [KO:K00134] [EC:1.2.1.12]
4341792  [KO:K00927] [EC:2.7.2.3]
4342564  [KO:K00873] [EC:2.7.1.40]
4342654  HXK4; hexokinase-4, chloroplastic [KO:K00844] [EC:2.7.1.1]
4343003  [KO:K00627] [EC:2.3.1.12]
4343113  HXK1; hexokinase-1 [KO:K00844] [EC:2.7.1.1]
4343942  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
4344382  PDC; pyruvate decarboxylase 3 [KO:K01568] [EC:4.1.1.1]
4344545  [KO:K01623] [EC:4.1.2.13]
4344564  GAPC; glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic [KO:K00134] [EC:1.2.1.12]
4345338  [KO:K00895] [EC:2.7.1.90]
4345640  [KO:K00627] [EC:2.3.1.12]
4345685  [KO:K00131] [EC:1.2.1.9]
4345842  [KO:K01810] [EC:5.3.1.9]
4346159  OsJ_28086; pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial [KO:K00162] [EC:1.2.4.1]
4346383  [KO:K01785] [EC:5.1.3.3]
4346747  [KO:K01792] [EC:5.1.3.15]
4346906  [KO:K01689] [EC:4.2.1.11]
4347022  [KO:K00627] [EC:2.3.1.12]
4347060  [KO:K00850] [EC:2.7.1.11]
4347172  [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
4347311  [KO:K01810] [EC:5.3.1.9]
4347383  [KO:K00850] [EC:2.7.1.11]
4347531  OsJ_29962; pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial [KO:K00162] [EC:1.2.4.1]
4347691  [KO:K01803] [EC:5.3.1.1]
4348138  [KO:K01785] [EC:5.1.3.3]
4348152  [KO:K00001] [EC:1.1.1.1]
4348176  AD709; enolase [KO:K01689] [EC:4.2.1.11]
4348230  [KO:K01835] [EC:5.4.2.2]
4348268  [KO:K01610] [EC:4.1.1.49]
4348582  [KO:K00850] [EC:2.7.1.11]
4348728  [KO:K00927] [EC:2.7.2.3]
4349454  [KO:K00873] [EC:2.7.1.40]
4349774  OsJ_32969; pyruvate kinase 1, cytosolic [KO:K00873] [EC:2.7.1.40]
4349897  ALDP; fructose-bisphosphate aldolase, chloroplastic [KO:K01623] [EC:4.1.2.13]
4349966  [KO:K00128] [EC:1.2.1.3]
4350053  ADH1; alcohol dehydrogenase 1 [KO:K18857] [EC:1.1.1.1]
4350054  adh2; alcohol dehydrogenase 2 [KO:K18857] [EC:1.1.1.1]
4350055  [KO:K18857] [EC:1.1.1.1]
4350078  [KO:K00873] [EC:2.7.1.40]
4351493  OsJ_35209; pyruvate kinase 2, cytosolic [KO:K00873] [EC:2.7.1.40]
4351678  [KO:K00627] [EC:2.3.1.12]
4352803  [KO:K00162] [EC:1.2.4.1]
9268592  [KO:K00927] [EC:2.7.2.3]
9268618  [KO:K01792] [EC:5.1.3.15]
9269126  [KO:K01792] [EC:5.1.3.15]
9270925  [KO:K15634] [EC:5.4.2.11]
9271186  [KO:K00128] [EC:1.2.1.3]
9271397  [KO:K00002] [EC:1.1.1.2]
9271821  [KO:K00895] [EC:2.7.1.90]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
osa00020  Citrate cycle (TCA cycle)
osa00030  Pentose phosphate pathway
osa00500  Starch and sucrose metabolism
osa00620  Pyruvate metabolism
osa00640  Propanoate metabolism
osa00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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