Entry
Name
Lysosome - Carassius auratus (goldfish)
Description
Lysosomes are membrane-delimited organelles in animal cells serving as the cell's main digestive compartment to which all sorts of macromolecules are delivered for degradation. They contain more than 40 hydrolases in an acidic environment (pH of about 5). After synthesis in the ER, lysosomal enzymes are decorated with mannose-6-phosphate residues, which are recognized by mannose-6-phosphate receptors in the trans-Golgi network. They are packaged into clathrin-coated vesicles and are transported to late endosomes. Substances for digestion are acquired by the lysosomes via a series of processes including endocytosis, phagocytosis, and autophagy.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Carassius auratus (goldfish) [GN:
caua ]
Gene
113054119 V-type proton ATPase 116 kDa subunit a-like isoform X1 [KO:K02154 ]
113043417 V-type proton ATPase 116 kDa subunit a-like isoform X1 [KO:K02154 ]
113097524 V-type proton ATPase 116 kDa subunit a-like isoform X1 [KO:K02154 ]
113110385 V-type proton ATPase 116 kDa subunit a-like isoform X1 [KO:K02154 ]
113046924 V-type proton ATPase 116 kDa subunit a-like isoform X1 [KO:K02154 ]
113091437 V-type proton ATPase 116 kDa subunit a-like isoform X1 [KO:K02154 ]
113057877 lysosome-associated membrane glycoprotein 2-like isoform X1 [KO:K06528 ]
113054923 natural resistance-associated macrophage protein 2-like [KO:K21398 ]
113068166 natural resistance-associated macrophage protein 2-like [KO:K21398 ]
113049876 ATP-binding cassette sub-family A member 2-like isoform X1 [KO:K05642 ]
113091322 ATP-binding cassette sub-family A member 2-like isoform X1 [KO:K05642 ]
113056097 major facilitator superfamily domain-containing protein 8 isoform X1 [KO:K12307 ]
113038529 major facilitator superfamily domain-containing protein 8-like [KO:K12307 ]
113039767 major facilitator superfamily domain-containing protein 8-like [KO:K12307 ]
113111853 major facilitator superfamily domain-containing protein 8-like [KO:K12307 ]
113092776 gnptg; N-acetylglucosamine-1-phosphotransferase subunit gamma [KO:K10087 ]
113120488 LOW QUALITY PROTEIN: cation-independent mannose-6-phosphate receptor-like [KO:K06564 ]
113067368 ADP-ribosylation factor-binding protein GGA3-like isoform X1 [KO:K12404 ]
113067855 ADP-ribosylation factor-binding protein GGA3-like isoform X1 [KO:K12404 ]
113097954 ADP-ribosylation factor-binding protein GGA3-like isoform X1 [KO:K12404 ]
113075113 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [KO:K19363 ]
113054306 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [KO:K19363 ]
113067808 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog isoform X1 [KO:K19363 ]
113067811 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog isoform X1 [KO:K19363 ]
113049846 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [KO:K19363 ]
113056975 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog isoform X1 [KO:K19363 ]
113057135 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog isoform X1 [KO:K19363 ]
113097629 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [KO:K19363 ]
113044801 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [KO:K19363 ]
113071528 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [KO:K19363 ]
113105402 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [KO:K19363 ]
Compound
Reference
Authors
Eskelinen EL, Tanaka Y, Saftig P
Title
At the acidic edge: emerging functions for lysosomal membrane proteins.
Journal
Reference
Authors
Neufeld EF
Title
Lysosomal storage diseases.
Journal
Reference
Authors
von Figura K, Hasilik A
Title
Lysosomal enzymes and their receptors.
Journal
Reference
Authors
Janvier K, Bonifacino JS
Title
Role of the endocytic machinery in the sorting of lysosome-associated membrane proteins.
Journal
Reference
Authors
Vergarajauregui S, Puertollano R
Title
Mucolipidosis type IV: the importance of functional lysosomes for efficient autophagy.
Journal
Reference
Authors
Jaskolka MC, Winkley SR, Kane PM
Title
RAVE and Rabconnectin-3 Complexes as Signal Dependent Regulators of Organelle Acidification.
Journal
Reference
Authors
Majdoul S, Compton AA
Title
Lessons in self-defence: inhibition of virus entry by intrinsic immunity.
Journal
Related pathway
caua04130 SNARE interactions in vesicular transport
KO pathway
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