KEGG   PATHWAY: ncs03040
Entry
ncs03040                    Pathway                                
Name
Spliceosome - Naumovozyma castellii
Description
After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.
Class
Genetic Information Processing; Transcription
Pathway map
ncs03040  Spliceosome
ncs03040

Other DBs
GO: 0005681
Organism
Naumovozyma castellii [GN:ncs]
Gene
NCAS_0H01280  NCAS0H01280; hypothetical protein [KO:K12811] [EC:5.6.2.7]
NCAS_0A04650  NCAS0A04650; hypothetical protein [KO:K12814] [EC:5.6.2.6]
NCAS_0A03280  NCAS0A03280; hypothetical protein [KO:K12815] [EC:5.6.2.6]
NCAS_0F03340  NCAS0F03340; hypothetical protein [KO:K12816]
NCAS_0A05180  NCAS0A05180; hypothetical protein [KO:K12817]
NCAS_0E02060  NCAS0E02060; hypothetical protein [KO:K12818] [EC:5.6.2.6]
NCAS_0B04060  NCAS0B04060; hypothetical protein [KO:K12819]
NCAS_0D03300  NCAS0D03300; hypothetical protein [KO:K12820] [EC:5.6.2.6]
NCAS_0F03750  NCAS0F03750; hypothetical protein [KO:K11086]
NCAS_0B05250  NCAS0B05250; hypothetical protein [KO:K11087]
NCAS_0D02930  NCAS0D02930; hypothetical protein [KO:K11096]
NCAS_0C03090  NCAS0C03090; hypothetical protein [KO:K11088]
NCAS_0H02460  NCAS0H02460; hypothetical protein [KO:K11097]
NCAS_0A15220  NCAS0A15220; hypothetical protein [KO:K11098]
NCAS_0C03930  NCAS0C03930; hypothetical protein [KO:K11099]
NCAS_0E03280  NCAS0E03280; hypothetical protein [KO:K11093]
NCAS_0D03090  NCAS0D03090; hypothetical protein [KO:K11095]
NCAS_0C05110  NCAS0C05110; hypothetical protein [KO:K12821]
NCAS_0G02560  NCAS0G02560; hypothetical protein [KO:K12823] [EC:5.6.2.7]
NCAS_0A01020  NCAS0A01020; hypothetical protein [KO:K11092]
NCAS_0J02340  NCAS0J02340; hypothetical protein [KO:K12825]
NCAS_0I02170  NCAS0I02170; hypothetical protein [KO:K12826]
NCAS_0C03540  NCAS0C03540; hypothetical protein [KO:K12827]
NCAS_0F02230  NCAS0F02230; hypothetical protein [KO:K12828]
NCAS_0C00780  NCAS0C00780; hypothetical protein [KO:K12829]
NCAS_0G03340  NCAS0G03340; hypothetical protein [KO:K12830]
NCAS_0B00950  NCAS0B00950; hypothetical protein [KO:K12831]
NCAS_0G02260  NCAS0G02260; hypothetical protein [KO:K12832]
NCAS_0A11360  NCAS0A11360; hypothetical protein [KO:K12834]
NCAS_0H03230  NCAS0H03230; hypothetical protein [KO:K12837]
NCAS_0B04420  NCAS0B04420; hypothetical protein [KO:K12621]
NCAS_0J01950  NCAS0J01950; hypothetical protein [KO:K12622]
NCAS_0A14510  NCAS0A14510; hypothetical protein [KO:K12623]
NCAS_0A03890  NCAS0A03890; hypothetical protein [KO:K12624]
NCAS_0A11810  NCAS0A11810; hypothetical protein [KO:K12625]
NCAS_0B07110  NCAS0B07110; hypothetical protein [KO:K12626]
NCAS_0D01690  NCAS0D01690; hypothetical protein [KO:K12627]
NCAS_0A08110  NCAS0A08110; hypothetical protein [KO:K12843]
NCAS_0A15170  NCAS0A15170; hypothetical protein [KO:K12662]
NCAS_0E01160  NCAS0E01160; hypothetical protein [KO:K12844]
NCAS_0A08350  NCAS0A08350; hypothetical protein [KO:K12845]
NCAS_0B04730  NCAS0B04730; hypothetical protein [KO:K12847]
NCAS_0B00860  NCAS0B00860; hypothetical protein [KO:K11984]
NCAS_0B05880  NCAS0B05880; hypothetical protein [KO:K12848]
NCAS_0C00360  NCAS0C00360; hypothetical protein [KO:K12851]
NCAS_0B08340  NCAS0B08340; hypothetical protein [KO:K12853]
NCAS_0B04870  NCAS0B04870; hypothetical protein [KO:K12854] [EC:5.6.2.6]
NCAS_0A10540  NCAS0A10540; hypothetical protein [KO:K12855]
NCAS_0D01400  NCAS0D01400; hypothetical protein [KO:K12856]
NCAS_0B02570  NCAS0B02570; hypothetical protein [KO:K12858] [EC:5.6.2.7]
NCAS_0A11270  NCAS0A11270; hypothetical protein [KO:K12859]
NCAS_0C01050  NCAS0C01050; hypothetical protein [KO:K12860]
NCAS_0C01680  NCAS0C01680; hypothetical protein [KO:K12862]
NCAS_0B03350  NCAS0B03350; hypothetical protein [KO:K12863]
NCAS_0G01560  NCAS0G01560; hypothetical protein [KO:K03283]
NCAS_0E02580  NCAS0E02580; hypothetical protein [KO:K03283]
NCAS_0C05760  NCAS0C05760; hypothetical protein [KO:K03283]
NCAS_0D00240  NCAS0D00240; hypothetical protein [KO:K03283]
NCAS_0A14440  NCAS0A14440; hypothetical protein [KO:K03283]
NCAS_0B05150  NCAS0B05150; hypothetical protein [KO:K06063]
NCAS_0A12160  NCAS0A12160; hypothetical protein [KO:K12867]
NCAS_0E00820  NCAS0E00820; hypothetical protein [KO:K12868]
NCAS_0C03340  NCAS0C03340; hypothetical protein [KO:K12869]
NCAS_0A13020  NCAS0A13020; hypothetical protein [KO:K12870]
NCAS_0I01570  NCAS0I01570; hypothetical protein [KO:K12872]
NCAS_0D04520  NCAS0D04520; hypothetical protein [KO:K12873]
NCAS_0A10430  NCAS0A10430; hypothetical protein [KO:K13025] [EC:5.6.2.7]
NCAS_0G02250  NCAS0G02250; hypothetical protein [KO:K12879]
NCAS_0A00740  NCAS0A00740; hypothetical protein [KO:K12880]
NCAS_0A11840  NCAS0A11840; hypothetical protein [KO:K12881]
NCAS_0A04130  NCAS0A04130; hypothetical protein [KO:K12882]
NCAS_0F01920  NCAS0F01920; hypothetical protein [KO:K12882]
NCAS_0D03580  NCAS0D03580; hypothetical protein [KO:K12883]
Reference
  Authors
Wahl MC, Will CL, Luhrmann R
  Title
The spliceosome: design principles of a dynamic RNP machine.
  Journal
Cell 136:701-18 (2009)
DOI:10.1016/j.cell.2009.02.009
Reference
  Authors
Morris DP, Greenleaf AL
  Title
The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II.
  Journal
J Biol Chem 275:39935-43 (2000)
DOI:10.1074/jbc.M004118200
Reference
  Authors
Chen YI, Moore RE, Ge HY, Young MK, Lee TD, Stevens SW
  Title
Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors.
  Journal
Nucleic Acids Res 35:3928-44 (2007)
DOI:10.1093/nar/gkm347
Reference
  Authors
Ritchie DB, Schellenberg MJ, MacMillan AM
  Title
Spliceosome structure: piece by piece.
  Journal
Biochim Biophys Acta 1789:624-33 (2009)
DOI:10.1016/j.bbagrm.2009.08.010
KO pathway
ko03040   
LinkDB

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