KEGG   PATHWAY: pleu04146
Entry
pleu04146                   Pathway                                
Name
Peroxisome - Peromyscus leucopus (white-footed mouse)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
pleu04146  Peroxisome
pleu04146

Other DBs
GO: 0005777
Organism
Peromyscus leucopus (white-footed mouse) [GN:pleu]
Gene
114699712  Pex16; peroxisomal biogenesis factor 16 [KO:K13335]
114686726  Pex3; peroxisomal biogenesis factor 3 [KO:K13336]
114690698  Pex19; peroxisomal biogenesis factor 19 isoform X1 [KO:K13337]
114700451  Abcd3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
114688216  Pex1; peroxisome biogenesis factor 1 isoform X1 [KO:K13338]
114705346  Pex6; peroxisome biogenesis factor 6 [KO:K13339]
114700732  Pex26; peroxisome assembly protein 26 isoform X1 [KO:K13340]
114708783  Pex5; peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
114695347  Pex5l; PEX5-related protein isoform X1 [KO:K13342]
114709674  Pex14; peroxisomal membrane protein PEX14 [KO:K13343]
114697955  Pex13; peroxisome biogenesis factor 13 [KO:K13344]
114707712  Pex12; peroxisome assembly protein 12 isoform X1 [KO:K13345]
114708245  Pex10; peroxisome biogenesis factor 10 isoform X1 [KO:K13346]
114696356  Pex2; peroxisome biogenesis factor 2 [KO:K06664]
114682905  Pxmp2; peroxisomal membrane protein 2 isoform X1 [KO:K13347]
114688967  Mpv17l2; LOW QUALITY PROTEIN: mpv17-like protein 2 [KO:K13348]
114696810  Mpv17; protein Mpv17 isoform X1 [KO:K13348]
114683986  Mpv17l; mpv17-like protein isoform X1 [KO:K13349]
114706530  Pxmp4; peroxisomal membrane protein 4 [KO:K13350]
114696171  Pex11a; peroxisomal membrane protein 11A [KO:K13351]
114680917  Pex11b; peroxisomal membrane protein 11B isoform X1 [KO:K13352]
114683183  Pex11g; peroxisomal membrane protein 11C isoform X1 [KO:K13353]
114704444  peroxisomal membrane protein PMP34-like [KO:K13354]
114694294  Slc25a17; peroxisomal membrane protein PMP34 isoform X1 [KO:K13354]
114708165  Hacl1; 2-hydroxyacyl-CoA lyase 1 [KO:K12261] [EC:4.1.2.63]
114710792  Amacr; alpha-methylacyl-CoA racemase [KO:K01796] [EC:5.1.99.4]
114708537  Phyh; phytanoyl-CoA dioxygenase, peroxisomal [KO:K00477] [EC:1.14.11.18]
114707102  Acox1; peroxisomal acyl-coenzyme A oxidase 1 isoform X3 [KO:K00232] [EC:1.3.3.6]
114702051  Acox3; peroxisomal acyl-coenzyme A oxidase 3 isoform X1 [KO:K00232] [EC:1.3.3.6]
114680724  Acox2; peroxisomal acyl-coenzyme A oxidase 2 isoform X1 [KO:K10214] [EC:1.17.99.3]
114694768  Hsd17b4; peroxisomal multifunctional enzyme type 2 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
114706215  Scp2; non-specific lipid-transfer protein isoform X1 [KO:K08764] [EC:2.3.1.176]
114702315  Baat; bile acid-CoA:amino acid N-acyltransferase isoform X1 [KO:K00659] [EC:2.3.1.65 3.1.2.2]
114702326  LOW QUALITY PROTEIN: bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
114684255  Ehhadh; peroxisomal bifunctional enzyme [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
114684664  LOW QUALITY PROTEIN: peroxisomal bifunctional enzyme-like [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
114687893  peroxisomal bifunctional enzyme [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
114682502  LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase B, peroxisomal-like [KO:K07513] [EC:2.3.1.16]
114682509  3-ketoacyl-CoA thiolase B, peroxisomal [KO:K07513] [EC:2.3.1.16]
114681238  Decr2; peroxisomal 2,4-dienoyl-CoA reductase [KO:K13237] [EC:1.3.1.124]
114684700  Ech1; delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
114706187  Abcd1; ATP-binding cassette sub-family D member 1 [KO:K05675] [EC:7.6.2.4]
114693049  Abcd2; ATP-binding cassette sub-family D member 2 [KO:K05676] [EC:7.6.2.4]
114698185  Abcd4; lysosomal cobalamin transporter ABCD4 isoform X1 [KO:K05678] [EC:7.6.2.8]
114709078  Slc27a2; very long-chain acyl-CoA synthetase [KO:K08746] [EC:6.2.1.- 6.2.1.3]
114698329  Acsl4; long-chain-fatty-acid--CoA ligase 4 [KO:K01897] [EC:6.2.1.3]
114700394  Acsl6; long-chain-fatty-acid--CoA ligase 6 isoform X1 [KO:K01897] [EC:6.2.1.3]
114701182  Acsl1; long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
114703305  Acsl3; long-chain-fatty-acid--CoA ligase 3 [KO:K01897] [EC:6.2.1.3]
114697057  Acsl5; long-chain-fatty-acid--CoA ligase 5 [KO:K01897] [EC:6.2.1.3]
114693602  Pecr; peroxisomal trans-2-enoyl-CoA reductase [KO:K07753] [EC:1.3.1.38]
114701421  enoyl-CoA delta isomerase 2-like isoform X1 [KO:K13239] [EC:5.3.3.8]
114701439  enoyl-CoA delta isomerase 2 isoform X1 [KO:K13239] [EC:5.3.3.8]
114699812  Nudt12; peroxisomal NADH pyrophosphatase NUDT12 isoform X2 [KO:K03426] [EC:3.6.1.22]
114700190  Nudt13; nucleoside diphosphate-linked moiety X motif 13 isoform X1 [KO:K03426] [EC:3.6.1.22]
114698901  Nudt19; nucleoside diphosphate-linked moiety X motif 19 [KO:K13355] [EC:3.6.1.77]
114692624  Acot8; acyl-coenzyme A thioesterase 8 isoform X1 [KO:K11992] [EC:3.1.2.27]
114702726  Crat; carnitine O-acetyltransferase isoform X1 [KO:K00624] [EC:2.3.1.7]
114687552  Crot; peroxisomal carnitine O-octanoyltransferase isoform X2 [KO:K05940] [EC:2.3.1.137]
114697464  Mlycd; malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
114707134  Gnpat; dihydroxyacetone phosphate acyltransferase isoform X1 [KO:K00649] [EC:2.3.1.42]
114700816  Agps; alkyldihydroxyacetonephosphate synthase, peroxisomal [KO:K00803] [EC:2.5.1.26]
114697599  Far1; fatty acyl-CoA reductase 1 isoform X1 [KO:K13356] [EC:1.2.1.84]
114708867  Far2; fatty acyl-CoA reductase 2 [KO:K13356] [EC:1.2.1.84]
114681314  Mvk; mevalonate kinase [KO:K00869] [EC:2.7.1.36]
114707935  Pmvk; phosphomevalonate kinase isoform X1 [KO:K13273] [EC:2.7.4.2]
114707822  Agxt; serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
114686975  Dao; LOW QUALITY PROTEIN: D-amino-acid oxidase [KO:K00273] [EC:1.4.3.3]
114707515  Ddo; D-aspartate oxidase isoform X1 [KO:K00272] [EC:1.4.3.1]
114705065  Idh1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
114696177  Idh2; isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
114693348  Paox; peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 [KO:K00308] [EC:1.5.3.13]
114691481  Pipox; peroxisomal sarcosine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
114690269  Hmgcll1; 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic [KO:K01640] [EC:4.1.3.4]
114697231  Hmgcl; hydroxymethylglutaryl-CoA lyase, mitochondrial [KO:K01640] [EC:4.1.3.4]
114688753  hydroxyacid oxidase 2-like [KO:K11517] [EC:1.1.3.15]
114698557  hydroxyacid oxidase 2 [KO:K11517] [EC:1.1.3.15]
114703671  Hao1; hydroxyacid oxidase 1 isoform X1 [KO:K11517] [EC:1.1.3.15]
114699005  Cat; catalase [KO:K03781] [EC:1.11.1.6]
114680678  Prdx5; peroxiredoxin-5, mitochondrial [KO:K11187] [EC:1.11.1.24]
114698452  Sod1; LOW QUALITY PROTEIN: superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
114691380  Sod2; superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
114691518  Nos2; nitric oxide synthase, inducible [KO:K13241] [EC:1.14.13.39]
114681495  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
114682623  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
114707088  Prdx1; peroxiredoxin-1 [KO:K13279] [EC:1.11.1.24]
114695066  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
114709687  peroxiredoxin-1-like [KO:K13279] [EC:1.11.1.24]
114707310  Ephx2; bifunctional epoxide hydrolase 2 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
114698018  Gstk1; glutathione S-transferase kappa 1 [KO:K13299] [EC:2.5.1.18]
114696109  Xdh; LOW QUALITY PROTEIN: xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
114708717  dehydrogenase/reductase SDR family member 4 [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
pleu00071  Fatty acid degradation
pleu00120  Primary bile acid biosynthesis
pleu00230  Purine metabolism
pleu00564  Glycerophospholipid metabolism
pleu00565  Ether lipid metabolism
pleu00830  Retinol metabolism
pleu00900  Terpenoid backbone biosynthesis
pleu03320  PPAR signaling pathway
KO pathway
ko04146   
LinkDB

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