KEGG   PATHWAY: rcn03430
Entry
rcn03430                    Pathway                                
Name
Mismatch repair - Rosa chinensis (China rose)
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
rcn03430  Mismatch repair
rcn03430

Other DBs
GO: 0006298
Organism
Rosa chinensis (China rose) [GN:rcn]
Gene
112202111  endonuclease MutS2 isoform X1 [KO:K07456]
112176618  single-stranded DNA-binding protein, mitochondrial [KO:K03111]
112172217  DNA mismatch repair protein PMS1 isoform X1 [KO:K10858]
112178094  LOW QUALITY PROTEIN: DNA mismatch repair protein MLH1-like [KO:K08734]
112192964  DNA mismatch repair protein MLH1 isoform X1 [KO:K08734]
112176461  DNA mismatch repair protein MSH6 [KO:K08737]
112190849  DNA mismatch repair protein MSH7 [KO:K08737]
112180984  LOW QUALITY PROTEIN: DNA mismatch repair protein MSH2 [KO:K08735]
112176623  DNA mismatch repair protein MSH3 isoform X1 [KO:K08736]
112186854  DNA mismatch repair protein MLH3 isoform X6 [KO:K08739]
112164646  replication factor C subunit 1 [KO:K10754]
112173232  replication factor C subunit 4 [KO:K10755]
112176132  replication factor C subunit 2 [KO:K10755]
112187419  uncharacterized protein LOC112187419 [KO:K10756]
112168874  replication factor C subunit 3 [KO:K10756]
112195302  replication factor C subunit 3 [KO:K10756]
112194216  replication factor C subunit 3 [KO:K10756]
112168051  proliferating cell nuclear antigen [KO:K04802]
112170247  proliferating cell nuclear antigen [KO:K04802]
112165739  proliferating cell nuclear antigen [KO:K04802]
112166827  exonuclease 1 isoform X1 [KO:K10746] [EC:3.1.-.-]
112180415  exonuclease 1 [KO:K10746] [EC:3.1.-.-]
112176557  replication protein A 70 kDa DNA-binding subunit E [KO:K07466]
112184823  replication protein A 70 kDa DNA-binding subunit A [KO:K07466]
112179066  replication protein A 70 kDa DNA-binding subunit B [KO:K07466]
112172835  replication protein A 32 kDa subunit A isoform X1 [KO:K10739]
112196412  replication protein A 32 kDa subunit B [KO:K10739]
112193589  replication protein A 14 kDa subunit B [KO:K10740]
112187222  DNA polymerase delta catalytic subunit isoform X1 [KO:K02327] [EC:2.7.7.7]
112192174  DNA polymerase delta small subunit [KO:K02328]
112168381  uncharacterized protein LOC112168381 [KO:K03504]
112168379  nucleolar protein dao-5 isoform X1 [KO:K03504]
112203493  nucleolar protein dao-5 [KO:K03504]
112188178  DNA polymerase delta subunit 4 [KO:K03505]
112168234  DNA ligase 1 [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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