KEGG   PATHWAY: salp04146
Entry
salp04146                   Pathway                                
Name
Peroxisome - Salvelinus sp. IW2-2015 (Arctic char)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
salp04146  Peroxisome
salp04146

Other DBs
GO: 0005777
Organism
Salvelinus sp. IW2-2015 (Arctic char) [GN:salp]
Gene
111949918  [KO:K13241] [EC:1.14.13.39]
111949965  [KO:K12663] [EC:5.3.3.21]
111950284  [KO:K13273] [EC:2.7.4.2]
111950342  [KO:K01897] [EC:6.2.1.3]
111950708  [KO:K01897] [EC:6.2.1.3]
111950746  [KO:K11187] [EC:1.11.1.24]
111950942  [KO:K00306] [EC:1.5.3.1 1.5.3.7]
111950990  pex12; peroxisome assembly protein 12 [KO:K13345]
111951172  [KO:K05676] [EC:7.6.2.4]
111951426  [KO:K05676] [EC:7.6.2.4]
111952336  acox3; peroxisomal acyl-coenzyme A oxidase 3 isoform X1 [KO:K00232] [EC:1.3.3.6]
111952338  [KO:K13356] [EC:1.2.1.84]
111952613  pex11a; peroxisomal membrane protein 11A [KO:K13351]
111952699  pex11g; peroxisomal membrane protein 11C [KO:K13353]
111952885  [KO:K13342]
111952894  [KO:K01578] [EC:4.1.1.9]
111952967  [KO:K13348]
111953090  [KO:K00031] [EC:1.1.1.42]
111953324  [KO:K00232] [EC:1.3.3.6]
111953447  [KO:K00232] [EC:1.3.3.6]
111953488  [KO:K13239] [EC:5.3.3.8]
111954211  pex3; peroxisomal biogenesis factor 3 [KO:K13336]
111954372  gnpat; dihydroxyacetone phosphate acyltransferase [KO:K00649] [EC:2.3.1.42]
111954451  sod2; superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
111954924  pex1; peroxisome biogenesis factor 1 isoform X1 [KO:K13338]
111955033  [KO:K00624] [EC:2.3.1.7]
111955803  [KO:K13352]
111956336  [KO:K13342]
111956681  [KO:K13337]
111956689  [KO:K13279] [EC:1.11.1.24]
111956728  [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
111956766  [KO:K13348]
111956798  [KO:K05677] [EC:7.6.2.4]
111957514  [KO:K00624] [EC:2.3.1.7]
111957628  [KO:K00869] [EC:2.7.1.36]
111957687  dao; D-amino-acid oxidase isoform X1 [KO:K00273] [EC:1.4.3.3]
111957691  [KO:K01897] [EC:6.2.1.3]
111957981  pxmp2; peroxisomal membrane protein 2 [KO:K13347]
111957991  [KO:K01897] [EC:6.2.1.3]
111959543  [KO:K11517] [EC:1.1.3.15]
111960558  [KO:K03781] [EC:1.11.1.6]
111960692  [KO:K13339]
111960712  [KO:K00306] [EC:1.5.3.1 1.5.3.7]
111960727  nos2; nitric oxide synthase, inducible isoform X1 [KO:K13241] [EC:1.14.13.39]
111961399  amacr; alpha-methylacyl-CoA racemase isoform X1 [KO:K01796] [EC:5.1.99.4]
111961896  crat; carnitine O-acetyltransferase [KO:K00624] [EC:2.3.1.7]
111962004  [KO:K03781] [EC:1.11.1.6]
111962339  [KO:K01578] [EC:4.1.1.9]
111962433  [KO:K00031] [EC:1.1.1.42]
111962660  [KO:K13356] [EC:1.2.1.84]
111963173  [KO:K01640] [EC:4.1.3.4]
111963365  hao1; hydroxyacid oxidase 1 isoform X2 [KO:K11517] [EC:1.1.3.15]
111963524  ddo; D-aspartate oxidase isoform X1 [KO:K00272] [EC:1.4.3.1]
111964182  [KO:K11187] [EC:1.11.1.24]
111964458  [KO:K04565] [EC:1.15.1.1]
111964685  [KO:K13342]
111964845  gstk1; glutathione S-transferase kappa 1 [KO:K13299] [EC:2.5.1.18]
111965035  [KO:K13273] [EC:2.7.4.2]
111965235  pex5; peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
111965990  [KO:K01897] [EC:6.2.1.3]
111966482  pex14; peroxisomal membrane protein PEX14 [KO:K13343]
111967298  [KO:K01897] [EC:6.2.1.3]
111968095  [KO:K01640] [EC:4.1.3.4]
111968819  [KO:K01640] [EC:4.1.3.4]
111970670  pxmp4; peroxisomal membrane protein 4 [KO:K13350]
111971452  hacl1; 2-hydroxyacyl-CoA lyase 1 [KO:K12261] [EC:4.1.2.63]
111971531  acsl1; long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
111972033  [KO:K08746] [EC:6.2.1.- 6.2.1.3]
111972963  pex2; peroxisome biogenesis factor 2 [KO:K06664]
111973017  pex7; peroxisomal biogenesis factor 7 [KO:K13341]
111973127  abcd4; LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 4 [KO:K05678] [EC:7.6.2.8]
111973374  [KO:K13239] [EC:5.3.3.8]
111973436  [KO:K05677] [EC:7.6.2.4]
111973685  [KO:K01897] [EC:6.2.1.3]
111974039  hsd17b4; peroxisomal multifunctional enzyme type 2 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
111974242  [KO:K00869] [EC:2.7.1.36]
111974609  nudt12; peroxisomal NADH pyrophosphatase NUDT12 [KO:K03426] [EC:3.6.1.22]
111974630  [KO:K00624] [EC:2.3.1.7]
111975508  agps; LOW QUALITY PROTEIN: alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X1 [KO:K00803] [EC:2.5.1.26]
111975901  [KO:K13342]
111976326  pex10; LOW QUALITY PROTEIN: peroxisome biogenesis factor 10 [KO:K13346]
111976757  [KO:K00031] [EC:1.1.1.42]
111977440  nudt13; nucleoside diphosphate-linked moiety X motif 13 isoform X1 [KO:K03426] [EC:3.6.1.22]
111977778  acsl5; LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase 5 [KO:K01897] [EC:6.2.1.3]
111978161  [KO:K01640] [EC:4.1.3.4]
111978551  decr2; peroxisomal 2,4-dienoyl-CoA reductase isoform X1 [KO:K13237] [EC:1.3.1.124]
111978731  [KO:K11517] [EC:1.1.3.15]
111979049  [KO:K01897] [EC:6.2.1.3]
111979317  [KO:K13337]
111979412  [KO:K13279] [EC:1.11.1.24]
111979484  [KO:K05677] [EC:7.6.2.4]
111979999  [KO:K00306] [EC:1.5.3.1 1.5.3.7]
111980024  [KO:K01796] [EC:5.1.99.4]
111980457  [KO:K01897] [EC:6.2.1.3]
111980843  slc25a17; peroxisomal membrane protein PMP34 [KO:K13354]
111981140  [KO:K13279] [EC:1.11.1.24]
111981303  [KO:K01897] [EC:6.2.1.3]
111982342  [KO:K13340]
111982352  [KO:K13340]
111982414  [KO:K03781] [EC:1.11.1.6]
112068130  mpv17; LOW QUALITY PROTEIN: protein Mpv17 [KO:K13348]
112068421  [KO:K01897] [EC:6.2.1.3]
112068695  [KO:K01897] [EC:6.2.1.3]
112069114  [KO:K11147] [EC:1.1.-.-]
112069433  [KO:K00803] [EC:2.5.1.26]
112069550  [KO:K08764] [EC:2.3.1.176]
112070136  [KO:K00031] [EC:1.1.1.42]
112070392  [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
112070900  nudt7; peroxisomal coenzyme A diphosphatase NUDT7 [KO:K17879] [EC:3.6.1.77]
112070947  paox; peroxisomal N(1)-acetyl-spermine/spermidine oxidase [KO:K00308] [EC:1.5.3.13]
112071651  ephx2; bifunctional epoxide hydrolase 2 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
112071841  [KO:K00106] [EC:1.17.1.4 1.17.3.2]
112072437  acot8; acyl-coenzyme A thioesterase 8 [KO:K11992] [EC:3.1.2.27]
112072726  phyh; phytanoyl-CoA dioxygenase, peroxisomal [KO:K00477] [EC:1.14.11.18]
112072775  [KO:K13346]
112072998  ehhadh; peroxisomal bifunctional enzyme [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
112073212  [KO:K13349]
112073664  mpv17l; mpv17-like protein [KO:K13349]
112074426  [KO:K05675] [EC:7.6.2.4]
112074990  [KO:K13356] [EC:1.2.1.84]
112075829  nudt19; LOW QUALITY PROTEIN: nucleoside diphosphate-linked moiety X motif 19 [KO:K13355] [EC:3.6.1.77]
112076337  [KO:K04565] [EC:1.15.1.1]
112076835  acaa1; 3-ketoacyl-CoA thiolase, peroxisomal [KO:K07513] [EC:2.3.1.16]
112076944  pex16; peroxisomal biogenesis factor 16 isoform X1 [KO:K13335]
112076968  [KO:K00649] [EC:2.3.1.42]
112077972  [KO:K05940] [EC:2.3.1.137]
112078257  [KO:K13279] [EC:1.11.1.24]
112078662  [KO:K08746] [EC:6.2.1.- 6.2.1.3]
112080250  [KO:K13273] [EC:2.7.4.2]
112080290  [KO:K13344]
112080512  [KO:K13352]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
salp00071  Fatty acid degradation
salp00120  Primary bile acid biosynthesis
salp00230  Purine metabolism
salp00564  Glycerophospholipid metabolism
salp00565  Ether lipid metabolism
salp00830  Retinol metabolism
salp00900  Terpenoid backbone biosynthesis
salp03320  PPAR signaling pathway
KO pathway
ko04146   

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